RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 IFNL3Q8IZI9 196 aa20.22■□□□□ 0.83
VPS51-216ENST00000534591 EYA3Q99504 573 aa20.22■□□□□ 0.83
VPS51-216ENST00000534591 ANP32EQ9BTT0 268 aa20.22■□□□□ 0.83
VPS51-216ENST00000534591 ZNF277Q9NRM2 450 aaPredicted RBP20.22■□□□□ 0.83
VPS51-216ENST00000534591 SLC4A4Q9Y6R1 1079 aa20.22■□□□□ 0.83
VPS51-216ENST00000534591 WDR90Q96KV7 1748 aa20.22■□□□□ 0.83
VPS51-216ENST00000534591 C1QTNF8P60827 252 aa20.22■□□□□ 0.83
VPS51-216ENST00000534591 GSTO1P78417 241 aa20.22■□□□□ 0.83
VPS51-216ENST00000534591 ADGRA1Q86SQ6 560 aa20.22■□□□□ 0.83
VPS51-216ENST00000534591 MIGA1Q8NAN2 632 aa20.22■□□□□ 0.83
VPS51-216ENST00000534591 ZNF384Q8TF68 577 aa20.22■□□□□ 0.83
VPS51-216ENST00000534591 TBC1D22AQ8WUA7 517 aa20.22■□□□□ 0.83
VPS51-216ENST00000534591 RIOK1Q9BRS2 568 aaKnown RBP20.22■□□□□ 0.83
VPS51-216ENST00000534591 ZC3H12CQ9C0D7 883 aaKnown RBP20.22■□□□□ 0.83
VPS51-216ENST00000534591 NAPBQ9H115 298 aa20.22■□□□□ 0.83
VPS51-216ENST00000534591 LAMA4Q16363 1823 aa20.21■□□□□ 0.83
VPS51-216ENST00000534591 FAM205AQ6ZU69 1335 aa20.21■□□□□ 0.83
VPS51-216ENST00000534591 ZC3H4Q9UPT8 1303 aaKnown RBP20.21■□□□□ 0.83
VPS51-216ENST00000534591 PRDX5P30044 214 aa20.21■□□□□ 0.83
VPS51-216ENST00000534591 NUCB2P80303 420 aa20.21■□□□□ 0.83
VPS51-216ENST00000534591 EXOSC10Q01780 885 aaKnown RBP20.21■□□□□ 0.83
VPS51-216ENST00000534591 TOB2Q14106 344 aaPredicted RBP20.21■□□□□ 0.83
VPS51-216ENST00000534591 CC2D2BQ6DHV5 1058 aa20.21■□□□□ 0.83
VPS51-216ENST00000534591 DZIP1Q86YF9 867 aaKnown RBP20.21■□□□□ 0.83
VPS51-216ENST00000534591 HAND2P61296 217 aa20.2■□□□□ 0.82
VPS51-216ENST00000534591 GIMAP6Q6P9H5 292 aa20.2■□□□□ 0.82
VPS51-216ENST00000534591 FBXL16Q8N461 479 aa20.2■□□□□ 0.82
VPS51-216ENST00000534591 NCOA7Q8NI08 942 aa20.2■□□□□ 0.82
VPS51-216ENST00000534591 EPB41L4AQ9HCS5 686 aaPredicted RBP20.2■□□□□ 0.82
VPS51-216ENST00000534591 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.2■□□□□ 0.82
VPS51-216ENST00000534591 WDR19Q8NEZ3 1342 aa20.19■□□□□ 0.82
VPS51-216ENST00000534591 LDHCP07864 332 aa20.19■□□□□ 0.82
VPS51-216ENST00000534591 COL9A3Q14050 684 aaPredicted RBP20.19■□□□□ 0.82
VPS51-216ENST00000534591 RAB3GAP1Q15042 981 aa20.19■□□□□ 0.82
VPS51-216ENST00000534591 RTKN2Q8IZC4 609 aa20.19■□□□□ 0.82
VPS51-216ENST00000534591 AGXT2Q9BYV1 514 aa20.19■□□□□ 0.82
VPS51-216ENST00000534591 TPCN1Q9ULQ1 816 aa20.19■□□□□ 0.82
VPS51-216ENST00000534591 CEP350Q5VT06 3117 aa20.18■□□□□ 0.82
VPS51-216ENST00000534591 PRKAB2O43741 272 aa20.18■□□□□ 0.82
VPS51-216ENST00000534591 TDO2P48775 406 aa20.18■□□□□ 0.82
VPS51-216ENST00000534591 TRDNQ13061 729 aa20.18■□□□□ 0.82
VPS51-216ENST00000534591 NFKBIBQ15653 356 aa20.18■□□□□ 0.82
VPS51-216ENST00000534591 GRIPAP1Q4V328 841 aa20.18■□□□□ 0.82
VPS51-216ENST00000534591 Q6ZUG5 572 aa20.18■□□□□ 0.82
VPS51-216ENST00000534591 RALYLQ86SE5 291 aaKnown RBP20.18■□□□□ 0.82
VPS51-216ENST00000534591 TCEANC2Q96MN5 208 aa20.18■□□□□ 0.82
VPS51-216ENST00000534591 FGD1P98174 961 aa20.17■□□□□ 0.82
VPS51-216ENST00000534591 CERS3Q8IU89 383 aa20.17■□□□□ 0.82
VPS51-216ENST00000534591 LARP6Q9BRS8 491 aaKnown RBP20.17■□□□□ 0.82
VPS51-216ENST00000534591 RTFDC1Q9BY42 306 aaPredicted RBP20.17■□□□□ 0.82
VPS51-216ENST00000534591 JAG2Q9Y219 1238 aa20.17■□□□□ 0.82
VPS51-216ENST00000534591 GLTPD2A6NH11 291 aa20.17■□□□□ 0.82
VPS51-216ENST00000534591 MCM5P33992 734 aa20.17■□□□□ 0.82
VPS51-216ENST00000534591 ME3Q16798 604 aa20.17■□□□□ 0.82
VPS51-216ENST00000534591 MB21D2Q8IYB1 491 aaPredicted RBP20.17■□□□□ 0.82
VPS51-216ENST00000534591 PSMD1Q99460 953 aa20.17■□□□□ 0.82
VPS51-216ENST00000534591 CRNKL1Q9BZJ0 848 aaKnown RBP20.17■□□□□ 0.82
VPS51-216ENST00000534591 NBPF3Q9H094 633 aa20.17■□□□□ 0.82
VPS51-216ENST00000534591 RRAGCQ9HB90 399 aa20.17■□□□□ 0.82
VPS51-216ENST00000534591 SUGT1Q9Y2Z0 365 aa20.17■□□□□ 0.82
VPS51-216ENST00000534591 ZNF541Q9H0D2 1346 aa20.16■□□□□ 0.82
VPS51-216ENST00000534591 RIMBP2O15034 1052 aa20.16■□□□□ 0.82
VPS51-216ENST00000534591 LARGE1O95461 756 aa20.16■□□□□ 0.82
VPS51-216ENST00000534591 IARSP41252 1262 aaKnown RBP20.16■□□□□ 0.82
VPS51-216ENST00000534591 DYNLL1P63167 89 aaKnown RBP20.16■□□□□ 0.82
VPS51-216ENST00000534591 TBC1D10CQ8IV04 446 aa20.16■□□□□ 0.82
VPS51-216ENST00000534591 SLF2Q8IX21 1173 aa20.16■□□□□ 0.82
VPS51-216ENST00000534591 CNNM2Q9H8M5 875 aa20.16■□□□□ 0.82
VPS51-216ENST00000534591 SCN4AP35499 1836 aa20.15■□□□□ 0.82
VPS51-216ENST00000534591 ATP8A2Q9NTI2 1148 aa20.15■□□□□ 0.82
VPS51-216ENST00000534591 ANAPC4Q9UJX5 808 aa20.15■□□□□ 0.82
VPS51-216ENST00000534591 G3V3G9 751 aa20.14■□□□□ 0.81
VPS51-216ENST00000534591 BAG3O95817 575 aa20.14■□□□□ 0.81
VPS51-216ENST00000534591 PPP4CP60510 307 aa20.14■□□□□ 0.81
VPS51-216ENST00000534591 NBR1Q14596 966 aa20.14■□□□□ 0.81
VPS51-216ENST00000534591 MFSD14BQ5SR56 506 aa20.14■□□□□ 0.81
VPS51-216ENST00000534591 AKNAD1Q5T1N1 836 aa20.14■□□□□ 0.81
VPS51-216ENST00000534591 DCAF8Q5TAQ9 597 aa20.14■□□□□ 0.81
VPS51-216ENST00000534591 CCDC83Q8IWF9 413 aa20.14■□□□□ 0.81
VPS51-216ENST00000534591 SUPT20HQ8NEM7 779 aa20.14■□□□□ 0.81
VPS51-216ENST00000534591 STAG1Q8WVM7 1258 aa20.14■□□□□ 0.81
VPS51-216ENST00000534591 BRF1Q92994 677 aa20.14■□□□□ 0.81
VPS51-216ENST00000534591 CHMP4CQ96CF2 233 aa20.14■□□□□ 0.81
VPS51-216ENST00000534591 NOL10Q9BSC4 688 aaKnown RBP20.14■□□□□ 0.81
VPS51-216ENST00000534591 RNF41Q9H4P4 317 aaPredicted RBP20.14■□□□□ 0.81
VPS51-216ENST00000534591 SMC3Q9UQE7 1217 aa20.14■□□□□ 0.81
VPS51-216ENST00000534591 POTECB2RU33 542 aa20.13■□□□□ 0.81
VPS51-216ENST00000534591 PRC1O43663 620 aa20.13■□□□□ 0.81
VPS51-216ENST00000534591 SDR42E1Q8WUS8 393 aa20.13■□□□□ 0.81
VPS51-216ENST00000534591 FAM163AQ96GL9 167 aaPredicted RBP20.13■□□□□ 0.81
VPS51-216ENST00000534591 KRT23Q9C075 422 aa20.13■□□□□ 0.81
VPS51-216ENST00000534591 AATFQ9NY61 560 aaKnown RBP eCLIP20.13■□□□□ 0.81
VPS51-216ENST00000534591 MROH7-TTC4A0A0A0MT08 1334 aa20.13■□□□□ 0.81
VPS51-216ENST00000534591 DDNO94850 711 aaPredicted RBP20.12■□□□□ 0.81
VPS51-216ENST00000534591 EVCP57679 992 aa20.12■□□□□ 0.81
VPS51-216ENST00000534591 GTF2IP78347 998 aa20.12■□□□□ 0.81
VPS51-216ENST00000534591 PODNQ7Z5L7 613 aa20.12■□□□□ 0.81
VPS51-216ENST00000534591 TNPO1Q92973 898 aaKnown RBP20.12■□□□□ 0.81
VPS51-216ENST00000534591 PCP11498 1178 aaKnown RBP20.12■□□□□ 0.81
VPS51-216ENST00000534591 PPARAQ07869 468 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms