RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 ALG1Q9BT22 464 aa20.32■□□□□ 0.84
SNX2-213ENST00000514949 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
SNX2-213ENST00000514949 IMPACTQ9P2X3 320 aa20.32■□□□□ 0.84
SNX2-213ENST00000514949 ZNF335Q9H4Z2 1342 aaPredicted RBP20.31■□□□□ 0.84
SNX2-213ENST00000514949 STK36Q9NRP7 1315 aa20.31■□□□□ 0.84
SNX2-213ENST00000514949 SMTNL1A8MU46 457 aa20.31■□□□□ 0.84
SNX2-213ENST00000514949 SLC3A2P08195 630 aaKnown RBP20.31■□□□□ 0.84
SNX2-213ENST00000514949 U2AF2P26368 475 aaKnown RBP eCLIP20.31■□□□□ 0.84
SNX2-213ENST00000514949 SYCP1Q15431 976 aa20.31■□□□□ 0.84
SNX2-213ENST00000514949 DZIP3Q86Y13 1208 aaKnown RBP20.31■□□□□ 0.84
SNX2-213ENST00000514949 LY9Q9HBG7 655 aa20.31■□□□□ 0.84
SNX2-213ENST00000514949 HPSEQ9Y251 543 aa20.31■□□□□ 0.84
SNX2-213ENST00000514949 TIAM2Q8IVF5 1701 aa20.31■□□□□ 0.84
SNX2-213ENST00000514949 GSDMDP57764 484 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 NLRP12P59046 1061 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 VPS37DQ86XT2 251 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 SPATA5Q8NB90 893 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 ANKRD7Q92527 254 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 AIDAQ96BJ3 306 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.3■□□□□ 0.84
SNX2-213ENST00000514949 APPP05067 770 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 PFKFB1P16118 471 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 CDC27P30260 824 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 PTPAQ15257 358 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 DPCR1Q3MIW9 517 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 KRT40Q6A162 431 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 RAB11FIP4Q86YS3 637 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 JMYQ8N9B5 988 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 CCDC94Q9BW85 323 aaPredicted RBP20.3■□□□□ 0.84
SNX2-213ENST00000514949 FAM217BQ9NTX9 383 aaPredicted RBP20.3■□□□□ 0.84
SNX2-213ENST00000514949 SLIT2O94813 1529 aa20.3■□□□□ 0.84
SNX2-213ENST00000514949 B4E1Z4 1266 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 ZBTB43O43298 467 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 WDHD1O75717 1129 aaPredicted RBP20.29■□□□□ 0.84
SNX2-213ENST00000514949 DHX8Q14562 1220 aaKnown RBP20.29■□□□□ 0.84
SNX2-213ENST00000514949 TSC1Q92574 1164 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 MAP3K14Q99558 947 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 MTA3Q9BTC8 594 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 A0A087WWV3 80 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 TNNT1P13805 278 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 SLC5A1P13866 664 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 EIF5P55010 431 aaKnown RBP20.29■□□□□ 0.84
SNX2-213ENST00000514949 CCZ1BP86790 482 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 CCZ1P86791 482 aaPredicted RBP20.29■□□□□ 0.84
SNX2-213ENST00000514949 MAP3K12Q12852 859 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 NBPF11Q86T75 865 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 IFNL3Q8IZI9 196 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 ERCC4Q92889 916 aaPredicted RBP20.29■□□□□ 0.84
SNX2-213ENST00000514949 CNNM2Q9H8M5 875 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 TUBE1Q9UJT0 475 aa20.29■□□□□ 0.84
SNX2-213ENST00000514949 IKBKBO14920 756 aa20.28■□□□□ 0.84
SNX2-213ENST00000514949 ZRSR1Q15695 479 aaKnown RBP20.28■□□□□ 0.84
SNX2-213ENST00000514949 C16orf45Q96MC5 204 aaPredicted RBP20.28■□□□□ 0.84
SNX2-213ENST00000514949 EPB41L4AQ9HCS5 686 aaPredicted RBP20.28■□□□□ 0.84
SNX2-213ENST00000514949 RTL9Q8NET4 1388 aa20.28■□□□□ 0.84
SNX2-213ENST00000514949 ECM29Q5VYK3 1845 aa20.28■□□□□ 0.84
SNX2-213ENST00000514949 CHD4Q14839 1912 aa20.28■□□□□ 0.84
SNX2-213ENST00000514949 CCDC69A6NI79 296 aa20.27■□□□□ 0.84
SNX2-213ENST00000514949 SKILP12757 684 aa20.27■□□□□ 0.84
SNX2-213ENST00000514949 NYAP1Q6ZVC0 841 aa20.27■□□□□ 0.84
SNX2-213ENST00000514949 AIFM3Q96NN9 605 aa20.27■□□□□ 0.84
SNX2-213ENST00000514949 SENP2Q9HC62 589 aa20.27■□□□□ 0.84
SNX2-213ENST00000514949 PNPLA7Q6ZV29 1317 aa20.27■□□□□ 0.84
SNX2-213ENST00000514949 EXOC5O00471 708 aa20.27■□□□□ 0.84
SNX2-213ENST00000514949 IARSP41252 1262 aaKnown RBP20.27■□□□□ 0.84
SNX2-213ENST00000514949 RASGRF1Q13972 1273 aa20.27■□□□□ 0.84
SNX2-213ENST00000514949 NCAPHQ15003 741 aa20.27■□□□□ 0.84
SNX2-213ENST00000514949 ELOA2Q8IYF1 753 aaPredicted RBP20.27■□□□□ 0.84
SNX2-213ENST00000514949 MROH7-TTC4A0A0A0MT08 1334 aa20.27■□□□□ 0.83
SNX2-213ENST00000514949 RANBP6O60518 1105 aaKnown RBP20.26■□□□□ 0.83
SNX2-213ENST00000514949 GNAT2P19087 354 aa20.26■□□□□ 0.83
SNX2-213ENST00000514949 ARID5BQ14865 1188 aa20.26■□□□□ 0.83
SNX2-213ENST00000514949 TPD52L1Q16890 204 aaPredicted RBP20.26■□□□□ 0.83
SNX2-213ENST00000514949 TMEM67Q5HYA8 995 aa20.26■□□□□ 0.83
SNX2-213ENST00000514949 KRT23Q9C075 422 aa20.26■□□□□ 0.83
SNX2-213ENST00000514949 ZSWIM5Q9P217 1185 aa20.26■□□□□ 0.83
SNX2-213ENST00000514949 GSG1L2A8MUP6 293 aa20.26■□□□□ 0.83
SNX2-213ENST00000514949 IFNAR1P17181 557 aa20.26■□□□□ 0.83
SNX2-213ENST00000514949 RCAN1P53805 252 aa20.26■□□□□ 0.83
SNX2-213ENST00000514949 AKNAD1Q5T1N1 836 aa20.26■□□□□ 0.83
SNX2-213ENST00000514949 RESP18Q5W5W9 173 aa20.26■□□□□ 0.83
SNX2-213ENST00000514949 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.26■□□□□ 0.83
SNX2-213ENST00000514949 NAPBQ9H115 298 aa20.26■□□□□ 0.83
SNX2-213ENST00000514949 WNK3Q9BYP7 1800 aa20.25■□□□□ 0.83
SNX2-213ENST00000514949 GOLGA8AA7E2F4 631 aa20.25■□□□□ 0.83
SNX2-213ENST00000514949 FMNL1O95466 1100 aaPredicted RBP20.25■□□□□ 0.83
SNX2-213ENST00000514949 SYKP43405 635 aa20.25■□□□□ 0.83
SNX2-213ENST00000514949 KCNJ6P48051 423 aa20.25■□□□□ 0.83
SNX2-213ENST00000514949 SHC4Q6S5L8 630 aa20.25■□□□□ 0.83
SNX2-213ENST00000514949 MICU3Q86XE3 530 aa20.25■□□□□ 0.83
SNX2-213ENST00000514949 MAGEB6Q8N7X4 407 aa20.25■□□□□ 0.83
SNX2-213ENST00000514949 PHKBQ93100 1093 aa20.25■□□□□ 0.83
SNX2-213ENST00000514949 MBD4O95243 580 aa20.24■□□□□ 0.83
SNX2-213ENST00000514949 TPM4P67936 248 aa20.24■□□□□ 0.83
SNX2-213ENST00000514949 SUSD4Q5VX71 490 aa20.24■□□□□ 0.83
SNX2-213ENST00000514949 FILIP1Q7Z7B0 1213 aa20.24■□□□□ 0.83
SNX2-213ENST00000514949 STAG1Q8WVM7 1258 aa20.24■□□□□ 0.83
SNX2-213ENST00000514949 WASF1Q92558 559 aa20.24■□□□□ 0.83
SNX2-213ENST00000514949 SLC12A7Q9Y666 1083 aa20.24■□□□□ 0.83
SNX2-213ENST00000514949 RREB1Q92766 1687 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms