RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 CCDC86Q9H6F5 360 aaKnown RBP4.88□□□□□ -1.63
SNORA40.14-201ENST00000516543 PAK6Q9NQU5 681 aaPredicted RBP4.88□□□□□ -1.63
SNORA40.14-201ENST00000516543 BSDC1Q9NW68 430 aaPredicted RBP4.88□□□□□ -1.63
SNORA40.14-201ENST00000516543 U3KQE9 123 aa4.88□□□□□ -1.63
SNORA40.14-201ENST00000516543 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.87□□□□□ -1.63
SNORA40.14-201ENST00000516543 EIF1AYO14602 144 aaKnown RBP4.87□□□□□ -1.63
SNORA40.14-201ENST00000516543 TMPRSS2O15393 492 aa4.87□□□□□ -1.63
SNORA40.14-201ENST00000516543 NDUFB5O43674 189 aa4.87□□□□□ -1.63
SNORA40.14-201ENST00000516543 GRM2Q14416 872 aa4.87□□□□□ -1.63
SNORA40.14-201ENST00000516543 PI16Q6UXB8 463 aa4.87□□□□□ -1.63
SNORA40.14-201ENST00000516543 TXNDC2Q86VQ3 553 aa4.87□□□□□ -1.63
SNORA40.14-201ENST00000516543 FLCNQ8NFG4 579 aa4.87□□□□□ -1.63
SNORA40.14-201ENST00000516543 EPS8L3Q8TE67 593 aaKnown RBP4.87□□□□□ -1.63
SNORA40.14-201ENST00000516543 USTQ9Y2C2 406 aa4.87□□□□□ -1.63
SNORA40.14-201ENST00000516543 TMEM238LA0A1B0GVL6 79 aa4.86□□□□□ -1.63
SNORA40.14-201ENST00000516543 ZNF862O60290 1169 aa4.86□□□□□ -1.63
SNORA40.14-201ENST00000516543 GADD45BO75293 160 aaPredicted RBP4.86□□□□□ -1.63
SNORA40.14-201ENST00000516543 CDK5R2Q13319 367 aa4.86□□□□□ -1.63
SNORA40.14-201ENST00000516543 DUSP27Q5VZP5 1158 aa4.86□□□□□ -1.63
SNORA40.14-201ENST00000516543 SPRED2Q7Z698 418 aa4.86□□□□□ -1.63
SNORA40.14-201ENST00000516543 FBXL18Q96ME1 805 aa4.86□□□□□ -1.63
SNORA40.14-201ENST00000516543 BNIP3Q12983 259 aa4.85□□□□□ -1.63
SNORA40.14-201ENST00000516543 PDE3BQ13370 1112 aa4.85□□□□□ -1.63
SNORA40.14-201ENST00000516543 OGFOD2Q6N063 350 aa4.85□□□□□ -1.63
SNORA40.14-201ENST00000516543 PRPF40BQ6NWY9 871 aaKnown RBP4.85□□□□□ -1.63
SNORA40.14-201ENST00000516543 OGFOD3Q6PK18 319 aa4.85□□□□□ -1.63
SNORA40.14-201ENST00000516543 FAM181AQ8N9Y4 354 aa4.85□□□□□ -1.63
SNORA40.14-201ENST00000516543 TMC1Q8TDI8 760 aa4.85□□□□□ -1.63
SNORA40.14-201ENST00000516543 STK35Q8TDR2 534 aa4.85□□□□□ -1.63
SNORA40.14-201ENST00000516543 BCL7CQ8WUZ0 217 aaPredicted RBP4.85□□□□□ -1.63
SNORA40.14-201ENST00000516543 FANCD2OSQ96PS1 177 aa4.85□□□□□ -1.63
SNORA40.14-201ENST00000516543 CRIM1Q9NZV1 1036 aa4.85□□□□□ -1.63
SNORA40.14-201ENST00000516543 PCDHGC5Q9Y5F6 944 aa4.85□□□□□ -1.63
SNORA40.14-201ENST00000516543 EIF4EBP3O60516 100 aaPredicted RBP4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 LEFTY1O75610 366 aa4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 NEFLP07196 543 aa4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 FAM87AP0C7U9 286 aa4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 YBX3P16989 372 aaKnown RBP eCLIP4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 ITGB5P18084 799 aa4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 CD96P40200 585 aa4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 FCGRTP55899 365 aa4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 PTPN12Q05209 780 aaKnown RBP4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 AP3B2Q13367 1082 aa4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 HP1BP3Q5SSJ5 553 aaPredicted RBP4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 C14orf37Q86TY3 774 aa4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 PLD6Q8N2A8 252 aaKnown RBP4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 CSRNP1Q96S65 589 aa4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 ARID3AQ99856 593 aa4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 DISC1Q9NRI5 854 aa4.84□□□□□ -1.63
SNORA40.14-201ENST00000516543 GSTP1P09211 210 aaKnown RBP4.83□□□□□ -1.64
SNORA40.14-201ENST00000516543 HCLS1P14317 486 aaPredicted RBP4.83□□□□□ -1.64
SNORA40.14-201ENST00000516543 CYP27A1Q02318 531 aa4.83□□□□□ -1.64
SNORA40.14-201ENST00000516543 TTLL4Q14679 1199 aa4.83□□□□□ -1.64
SNORA40.14-201ENST00000516543 B4GALNT3Q6L9W6 998 aa4.83□□□□□ -1.64
SNORA40.14-201ENST00000516543 MPRIPQ6WCQ1 1025 aa4.83□□□□□ -1.64
SNORA40.14-201ENST00000516543 PDZD3Q86UT5 571 aa4.83□□□□□ -1.64
SNORA40.14-201ENST00000516543 RETREG2Q8NC44 543 aa4.83□□□□□ -1.64
SNORA40.14-201ENST00000516543 DDX54Q8TDD1 881 aaKnown RBP4.83□□□□□ -1.64
SNORA40.14-201ENST00000516543 DNAJC25Q9H1X3 360 aa4.83□□□□□ -1.64
SNORA40.14-201ENST00000516543 ZFYVE1Q9HBF4 777 aa4.83□□□□□ -1.64
SNORA40.14-201ENST00000516543 SYNGAP1Q96PV0 1343 aa4.82□□□□□ -1.64
SNORA40.14-201ENST00000516543 PAPLNO95428 1278 aa4.82□□□□□ -1.64
SNORA40.14-201ENST00000516543 NEFMP07197 916 aa4.82□□□□□ -1.64
SNORA40.14-201ENST00000516543 ID3Q02535 119 aa4.82□□□□□ -1.64
SNORA40.14-201ENST00000516543 KIF4BQ2VIQ3 1234 aa4.82□□□□□ -1.64
SNORA40.14-201ENST00000516543 RPS26P11Q5JNZ5 115 aaPredicted RBP4.82□□□□□ -1.64
SNORA40.14-201ENST00000516543 DTHD1Q6ZMT9 781 aa4.82□□□□□ -1.64
SNORA40.14-201ENST00000516543 KCNB2Q92953 911 aa4.82□□□□□ -1.64
SNORA40.14-201ENST00000516543 CITED4Q96RK1 184 aa4.82□□□□□ -1.64
SNORA40.14-201ENST00000516543 GPN3Q9UHW5 284 aaPredicted RBP4.82□□□□□ -1.64
SNORA40.14-201ENST00000516543 SLC5A6Q9Y289 635 aa4.82□□□□□ -1.64
SNORA40.14-201ENST00000516543 RNGTTO60942 597 aaKnown RBP4.81□□□□□ -1.64
SNORA40.14-201ENST00000516543 CD8BP10966 210 aa4.81□□□□□ -1.64
SNORA40.14-201ENST00000516543 PLCL1Q15111 1095 aa4.81□□□□□ -1.64
SNORA40.14-201ENST00000516543 ZNF792Q3KQV3 632 aa4.81□□□□□ -1.64
SNORA40.14-201ENST00000516543 TMC7Q7Z402 723 aa4.81□□□□□ -1.64
SNORA40.14-201ENST00000516543 SMYD4Q8IYR2 804 aaPredicted RBP4.81□□□□□ -1.64
SNORA40.14-201ENST00000516543 AGBL5Q8NDL9 886 aa4.81□□□□□ -1.64
SNORA40.14-201ENST00000516543 RBCK1Q9BYM8 510 aa4.81□□□□□ -1.64
SNORA40.14-201ENST00000516543 PIDD1Q9HB75 910 aa4.81□□□□□ -1.64
SNORA40.14-201ENST00000516543 TRAK1Q9UPV9 953 aa4.81□□□□□ -1.64
SNORA40.14-201ENST00000516543 RBAK-RBAKDNI3L0D1 243 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 C8AP07357 584 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 SLFN14P0C7P3 912 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 FZD5Q13467 585 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 CYP27C1Q4G0S4 372 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 NXPE4Q6UWF7 544 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 SULF2Q8IWU5 870 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 ALKBH8Q96BT7 664 aaKnown RBP4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 ASIC4Q96FT7 647 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 BCO2Q9BYV7 579 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 ATXN3LQ9H3M9 355 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 TMEM39AQ9NV64 488 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 ADAMTS6Q9UKP5 1117 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 AKAP2Q9Y2D5 859 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 CARMIL2Q6F5E8 1435 aa4.8□□□□□ -1.64
SNORA40.14-201ENST00000516543 SOWAHDA6NJG2 315 aa4.79□□□□□ -1.64
SNORA40.14-201ENST00000516543 MAP1SQ66K74 1059 aaPredicted RBP4.79□□□□□ -1.64
SNORA40.14-201ENST00000516543 UBE3DQ7Z6J8 389 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms