RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SRRTQ9BXP5 876 aaKnown RBP6.02□□□□□ -1.45
PROM1-220ENST00000540805 OSBPL5Q9H0X9 879 aaPredicted RBP6.02□□□□□ -1.45
PROM1-220ENST00000540805 KSR2Q6VAB6 950 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 ERC1Q8IUD2 1116 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 MNS1Q8NEH6 495 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 UBXN4Q92575 508 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 FAM227BQ96M60 508 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 ZHX3Q9H4I2 956 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 MAP3K2Q9Y2U5 619 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 MYH15Q9Y2K3 1946 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 CCP110O43303 1012 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 JAK2O60674 1132 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 SFPQP23246 707 aaKnown RBP eCLIP6.02□□□□□ -1.45
PROM1-220ENST00000540805 IGHMBP2P38935 993 aaKnown RBP6.02□□□□□ -1.45
PROM1-220ENST00000540805 EPHA10Q5JZY3 1008 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 E4F1Q66K89 784 aaPredicted RBP6.02□□□□□ -1.45
PROM1-220ENST00000540805 TMC6Q7Z403 805 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 HOMER1Q86YM7 354 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 IFNL2Q8IZJ0 200 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 ERCC4Q92889 916 aaPredicted RBP6.02□□□□□ -1.45
PROM1-220ENST00000540805 ATG3Q9NT62 314 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 HMG20BQ9P0W2 317 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 IQSEC3Q9UPP2 1182 aaPredicted RBP6.02□□□□□ -1.45
PROM1-220ENST00000540805 COL4A1P02462 1669 aa6.02□□□□□ -1.45
PROM1-220ENST00000540805 MINDY4BA8MYZ0 360 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 IRF6O14896 467 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 SASH3O75995 380 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 SMC2O95347 1197 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 USP5P45974 858 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 KCNJ6P48051 423 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 GPS2Q13227 327 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 ZSCAN26Q16670 478 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 TSR1Q2NL82 804 aaKnown RBP6.01□□□□□ -1.45
PROM1-220ENST00000540805 CCDC93Q567U6 631 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 ISM2Q6H9L7 571 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 SDF4Q9BRK5 362 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 SNRKQ9NRH2 765 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 DDX60Q8IY21 1712 aaKnown RBP6.01□□□□□ -1.45
PROM1-220ENST00000540805 RFX5P48382 616 aaPredicted RBP6.01□□□□□ -1.45
PROM1-220ENST00000540805 TDO2P48775 406 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 ZNF772Q68DY9 489 aaPredicted RBP6.01□□□□□ -1.45
PROM1-220ENST00000540805 PAF1Q8N7H5 531 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 DDX11Q96FC9 970 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 AK7Q96M32 723 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 GOLPH3LQ9H4A5 285 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 ORC3Q9UBD5 711 aaPredicted RBP6.01□□□□□ -1.45
PROM1-220ENST00000540805 NUP98P52948 1817 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 A0A087WZG4 1122 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 ZRANB2O95218 330 aaKnown RBP eCLIP6.01□□□□□ -1.45
PROM1-220ENST00000540805 TPM1P09493 284 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 CASQ1P31415 396 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 FAM160A1Q05DH4 1040 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 COL9A3Q14050 684 aaPredicted RBP6.01□□□□□ -1.45
PROM1-220ENST00000540805 KRT32Q14532 448 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 MUM1L1Q5H9M0 696 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 SUCLG2Q96I99 432 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 ZNF396Q96N95 335 aaPredicted RBP6.01□□□□□ -1.45
PROM1-220ENST00000540805 SLC4A9Q96Q91 983 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 JRKLQ9Y4A0 524 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 A0A1B0GUL6 1792 aa6.01□□□□□ -1.45
PROM1-220ENST00000540805 PHLPP2Q6ZVD8 1323 aa6□□□□□ -1.45
PROM1-220ENST00000540805 A0A0D9SFI3 127 aa6□□□□□ -1.45
PROM1-220ENST00000540805 NEURL1BA8MQ27 555 aa6□□□□□ -1.45
PROM1-220ENST00000540805 MPHOSPH10O00566 681 aaKnown RBP6□□□□□ -1.45
PROM1-220ENST00000540805 ATP8B1O43520 1251 aa6□□□□□ -1.45
PROM1-220ENST00000540805 ZFYVE27Q5T4F4 411 aa6□□□□□ -1.45
PROM1-220ENST00000540805 NBPF11Q86T75 865 aa6□□□□□ -1.45
PROM1-220ENST00000540805 FSIP1Q8NA03 581 aa6□□□□□ -1.45
PROM1-220ENST00000540805 CCDC8Q9H0W5 538 aaPredicted RBP6□□□□□ -1.45
PROM1-220ENST00000540805 BOLA2Q9H3K6 86 aa6□□□□□ -1.45
PROM1-220ENST00000540805 BCORQ6W2J9 1755 aa6□□□□□ -1.45
PROM1-220ENST00000540805 MED23Q9ULK4 1368 aa6□□□□□ -1.45
PROM1-220ENST00000540805 PPFIA3O75145 1194 aa6□□□□□ -1.45
PROM1-220ENST00000540805 SASH1O94885 1247 aa6□□□□□ -1.45
PROM1-220ENST00000540805 SSBP05455 408 aaKnown RBP eCLIP6□□□□□ -1.45
PROM1-220ENST00000540805 LMAN1P49257 510 aa6□□□□□ -1.45
PROM1-220ENST00000540805 RABEP2Q9H5N1 569 aa6□□□□□ -1.45
PROM1-220ENST00000540805 CWC15Q9P013 229 aaKnown RBP6□□□□□ -1.45
PROM1-220ENST00000540805 DNAI1Q9UI46 699 aa6□□□□□ -1.45
PROM1-220ENST00000540805 RCOR1Q9UKL0 485 aa6□□□□□ -1.45
PROM1-220ENST00000540805 RRP15Q9Y3B9 282 aaKnown RBP6□□□□□ -1.45
PROM1-220ENST00000540805 MYH14Q7Z406 1995 aaKnown RBP6□□□□□ -1.45
PROM1-220ENST00000540805 BCL9O00512 1426 aa6□□□□□ -1.45
PROM1-220ENST00000540805 PCDH11XQ9BZA7 1347 aa6□□□□□ -1.45
PROM1-220ENST00000540805 PCDH11YQ9BZA8 1340 aa6□□□□□ -1.45
PROM1-220ENST00000540805 ALDH1L1O75891 902 aa6□□□□□ -1.45
PROM1-220ENST00000540805 RFC4P35249 363 aa6□□□□□ -1.45
PROM1-220ENST00000540805 ETF1P62495 437 aaKnown RBP6□□□□□ -1.45
PROM1-220ENST00000540805 ARMCX5Q6P1M9 558 aa6□□□□□ -1.45
PROM1-220ENST00000540805 REXO1L1PQ8IX06 675 aa6□□□□□ -1.45
PROM1-220ENST00000540805 XPO4Q9C0E2 1151 aaKnown RBP6□□□□□ -1.45
PROM1-220ENST00000540805 EFCC1Q9HA90 598 aa6□□□□□ -1.45
PROM1-220ENST00000540805 TMOD2Q9NZR1 351 aa6□□□□□ -1.45
PROM1-220ENST00000540805 IFNKQ9P0W0 207 aa6□□□□□ -1.45
PROM1-220ENST00000540805 OAS2P29728 719 aaKnown RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 ME1P48163 572 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 RABL6Q3YEC7 729 aaPredicted RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 ATL3Q6DD88 541 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 UBE3BQ7Z3V4 1068 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 MYCBPQ99417 103 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms