RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 SNAPC2Q13487 334 aa18.95■□□□□ 0.62
UBE3B-211ENST00000539843 SPTY2D1Q68D10 685 aaPredicted RBP18.95■□□□□ 0.62
UBE3B-211ENST00000539843 INTS3Q68E01 1043 aaKnown RBP18.95■□□□□ 0.62
UBE3B-211ENST00000539843 OTOP1Q7RTM1 612 aa18.95■□□□□ 0.62
UBE3B-211ENST00000539843 DZIP1Q86YF9 867 aaKnown RBP18.95■□□□□ 0.62
UBE3B-211ENST00000539843 PA2G4Q9UQ80 394 aaKnown RBP18.95■□□□□ 0.62
UBE3B-211ENST00000539843 DAGLAQ9Y4D2 1042 aa18.95■□□□□ 0.62
UBE3B-211ENST00000539843 PRDX5P30044 214 aa18.94■□□□□ 0.62
UBE3B-211ENST00000539843 MVPQ14764 893 aaKnown RBP18.94■□□□□ 0.62
UBE3B-211ENST00000539843 KIF22Q14807 665 aa18.94■□□□□ 0.62
UBE3B-211ENST00000539843 CD99L2Q8TCZ2 262 aa18.94■□□□□ 0.62
UBE3B-211ENST00000539843 FRAT1Q92837 279 aaPredicted RBP18.94■□□□□ 0.62
UBE3B-211ENST00000539843 ZCCHC17Q9NP64 241 aaKnown RBP18.94■□□□□ 0.62
UBE3B-211ENST00000539843 PHKA1P46020 1223 aa18.93■□□□□ 0.62
UBE3B-211ENST00000539843 PPIL2Q13356 520 aa18.93■□□□□ 0.62
UBE3B-211ENST00000539843 DIXDC1Q155Q3 683 aa18.93■□□□□ 0.62
UBE3B-211ENST00000539843 GORABQ5T7V8 394 aa18.93■□□□□ 0.62
UBE3B-211ENST00000539843 CCDC102BQ68D86 513 aa18.93■□□□□ 0.62
UBE3B-211ENST00000539843 BRI3BPQ8WY22 251 aa18.93■□□□□ 0.62
UBE3B-211ENST00000539843 MS4A4AQ96JQ5 239 aa18.93■□□□□ 0.62
UBE3B-211ENST00000539843 PTPN18Q99952 460 aa18.93■□□□□ 0.62
UBE3B-211ENST00000539843 USP40Q9NVE5 1235 aa18.93■□□□□ 0.62
UBE3B-211ENST00000539843 MYH13Q9UKX3 1938 aa18.92■□□□□ 0.62
UBE3B-211ENST00000539843 OTOFQ9HC10 1997 aa18.92■□□□□ 0.62
UBE3B-211ENST00000539843 LAMB1P07942 1786 aa18.92■□□□□ 0.62
UBE3B-211ENST00000539843 GNAI2P04899 355 aa18.92■□□□□ 0.62
UBE3B-211ENST00000539843 PPATQ06203 517 aa18.92■□□□□ 0.62
UBE3B-211ENST00000539843 TCP10Q12799 353 aa18.92■□□□□ 0.62
UBE3B-211ENST00000539843 CDC42EP5Q6NZY7 148 aa18.92■□□□□ 0.62
UBE3B-211ENST00000539843 CNKSR2Q8WXI2 1034 aa18.92■□□□□ 0.62
UBE3B-211ENST00000539843 ABCF2Q9UG63 623 aa18.92■□□□□ 0.62
UBE3B-211ENST00000539843 SNCAIPQ9Y6H5 919 aa18.92■□□□□ 0.62
UBE3B-211ENST00000539843 ZBTB22O15209 634 aa18.91■□□□□ 0.62
UBE3B-211ENST00000539843 ATF7IPQ6VMQ6 1270 aa18.91■□□□□ 0.62
UBE3B-211ENST00000539843 MIGA2Q7L4E1 593 aa18.91■□□□□ 0.62
UBE3B-211ENST00000539843 ZKSCAN4Q969J2 545 aaPredicted RBP18.91■□□□□ 0.62
UBE3B-211ENST00000539843 PTPN22Q9Y2R2 807 aa18.91■□□□□ 0.62
UBE3B-211ENST00000539843 PDS5AQ29RF7 1337 aaKnown RBP18.91■□□□□ 0.62
UBE3B-211ENST00000539843 A0A1B0GUL7 405 aa18.9■□□□□ 0.62
UBE3B-211ENST00000539843 G3BP1Q13283 466 aaKnown RBP eCLIP18.9■□□□□ 0.62
UBE3B-211ENST00000539843 MTX1Q13505 466 aa18.9■□□□□ 0.62
UBE3B-211ENST00000539843 ZSCAN29Q8IWY8 852 aaPredicted RBP18.9■□□□□ 0.62
UBE3B-211ENST00000539843 NEUROD6Q96NK8 337 aa18.9■□□□□ 0.62
UBE3B-211ENST00000539843 IRF6O14896 467 aa18.89■□□□□ 0.61
UBE3B-211ENST00000539843 NBPF11Q86T75 865 aa18.89■□□□□ 0.61
UBE3B-211ENST00000539843 FAM43AQ8N2R8 423 aa18.89■□□□□ 0.61
UBE3B-211ENST00000539843 ENTPD3O75355 529 aa18.88■□□□□ 0.61
UBE3B-211ENST00000539843 TRIM27P14373 513 aa18.88■□□□□ 0.61
UBE3B-211ENST00000539843 ADORA1P30542 326 aa18.88■□□□□ 0.61
UBE3B-211ENST00000539843 TIMM10P62072 90 aa18.88■□□□□ 0.61
UBE3B-211ENST00000539843 GSTO1P78417 241 aa18.88■□□□□ 0.61
UBE3B-211ENST00000539843 TFCP2Q12800 502 aa18.88■□□□□ 0.61
UBE3B-211ENST00000539843 RASGRF1Q13972 1273 aa18.88■□□□□ 0.61
UBE3B-211ENST00000539843 ZKSCAN2Q63HK3 967 aa18.88■□□□□ 0.61
UBE3B-211ENST00000539843 ERICH6Q7L0X2 663 aa18.88■□□□□ 0.61
UBE3B-211ENST00000539843 XAGE2Q96GT9 111 aa18.88■□□□□ 0.61
UBE3B-211ENST00000539843 PICK1Q9NRD5 415 aa18.88■□□□□ 0.61
UBE3B-211ENST00000539843 TLR2O60603 784 aa18.87■□□□□ 0.61
UBE3B-211ENST00000539843 NFIAQ12857 509 aa18.87■□□□□ 0.61
UBE3B-211ENST00000539843 PRPF38BQ5VTL8 546 aaKnown RBP18.87■□□□□ 0.61
UBE3B-211ENST00000539843 FTSJ3Q8IY81 847 aaKnown RBP18.87■□□□□ 0.61
UBE3B-211ENST00000539843 TMEM106CQ9BVX2 250 aa18.87■□□□□ 0.61
UBE3B-211ENST00000539843 GAKO14976 1311 aa18.86■□□□□ 0.61
UBE3B-211ENST00000539843 BTBD19C9JJ37 291 aa18.86■□□□□ 0.61
UBE3B-211ENST00000539843 GNRH1P01148 92 aa18.86■□□□□ 0.61
UBE3B-211ENST00000539843 LDHCP07864 332 aa18.86■□□□□ 0.61
UBE3B-211ENST00000539843 INPP5BP32019 993 aa18.86■□□□□ 0.61
UBE3B-211ENST00000539843 OS9Q13438 667 aaPredicted RBP18.86■□□□□ 0.61
UBE3B-211ENST00000539843 SLC9C1Q4G0N8 1177 aa18.86■□□□□ 0.61
UBE3B-211ENST00000539843 NOL9Q5SY16 702 aaKnown RBP18.86■□□□□ 0.61
UBE3B-211ENST00000539843 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.86■□□□□ 0.61
UBE3B-211ENST00000539843 CLUAP1Q96AJ1 413 aa18.86■□□□□ 0.61
UBE3B-211ENST00000539843 IDI2Q9BXS1 227 aa18.86■□□□□ 0.61
UBE3B-211ENST00000539843 ZNF112Q9UJU3 913 aa18.86■□□□□ 0.61
UBE3B-211ENST00000539843 BTDP43251 543 aa18.85■□□□□ 0.61
UBE3B-211ENST00000539843 RGS3P49796 1198 aa18.85■□□□□ 0.61
UBE3B-211ENST00000539843 ANKRD23Q86SG2 305 aa18.85■□□□□ 0.61
UBE3B-211ENST00000539843 NOL10Q9BSC4 688 aaKnown RBP18.85■□□□□ 0.61
UBE3B-211ENST00000539843 FAM198AQ9UFP1 575 aa18.85■□□□□ 0.61
UBE3B-211ENST00000539843 MROH7-TTC4A0A0A0MT08 1334 aa18.84■□□□□ 0.61
UBE3B-211ENST00000539843 BCAR3O75815 825 aa18.84■□□□□ 0.61
UBE3B-211ENST00000539843 MAP4K4O95819 1239 aaPredicted RBP18.84■□□□□ 0.61
UBE3B-211ENST00000539843 UQCRFS1P1P0C7P4 283 aa18.84■□□□□ 0.61
UBE3B-211ENST00000539843 PRMT2P55345 433 aa18.84■□□□□ 0.61
UBE3B-211ENST00000539843 HNRNPUQ00839 825 aaKnown RBP eCLIP18.84■□□□□ 0.61
UBE3B-211ENST00000539843 PICALMQ13492 652 aa18.84■□□□□ 0.61
UBE3B-211ENST00000539843 ARMC5Q96C12 935 aa18.84■□□□□ 0.61
UBE3B-211ENST00000539843 FAM163AQ96GL9 167 aaPredicted RBP18.84■□□□□ 0.61
UBE3B-211ENST00000539843 PARK7Q99497 189 aaKnown RBP18.84■□□□□ 0.61
UBE3B-211ENST00000539843 PDE4DIPQ5VU43 2346 aa18.83■□□□□ 0.61
UBE3B-211ENST00000539843 CXCL11O14625 94 aa18.83■□□□□ 0.6
UBE3B-211ENST00000539843 HOXD10P28358 340 aa18.83■□□□□ 0.6
UBE3B-211ENST00000539843 SCYL3Q8IZE3 742 aa18.83■□□□□ 0.6
UBE3B-211ENST00000539843 SPATA5Q8NB90 893 aa18.83■□□□□ 0.6
UBE3B-211ENST00000539843 RAI14Q9P0K7 980 aa18.83■□□□□ 0.6
UBE3B-211ENST00000539843 KCNH4Q9UQ05 1017 aa18.83■□□□□ 0.6
UBE3B-211ENST00000539843 PDHXO00330 501 aa18.82■□□□□ 0.6
UBE3B-211ENST00000539843 LACTBP83111 547 aaPredicted RBP18.82■□□□□ 0.6
UBE3B-211ENST00000539843 CCDC158Q5M9N0 1113 aa18.82■□□□□ 0.6
UBE3B-211ENST00000539843 FASTKD5Q7L8L6 764 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 941.9 ms