RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 RGS22Q8NE09 1264 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 TMEM87BQ96K49 555 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 LY9Q9HBG7 655 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 TAF1P21675 1872 aa20.49■□□□□ 0.87
USH1C-205ENST00000527020 GOLGA6L6A8MZA4 724 aa20.48■□□□□ 0.87
USH1C-205ENST00000527020 ARMT1Q9H993 441 aa20.48■□□□□ 0.87
USH1C-205ENST00000527020 NIP7Q9Y221 180 aaKnown RBP eCLIP20.48■□□□□ 0.87
USH1C-205ENST00000527020 A0A087WWV3 80 aa20.48■□□□□ 0.87
USH1C-205ENST00000527020 UQCRHLA0A096LP55 91 aa20.48■□□□□ 0.87
USH1C-205ENST00000527020 GSG1L2A8MUP6 293 aa20.48■□□□□ 0.87
USH1C-205ENST00000527020 UQCRHP07919 91 aa20.48■□□□□ 0.87
USH1C-205ENST00000527020 PTGS1P23219 599 aa20.48■□□□□ 0.87
USH1C-205ENST00000527020 CTDSPL2Q05D32 466 aa20.48■□□□□ 0.87
USH1C-205ENST00000527020 FAM217BQ9NTX9 383 aaPredicted RBP20.48■□□□□ 0.87
USH1C-205ENST00000527020 A0A1B0GVL5 298 aa20.47■□□□□ 0.87
USH1C-205ENST00000527020 NDUFA8P51970 172 aa20.47■□□□□ 0.87
USH1C-205ENST00000527020 STK38Q15208 465 aa20.47■□□□□ 0.87
USH1C-205ENST00000527020 NTRK3Q16288 839 aa20.47■□□□□ 0.87
USH1C-205ENST00000527020 SGMS1Q86VZ5 419 aa20.47■□□□□ 0.87
USH1C-205ENST00000527020 KCNG4Q8TDN1 519 aa20.47■□□□□ 0.87
USH1C-205ENST00000527020 TRIM5Q9C035 493 aa20.47■□□□□ 0.87
USH1C-205ENST00000527020 SPATA31A5Q5VU36 1347 aa20.47■□□□□ 0.87
USH1C-205ENST00000527020 SPATA31A7Q8IWB4 1347 aa20.47■□□□□ 0.87
USH1C-205ENST00000527020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.46■□□□□ 0.87
USH1C-205ENST00000527020 NAPBQ9H115 298 aa20.46■□□□□ 0.87
USH1C-205ENST00000527020 SPTLC2O15270 562 aa20.46■□□□□ 0.87
USH1C-205ENST00000527020 PRKAB2O43741 272 aa20.46■□□□□ 0.87
USH1C-205ENST00000527020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.46■□□□□ 0.87
USH1C-205ENST00000527020 ERCC4Q92889 916 aaPredicted RBP20.46■□□□□ 0.87
USH1C-205ENST00000527020 ALG1Q9BT22 464 aa20.46■□□□□ 0.87
USH1C-205ENST00000527020 ZSWIM5Q9P217 1185 aa20.46■□□□□ 0.87
USH1C-205ENST00000527020 IGHMBP2P38935 993 aaKnown RBP20.45■□□□□ 0.86
USH1C-205ENST00000527020 CHRNDQ07001 517 aa20.45■□□□□ 0.86
USH1C-205ENST00000527020 AXDND1Q5T1B0 1012 aaPredicted RBP20.45■□□□□ 0.86
USH1C-205ENST00000527020 ANO1Q5XXA6 986 aa20.45■□□□□ 0.86
USH1C-205ENST00000527020 MICU3Q86XE3 530 aa20.45■□□□□ 0.86
USH1C-205ENST00000527020 LCORLQ8N3X6 602 aa20.45■□□□□ 0.86
USH1C-205ENST00000527020 PHKBQ93100 1093 aa20.45■□□□□ 0.86
USH1C-205ENST00000527020 NRBP1Q9UHY1 535 aa20.45■□□□□ 0.86
USH1C-205ENST00000527020 PNPLA7Q6ZV29 1317 aa20.45■□□□□ 0.86
USH1C-205ENST00000527020 ZBTB43O43298 467 aa20.45■□□□□ 0.86
USH1C-205ENST00000527020 RANBP6O60518 1105 aaKnown RBP20.45■□□□□ 0.86
USH1C-205ENST00000527020 CCDC186Q7Z3E2 898 aa20.45■□□□□ 0.86
USH1C-205ENST00000527020 CCDC144CPQ8IYA2 1237 aa20.45■□□□□ 0.86
USH1C-205ENST00000527020 MYL10Q9BUA6 226 aa20.45■□□□□ 0.86
USH1C-205ENST00000527020 ZNF831Q5JPB2 1677 aa20.44■□□□□ 0.86
USH1C-205ENST00000527020 LIFRP42702 1097 aa20.44■□□□□ 0.86
USH1C-205ENST00000527020 TMEM67Q5HYA8 995 aa20.44■□□□□ 0.86
USH1C-205ENST00000527020 SARM1Q6SZW1 724 aa20.44■□□□□ 0.86
USH1C-205ENST00000527020 DHX40Q8IX18 779 aaKnown RBP20.44■□□□□ 0.86
USH1C-205ENST00000527020 KCNQ2O43526 872 aa20.44■□□□□ 0.86
USH1C-205ENST00000527020 CDKL5O76039 1030 aa20.44■□□□□ 0.86
USH1C-205ENST00000527020 SF3A1Q15459 793 aaKnown RBP20.44■□□□□ 0.86
USH1C-205ENST00000527020 AKNAD1Q5T1N1 836 aa20.44■□□□□ 0.86
USH1C-205ENST00000527020 KRT40Q6A162 431 aa20.44■□□□□ 0.86
USH1C-205ENST00000527020 VPS37DQ86XT2 251 aa20.43■□□□□ 0.86
USH1C-205ENST00000527020 ANO10Q9NW15 660 aa20.43■□□□□ 0.86
USH1C-205ENST00000527020 UBE2Q2LH0YL09 131 aa20.42■□□□□ 0.86
USH1C-205ENST00000527020 CDC25BP30305 580 aa20.42■□□□□ 0.86
USH1C-205ENST00000527020 DNTTIP2Q5QJE6 756 aaKnown RBP20.42■□□□□ 0.86
USH1C-205ENST00000527020 SYNE3Q6ZMZ3 975 aa20.42■□□□□ 0.86
USH1C-205ENST00000527020 NFXL1Q6ZNB6 911 aa20.42■□□□□ 0.86
USH1C-205ENST00000527020 GOLGA8AA7E2F4 631 aa20.42■□□□□ 0.86
USH1C-205ENST00000527020 WDHD1O75717 1129 aaPredicted RBP20.42■□□□□ 0.86
USH1C-205ENST00000527020 BARGINQ6ZT62 677 aa20.42■□□□□ 0.86
USH1C-205ENST00000527020 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
USH1C-205ENST00000527020 STAG1Q8WVM7 1258 aa20.42■□□□□ 0.86
USH1C-205ENST00000527020 SLC4A4Q9Y6R1 1079 aa20.42■□□□□ 0.86
USH1C-205ENST00000527020 NID2Q14112 1375 aa20.42■□□□□ 0.86
USH1C-205ENST00000527020 MROH7-TTC4A0A0A0MT08 1334 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 CACNA1SQ13698 1873 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 LTBP4Q8N2S1 1624 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 IFIT3O14879 490 aaKnown RBP20.41■□□□□ 0.86
USH1C-205ENST00000527020 LRMPQ12912 555 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 SLC39A14Q15043 492 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 ADGRA1Q86SQ6 560 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 CNNM2Q9H8M5 875 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 COL1A1P02452 1464 aaPredicted RBP20.41■□□□□ 0.86
USH1C-205ENST00000527020 ZNF804BA4D1E1 1349 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 WTIPA6NIX2 430 aaPredicted RBP20.41■□□□□ 0.86
USH1C-205ENST00000527020 GOLGA6L19H0YKK7 550 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 RRP9O43818 475 aaKnown RBP20.41■□□□□ 0.86
USH1C-205ENST00000527020 GNAT2P19087 354 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 CCDC144BQ3MJ40 725 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 CPLX2Q6PUV4 134 aaKnown RBP20.41■□□□□ 0.86
USH1C-205ENST00000527020 MFSD6Q6ZSS7 791 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 DRC7Q8IY82 874 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 SDF4Q9BRK5 362 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 KRT23Q9C075 422 aa20.41■□□□□ 0.86
USH1C-205ENST00000527020 CMA1P23946 247 aa20.4■□□□□ 0.86
USH1C-205ENST00000527020 IARSP41252 1262 aaKnown RBP20.4■□□□□ 0.86
USH1C-205ENST00000527020 PTPAQ15257 358 aa20.4■□□□□ 0.86
USH1C-205ENST00000527020 MIGA1Q8NAN2 632 aa20.4■□□□□ 0.86
USH1C-205ENST00000527020 KIAA1468Q9P260 1216 aa20.4■□□□□ 0.86
USH1C-205ENST00000527020 CLIP2Q9UDT6 1046 aa20.4■□□□□ 0.86
USH1C-205ENST00000527020 SCN7AQ01118 1682 aa20.4■□□□□ 0.86
USH1C-205ENST00000527020 TDO2P48775 406 aa20.39■□□□□ 0.86
USH1C-205ENST00000527020 ERFEQ4G0M1 354 aa20.39■□□□□ 0.86
USH1C-205ENST00000527020 LINC00116Q8NCU8 138 aa20.39■□□□□ 0.86
USH1C-205ENST00000527020 IQSEC3Q9UPP2 1182 aaPredicted RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms