RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 ZNF496Q96IT1 587 aaPredicted RBP7.21□□□□□ -1.26
UBQLN1-206ENST00000533705 ZSCAN23Q3MJ62 389 aa7.21□□□□□ -1.26
UBQLN1-206ENST00000533705 SV2BQ7L1I2 683 aa7.21□□□□□ -1.26
UBQLN1-206ENST00000533705 ZSWIM4Q9H7M6 989 aa7.21□□□□□ -1.26
UBQLN1-206ENST00000533705 TRPC5Q9UL62 973 aaPredicted RBP7.21□□□□□ -1.26
UBQLN1-206ENST00000533705 TACC1O75410 805 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 RPS8P62241 208 aaKnown RBP7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 ZNF174Q15697 407 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 CCDC129Q6ZRS4 1044 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 FNBP1Q96RU3 617 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 TRIM6Q9C030 488 aaPredicted RBP7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 ERVV-2B6SEH9 535 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 DKC1O60832 514 aaKnown RBP eCLIP7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 RXRBP28702 533 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 CCT6AP40227 531 aaKnown RBP7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 SMTNP53814 917 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 STX17P56962 302 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 SREK1Q8WXA9 508 aaKnown RBP7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 CCDC42Q96M95 316 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 DNAJC25Q9H1X3 360 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 MROH5Q6ZUA9 1318 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 VWA3AA6NCI4 1184 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 DDX39AO00148 427 aaKnown RBP7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 GPAA1O43292 621 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 DEXIO95424 95 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 CTR9Q6PD62 1173 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 CCDC155Q8N6L0 562 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 TGFBRAP1Q8WUH2 860 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 AZI2Q9H6S1 392 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 RASAL2Q9UJF2 1139 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 SHANK2Q9UPX8 1470 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 PLCD1P51178 756 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 USH1GQ495M9 461 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 HAUS3Q68CZ6 603 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 SMC5Q8IY18 1101 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 CEP112Q8N8E3 955 aa7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 TTF2Q9UNY4 1162 aaKnown RBP7.2□□□□□ -1.26
UBQLN1-206ENST00000533705 ERICH4A6NGS2 130 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 CHL1O00533 1208 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 KRT83P78385 493 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 GCKRQ14397 625 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 RILPL1Q5EBL4 403 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 IFT74Q96LB3 600 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 PAGR1Q9BTK6 254 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 IQCGQ9H095 443 aaKnown RBP7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 USP40Q9NVE5 1235 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 CGNQ9P2M7 1197 aaKnown RBP7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 FRMD4BQ9Y2L6 1034 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 COL17A1Q9UMD9 1497 aaPredicted RBP7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 ATP2A1O14983 1001 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 KIF5AQ12840 1032 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 TNFAIP1Q13829 316 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 KIF22Q14807 665 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 DCAF17Q5H9S7 520 aaPredicted RBP7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 GSTA5Q7RTV2 222 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 CCDC50Q8IVM0 306 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 SNX21Q969T3 373 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 ADAMTS12P58397 1594 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 UBXN1Q04323 297 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 MFSD14BQ5SR56 506 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 SPOUT1Q5T280 376 aaKnown RBP7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 SPATA5Q8NB90 893 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 V9GY48 417 aaPredicted RBP7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 TMEM2Q9UHN6 1383 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 A0A1W2PRG0 241 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 CFBP00751 764 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 SKILP12757 684 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 SLC8A3P57103 927 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 WDR44Q5JSH3 913 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 CEP135Q66GS9 1140 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 SUCLG2Q96I99 432 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 CCDC77Q9BR77 488 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 SPC25Q9HBM1 224 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 ANGEL1Q9UNK9 670 aaKnown RBP7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 ZBTB7BO15156 539 aaPredicted RBP7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 TRIM37O94972 964 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 ZNF772Q68DY9 489 aaPredicted RBP7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 MAEAQ7L5Y9 396 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 FMNL3Q8IVF7 1028 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 TEKT1Q969V4 418 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 DCPSQ96C86 337 aaKnown RBP7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 USP19O94966 1318 aa7.19□□□□□ -1.26
UBQLN1-206ENST00000533705 M0QZ92 97 aa7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 TRAF5O00463 557 aa7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 KRT86O43790 486 aa7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 LPXNO60711 386 aa7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 STRN3Q13033 797 aa7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 DOK7Q18PE1 504 aa7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 SULF1Q8IWU6 871 aa7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 RNF216Q9NWF9 866 aaPredicted RBP7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 PLEKHG3A1L390 1219 aa7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 CTAGE15A4D2H0 777 aa7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 CCNT1O60563 726 aaKnown RBP7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 CTAGE8P0CG41 777 aa7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 SYT1P21579 422 aa7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 PPP1R2P41236 205 aa7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 FAM47CQ5HY64 1035 aa7.18□□□□□ -1.26
UBQLN1-206ENST00000533705 EP400NLQ6ZTU2 488 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms