RNA–Protein interactions for RNA: ENST00000521922.5

UBR5-212, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBR5, Length 9,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-212ENST00000521922 SPDYE2Q495Y8 402 aa16.33■□□□□ 0.2
UBR5-212ENST00000521922 EEF1DP29692 281 aaKnown RBP16.33■□□□□ 0.2
UBR5-212ENST00000521922 RSBN1LQ6PCB5 846 aaPredicted RBP16.33■□□□□ 0.2
UBR5-212ENST00000521922 GTPBP10A4D1E9 387 aaKnown RBP16.33■□□□□ 0.2
UBR5-212ENST00000521922 NPR1P16066 1061 aa16.33■□□□□ 0.2
UBR5-212ENST00000521922 CABP2Q9NPB3 220 aa16.33■□□□□ 0.2
UBR5-212ENST00000521922 TROVE2P10155 538 aaKnown RBP eCLIP16.33■□□□□ 0.2
UBR5-212ENST00000521922 PALM2Q8IXS6 379 aa16.33■□□□□ 0.2
UBR5-212ENST00000521922 TRIM56Q9BRZ2 755 aaKnown RBP16.33■□□□□ 0.2
UBR5-212ENST00000521922 ZNF530Q6P9A1 599 aaPredicted RBP16.33■□□□□ 0.2
UBR5-212ENST00000521922 ZKSCAN3Q9BRR0 538 aa16.33■□□□□ 0.2
UBR5-212ENST00000521922 TSR2Q969E8 191 aaKnown RBP16.32■□□□□ 0.2
UBR5-212ENST00000521922 PPP2R3AQ06190 1150 aa16.32■□□□□ 0.2
UBR5-212ENST00000521922 NUTM2BA6NNL0 878 aaPredicted RBP16.32■□□□□ 0.2
UBR5-212ENST00000521922 NUTM2EB1AL46 878 aaPredicted RBP16.32■□□□□ 0.2
UBR5-212ENST00000521922 SULT6B1Q6IMI4 303 aa16.32■□□□□ 0.2
UBR5-212ENST00000521922 C8orf74Q6P047 294 aa16.32■□□□□ 0.2
UBR5-212ENST00000521922 NUTM2AQ8IVF1 878 aaPredicted RBP16.32■□□□□ 0.2
UBR5-212ENST00000521922 ZFYVE1Q9HBF4 777 aa16.32■□□□□ 0.2
UBR5-212ENST00000521922 SMARCA4P51532 1647 aa16.32■□□□□ 0.2
UBR5-212ENST00000521922 E9PMD0 336 aa16.32■□□□□ 0.2
UBR5-212ENST00000521922 VGLL3A8MV65 326 aa16.32■□□□□ 0.2
UBR5-212ENST00000521922 TSPY3P0CV98 308 aa16.32■□□□□ 0.2
UBR5-212ENST00000521922 TSPY8P0CW00 308 aa16.32■□□□□ 0.2
UBR5-212ENST00000521922 RAPGEF1Q13905 1077 aa16.32■□□□□ 0.2
UBR5-212ENST00000521922 MX1P20591 662 aa16.32■□□□□ 0.2
UBR5-212ENST00000521922 MYCBPQ99417 103 aaPredicted RBP16.32■□□□□ 0.2
UBR5-212ENST00000521922 IGSF3O75054 1194 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 ZSCAN23Q3MJ62 389 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.31■□□□□ 0.2
UBR5-212ENST00000521922 HEATR3Q7Z4Q2 680 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 NOP14P78316 857 aaKnown RBP16.31■□□□□ 0.2
UBR5-212ENST00000521922 FNBP1Q96RU3 617 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 ORC3Q9UBD5 711 aaPredicted RBP16.31■□□□□ 0.2
UBR5-212ENST00000521922 MYH11P35749 1972 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 PCYT1AP49585 367 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 NBPF6Q5VWK0 638 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 NBPF4Q96M43 638 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 PPWD1Q96BP3 646 aaKnown RBP16.31■□□□□ 0.2
UBR5-212ENST00000521922 LMNB2Q03252 620 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 MGARPQ8TDB4 240 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 TNPO1Q92973 898 aaKnown RBP16.31■□□□□ 0.2
UBR5-212ENST00000521922 MYOM3Q5VTT5 1437 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 GNGT2O14610 69 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 FAM186BQ8IYM0 893 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 ASIC3Q9UHC3 531 aa16.31■□□□□ 0.2
UBR5-212ENST00000521922 EEF1B2P24534 225 aaKnown RBP16.3■□□□□ 0.2
UBR5-212ENST00000521922 RIOK1Q9BRS2 568 aaKnown RBP16.3■□□□□ 0.2
UBR5-212ENST00000521922 GOLGA8QA0A0J9YX86 632 aa16.3■□□□□ 0.2
UBR5-212ENST00000521922 GOLGA8OA6NCC3 632 aa16.3■□□□□ 0.2
UBR5-212ENST00000521922 GOLGA8NF8WBI6 632 aa16.3■□□□□ 0.2
UBR5-212ENST00000521922 POLD1P28340 1107 aa16.3■□□□□ 0.2
UBR5-212ENST00000521922 AOPEPQ8N6M6 819 aa16.3■□□□□ 0.2
UBR5-212ENST00000521922 RIPOR2Q9Y4F9 1068 aa16.3■□□□□ 0.2
UBR5-212ENST00000521922 SKA2Q8WVK7 121 aaPredicted RBP16.3■□□□□ 0.2
UBR5-212ENST00000521922 MRFAP1L1Q96HT8 127 aa16.3■□□□□ 0.2
UBR5-212ENST00000521922 TCHHQ07283 1943 aa16.3■□□□□ 0.2
UBR5-212ENST00000521922 EPB41P11171 864 aaKnown RBP16.3■□□□□ 0.2
UBR5-212ENST00000521922 SMAP1Q8IYB5 467 aaPredicted RBP16.3■□□□□ 0.2
UBR5-212ENST00000521922 RBM27Q9P2N5 1060 aaKnown RBP16.3■□□□□ 0.2
UBR5-212ENST00000521922 COPG1Q9Y678 874 aaKnown RBP16.3■□□□□ 0.2
UBR5-212ENST00000521922 CCDC159P0C7I6 412 aa16.3■□□□□ 0.2
UBR5-212ENST00000521922 CLCN1P35523 988 aa16.3■□□□□ 0.2
UBR5-212ENST00000521922 LIN9Q5TKA1 542 aa16.3■□□□□ 0.2
UBR5-212ENST00000521922 POTEB3A0JP26 581 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 SLC8A1P32418 973 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 CASP2P42575 452 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 POTEBQ6S5H4 581 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 NOP9Q86U38 636 aaKnown RBP16.29■□□□□ 0.2
UBR5-212ENST00000521922 WBP4O75554 376 aaKnown RBP16.29■□□□□ 0.2
UBR5-212ENST00000521922 GRM1Q13255 1194 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 SCOCQ9UIL1 159 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 ITSN2Q9NZM3 1697 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 OCM2P0CE71 109 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 OCMP0CE72 109 aaPredicted RBP16.29■□□□□ 0.2
UBR5-212ENST00000521922 LMOD1P29536 600 aaPredicted RBP16.29■□□□□ 0.2
UBR5-212ENST00000521922 SF3A3Q12874 501 aaKnown RBP eCLIP16.29■□□□□ 0.21e-6■■■■□ 21.5
UBR5-212ENST00000521922 LARP6Q9BRS8 491 aaKnown RBP16.29■□□□□ 0.2
UBR5-212ENST00000521922 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.29■□□□□ 0.2
UBR5-212ENST00000521922 RPL13P26373 211 aaKnown RBP16.29■□□□□ 0.2
UBR5-212ENST00000521922 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
UBR5-212ENST00000521922 ZBBXA8MT70 800 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 RNF40O75150 1001 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 ATP6V1AP38606 617 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 NONOQ15233 471 aaKnown RBP eCLIP16.29■□□□□ 0.22e-6■■■□□ 15
UBR5-212ENST00000521922 DUSP27Q5VZP5 1158 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 POMGNT1Q8WZA1 660 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 NR1H4Q96RI1 486 aaPredicted RBP16.29■□□□□ 0.2
UBR5-212ENST00000521922 SATB2Q9UPW6 733 aa16.29■□□□□ 0.2
UBR5-212ENST00000521922 WAPLQ7Z5K2 1190 aa16.28■□□□□ 0.2
UBR5-212ENST00000521922 C6orf229H3BNL8 230 aa16.28■□□□□ 0.2
UBR5-212ENST00000521922 NKTRP30414 1462 aaKnown RBP16.28■□□□□ 0.2
UBR5-212ENST00000521922 RNASE9P60153 205 aaKnown RBP16.28■□□□□ 0.2
UBR5-212ENST00000521922 NCOA7Q8NI08 942 aa16.28■□□□□ 0.2
UBR5-212ENST00000521922 BAZ2BQ9UIF8 2168 aaKnown RBP16.28■□□□□ 0.2
UBR5-212ENST00000521922 FBXO2Q9UK22 296 aaPredicted RBP16.28■□□□□ 0.2
UBR5-212ENST00000521922 OLA1Q9NTK5 396 aaKnown RBP16.28■□□□□ 0.2
UBR5-212ENST00000521922 SSFA2P28290 1259 aa16.28■□□□□ 0.2
UBR5-212ENST00000521922 WTAPQ15007 396 aa16.28■□□□□ 0.2
UBR5-212ENST00000521922 KRT10P13645 584 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms