RNA–Protein interactions for RNA: ENST00000522020.1

MCPH1-206, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-206ENST00000522020 SOX17Q9H6I2 414 aaPredicted RBP3.44□□□□□ -1.86
MCPH1-206ENST00000522020 A0A1W2PP55 124 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 CYP26A1O43174 497 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 ADAM11O75078 769 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 MAP4P27816 1152 aaKnown RBP3.43□□□□□ -1.86
MCPH1-206ENST00000522020 NLRP12P59046 1061 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 ZNF792Q3KQV3 632 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 KIAA0319Q5VV43 1072 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 HGSNATQ68CP4 663 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 ATG4DQ86TL0 474 aaPredicted RBP3.43□□□□□ -1.86
MCPH1-206ENST00000522020 ANKLE2Q86XL3 938 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 WFDC3Q8IUB2 231 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 CCNJLQ8IV13 435 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 UBASH3BQ8TF42 649 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 RUSC1Q9BVN2 902 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 DNAJC25Q9H1X3 360 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 LATS2Q9NRM7 1088 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 PITPNM2Q9BZ72 1349 aa3.43□□□□□ -1.86
MCPH1-206ENST00000522020 A0A096LPE4 126 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 A0A1W2PPZ6 126 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 CPNE3O75131 537 aaKnown RBP3.42□□□□□ -1.86
MCPH1-206ENST00000522020 BRD1O95696 1058 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 TSPAN15O95858 294 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 ESRRAP11474 423 aaPredicted RBP3.42□□□□□ -1.86
MCPH1-206ENST00000522020 SGO2Q562F6 1265 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 EXOSC6Q5RKV6 272 aaKnown RBP3.42□□□□□ -1.86
MCPH1-206ENST00000522020 NUTM2GQ5VZR2 741 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 FDX2Q6P4F2 183 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 AMIGO3Q86WK7 504 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 C12orf50Q8NA57 414 aaPredicted RBP3.42□□□□□ -1.86
MCPH1-206ENST00000522020 GLIS3Q8NEA6 775 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 DDX54Q8TDD1 881 aaKnown RBP3.42□□□□□ -1.86
MCPH1-206ENST00000522020 TMC1Q8TDI8 760 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 DMRTB1Q96MA1 342 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 FAM129BQ96TA1 746 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 TCF12Q99081 682 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 METTL22Q9BUU2 404 aaPredicted RBP3.42□□□□□ -1.86
MCPH1-206ENST00000522020 RBCK1Q9BYM8 510 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 CLEC4MQ9H2X3 399 aaPredicted RBP3.42□□□□□ -1.86
MCPH1-206ENST00000522020 LIN7BQ9HAP6 207 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 ZFYVE1Q9HBF4 777 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 CYP4F12Q9HCS2 524 aa3.42□□□□□ -1.86
MCPH1-206ENST00000522020 GNEQ9Y223 722 aaKnown RBP3.42□□□□□ -1.86
MCPH1-206ENST00000522020 A0A0G2JLL6 359 aaPredicted RBP3.41□□□□□ -1.86
MCPH1-206ENST00000522020 SOWAHDA6NJG2 315 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 METTL12A8MUP2 240 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 CYP11A1P05108 521 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 TGM1P22735 817 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 GRIA4P48058 902 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 GSTM4Q03013 218 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 PCDH1Q08174 1060 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 ORC1Q13415 861 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 SPRED3Q2MJR0 410 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 SMG8Q8ND04 991 aaKnown RBP3.41□□□□□ -1.86
MCPH1-206ENST00000522020 CCDC74AQ96AQ1 378 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 USP26Q9BXU7 913 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 TMPRSS13Q9BYE2 586 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 NIF3L1Q9GZT8 377 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 EHD4Q9H223 541 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 SUGCTQ9HAC7 445 aa3.41□□□□□ -1.86
MCPH1-206ENST00000522020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.41□□□□□ -1.86
MCPH1-206ENST00000522020 LOC100289279A0A1B0GTE1 492 aa3.4□□□□□ -1.87
MCPH1-206ENST00000522020 EIF1AYO14602 144 aaKnown RBP3.4□□□□□ -1.87
MCPH1-206ENST00000522020 GAS2O43903 313 aaKnown RBP3.4□□□□□ -1.87
MCPH1-206ENST00000522020 ADMP35318 185 aa3.4□□□□□ -1.87
MCPH1-206ENST00000522020 PTPN12Q05209 780 aaKnown RBP3.4□□□□□ -1.87
MCPH1-206ENST00000522020 PLCL1Q15111 1095 aa3.4□□□□□ -1.87
MCPH1-206ENST00000522020 ZNF423Q2M1K9 1284 aa3.4□□□□□ -1.87
MCPH1-206ENST00000522020 HP1BP3Q5SSJ5 553 aaPredicted RBP3.4□□□□□ -1.87
MCPH1-206ENST00000522020 USPL1Q5W0Q7 1092 aa3.4□□□□□ -1.87
MCPH1-206ENST00000522020 ZNF574Q6ZN55 896 aaPredicted RBP3.4□□□□□ -1.87
MCPH1-206ENST00000522020 ALKBH8Q96BT7 664 aaKnown RBP3.4□□□□□ -1.87
MCPH1-206ENST00000522020 PPP4R2Q9NY27 417 aa3.4□□□□□ -1.87
MCPH1-206ENST00000522020 ZC3H7BQ9UGR2 993 aaKnown RBP3.4□□□□□ -1.87
MCPH1-206ENST00000522020 GADD45BO75293 160 aaPredicted RBP3.39□□□□□ -1.87
MCPH1-206ENST00000522020 TIAF1O95411 115 aa3.39□□□□□ -1.87
MCPH1-206ENST00000522020 DLGAP3O95886 979 aa3.39□□□□□ -1.87
MCPH1-206ENST00000522020 SYN1P17600 705 aa3.39□□□□□ -1.87
MCPH1-206ENST00000522020 ITPKAP23677 461 aa3.39□□□□□ -1.87
MCPH1-206ENST00000522020 MAOBP27338 520 aa3.39□□□□□ -1.87
MCPH1-206ENST00000522020 USP11P51784 963 aa3.39□□□□□ -1.87
MCPH1-206ENST00000522020 PLCB3Q01970 1234 aa3.39□□□□□ -1.87
MCPH1-206ENST00000522020 SOX4Q06945 474 aaPredicted RBP3.39□□□□□ -1.87
MCPH1-206ENST00000522020 POU4F3Q15319 338 aa3.39□□□□□ -1.87
MCPH1-206ENST00000522020 SKOR2Q2VWA4 1001 aaPredicted RBP3.39□□□□□ -1.87
MCPH1-206ENST00000522020 RPS26P11Q5JNZ5 115 aaPredicted RBP3.39□□□□□ -1.87
MCPH1-206ENST00000522020 SPRED2Q7Z698 418 aa3.39□□□□□ -1.87
MCPH1-206ENST00000522020 BCL7CQ8WUZ0 217 aaPredicted RBP3.39□□□□□ -1.87
MCPH1-206ENST00000522020 NPHS2Q9NP85 383 aa3.39□□□□□ -1.87
MCPH1-206ENST00000522020 BIN2Q9UBW5 565 aaPredicted RBP3.39□□□□□ -1.87
MCPH1-206ENST00000522020 DCTN4Q9UJW0 460 aa3.39□□□□□ -1.87
MCPH1-206ENST00000522020 TRAK1Q9UPV9 953 aa3.39□□□□□ -1.87
MCPH1-206ENST00000522020 TMEM238LA0A1B0GVL6 79 aa3.38□□□□□ -1.87
MCPH1-206ENST00000522020 LRRC10BA6NIK2 292 aa3.38□□□□□ -1.87
MCPH1-206ENST00000522020 GPR182O15218 404 aa3.38□□□□□ -1.87
MCPH1-206ENST00000522020 EIF5BO60841 1220 aaKnown RBP3.38□□□□□ -1.87
MCPH1-206ENST00000522020 B3GALT4O96024 378 aa3.38□□□□□ -1.87
MCPH1-206ENST00000522020 RXRBP28702 533 aa3.38□□□□□ -1.87
MCPH1-206ENST00000522020 PRPF40BQ6NWY9 871 aaKnown RBP3.38□□□□□ -1.87
MCPH1-206ENST00000522020 CORO1BQ9BR76 489 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms