RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 FAM205AQ6ZU69 1335 aa15.2■□□□□ 0.02
PVT1-203ENST00000513868 WDR19Q8NEZ3 1342 aa15.2■□□□□ 0.02
PVT1-203ENST00000513868 RIMBP2O15034 1052 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 CTDSPL2Q05D32 466 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 APOBRQ0VD83 1088 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 DPP8Q6V1X1 898 aaPredicted RBP15.19■□□□□ 0.02
PVT1-203ENST00000513868 SLC16A10Q8TF71 515 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 C7orf43Q8WVR3 580 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 GTF3C6Q969F1 213 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 GPHNQ9NQX3 736 aaPredicted RBP15.19■□□□□ 0.02
PVT1-203ENST00000513868 SMC3Q9UQE7 1217 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 NAV1Q8NEY1 1877 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 NEDD4P46934 1319 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 PRC1O43663 620 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 TDO2P48775 406 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 STK3Q13188 491 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 CYB5R4Q7L1T6 521 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 DZIP1Q86YF9 867 aaKnown RBP15.19■□□□□ 0.02
PVT1-203ENST00000513868 COA1Q9GZY4 146 aa15.19■□□□□ 0.02
PVT1-203ENST00000513868 AATFQ9NY61 560 aaKnown RBP eCLIP15.19■□□□□ 0.02
PVT1-203ENST00000513868 SMIM22K7EJ46 135 aa15.18■□□□□ 0.02
PVT1-203ENST00000513868 PFKFB2O60825 505 aa15.18■□□□□ 0.02
PVT1-203ENST00000513868 BAG4O95429 457 aaKnown RBP15.18■□□□□ 0.02
PVT1-203ENST00000513868 GJB2P29033 226 aa15.18■□□□□ 0.02
PVT1-203ENST00000513868 AKNAD1Q5T1N1 836 aa15.18■□□□□ 0.02
PVT1-203ENST00000513868 GIMAP6Q6P9H5 292 aa15.18■□□□□ 0.02
PVT1-203ENST00000513868 RALYLQ86SE5 291 aaKnown RBP15.18■□□□□ 0.02
PVT1-203ENST00000513868 ANAPC4Q9UJX5 808 aa15.18■□□□□ 0.02
PVT1-203ENST00000513868 B4E1Z4 1266 aa15.17■□□□□ 0.02
PVT1-203ENST00000513868 SYT1P21579 422 aa15.17■□□□□ 0.02
PVT1-203ENST00000513868 FGD1P98174 961 aa15.17■□□□□ 0.02
PVT1-203ENST00000513868 PPARAQ07869 468 aa15.17■□□□□ 0.02
PVT1-203ENST00000513868 SCRN1Q12765 414 aa15.17■□□□□ 0.02
PVT1-203ENST00000513868 TRDNQ13061 729 aa15.17■□□□□ 0.02
PVT1-203ENST00000513868 DIXDC1Q155Q3 683 aa15.17■□□□□ 0.02
PVT1-203ENST00000513868 STAG1Q8WVM7 1258 aa15.17■□□□□ 0.02
PVT1-203ENST00000513868 CNKSR1Q969H4 720 aa15.17■□□□□ 0.02
PVT1-203ENST00000513868 ZNF274Q96GC6 653 aaPredicted RBP15.17■□□□□ 0.02
PVT1-203ENST00000513868 GBP4Q96PP9 640 aa15.17■□□□□ 0.02
PVT1-203ENST00000513868 ZC3H12CQ9C0D7 883 aaKnown RBP15.17■□□□□ 0.02
PVT1-203ENST00000513868 MYH1P12882 1939 aa15.17■□□□□ 0.02
PVT1-203ENST00000513868 DDX60LQ5H9U9 1706 aaKnown RBP15.17■□□□□ 0.02
PVT1-203ENST00000513868 ADAMTSL1Q8N6G6 1762 aa15.17■□□□□ 0.02
PVT1-203ENST00000513868 PSME4Q14997 1843 aa15.17■□□□□ 0.02
PVT1-203ENST00000513868 BRCA1P38398 1863 aaKnown RBP15.17■□□□□ 0.02
PVT1-203ENST00000513868 PDIA3P30101 505 aaKnown RBP15.16■□□□□ 0.02
PVT1-203ENST00000513868 PPP4CP60510 307 aa15.16■□□□□ 0.02
PVT1-203ENST00000513868 MFSD14BQ5SR56 506 aa15.16■□□□□ 0.02
PVT1-203ENST00000513868 RTFDC1Q9BY42 306 aaPredicted RBP15.16■□□□□ 0.02
PVT1-203ENST00000513868 ZSWIM5Q9P217 1185 aa15.16■□□□□ 0.02
PVT1-203ENST00000513868 BRPF3Q9ULD4 1205 aa15.16■□□□□ 0.02
PVT1-203ENST00000513868 ECM29Q5VYK3 1845 aa15.16■□□□□ 0.02
PVT1-203ENST00000513868 GSTO1P78417 241 aa15.16■□□□□ 0.02
PVT1-203ENST00000513868 CTR9Q6PD62 1173 aa15.16■□□□□ 0.02
PVT1-203ENST00000513868 TBC1D22AQ8WUA7 517 aa15.16■□□□□ 0.02
PVT1-203ENST00000513868 CRNKL1Q9BZJ0 848 aaKnown RBP15.16■□□□□ 0.02
PVT1-203ENST00000513868 TMX4Q9H1E5 349 aaPredicted RBP15.16■□□□□ 0.02
PVT1-203ENST00000513868 DCP1AQ9NPI6 582 aaPredicted RBP15.16■□□□□ 0.02
PVT1-203ENST00000513868 MKRN1Q9UHC7 482 aaKnown RBP15.16■□□□□ 0.02
PVT1-203ENST00000513868 CYP2D7A0A087X1C5 515 aa15.15■□□□□ 0.02
PVT1-203ENST00000513868 GTF2IP78347 998 aa15.15■□□□□ 0.02
PVT1-203ENST00000513868 DOK7Q18PE1 504 aa15.15■□□□□ 0.02
PVT1-203ENST00000513868 FOXD4L5Q5VV16 416 aaPredicted RBP15.15■□□□□ 0.02
PVT1-203ENST00000513868 MFSD6Q6ZSS7 791 aa15.15■□□□□ 0.02
PVT1-203ENST00000513868 IGDCC4Q8TDY8 1250 aa15.15■□□□□ 0.02
PVT1-203ENST00000513868 FOXD4L4Q8WXT5 416 aaPredicted RBP15.15■□□□□ 0.02
PVT1-203ENST00000513868 CNNM2Q9H8M5 875 aa15.15■□□□□ 0.02
PVT1-203ENST00000513868 ATP8A2Q9NTI2 1148 aa15.15■□□□□ 0.02
PVT1-203ENST00000513868 MROH7-TTC4A0A0A0MT08 1334 aa15.15■□□□□ 0.02
PVT1-203ENST00000513868 WDR33Q9C0J8 1336 aaKnown RBP15.15■□□□□ 0.02
PVT1-203ENST00000513868 DDX11L8A8MPP1 907 aa15.14■□□□□ 0.01
PVT1-203ENST00000513868 MINDY4BA8MYZ0 360 aa15.14■□□□□ 0.01
PVT1-203ENST00000513868 SH2B2O14492 632 aaPredicted RBP15.14■□□□□ 0.01
PVT1-203ENST00000513868 STX6O43752 255 aa15.14■□□□□ 0.01
PVT1-203ENST00000513868 CTDNEP1O95476 244 aa15.14■□□□□ 0.01
PVT1-203ENST00000513868 LDHCP07864 332 aa15.14■□□□□ 0.01
PVT1-203ENST00000513868 FGRP09769 529 aa15.14■□□□□ 0.01
PVT1-203ENST00000513868 KCNA3P22001 575 aa15.14■□□□□ 0.01
PVT1-203ENST00000513868 CERS5Q8N5B7 392 aa15.14■□□□□ 0.01
PVT1-203ENST00000513868 SMARCC2Q8TAQ2 1214 aa15.14■□□□□ 0.01
PVT1-203ENST00000513868 FAM163AQ96GL9 167 aaPredicted RBP15.14■□□□□ 0.01
PVT1-203ENST00000513868 EYA3Q99504 573 aa15.14■□□□□ 0.01
PVT1-203ENST00000513868 KRT23Q9C075 422 aa15.14■□□□□ 0.01
PVT1-203ENST00000513868 HPS5Q9UPZ3 1129 aa15.14■□□□□ 0.01
PVT1-203ENST00000513868 MYH15Q9Y2K3 1946 aa15.14■□□□□ 0.01
PVT1-203ENST00000513868 GAKO14976 1311 aa15.13■□□□□ 0.01
PVT1-203ENST00000513868 GPR75-ASB3A0A0A6YYF3 556 aa15.13■□□□□ 0.01
PVT1-203ENST00000513868 USP17L12C9JPN9 530 aa15.13■□□□□ 0.01
PVT1-203ENST00000513868 USP17L21D6R901 530 aa15.13■□□□□ 0.01
PVT1-203ENST00000513868 JAK2O60674 1132 aa15.13■□□□□ 0.01
PVT1-203ENST00000513868 KDM4AO75164 1064 aa15.13■□□□□ 0.01
PVT1-203ENST00000513868 EVX2Q03828 476 aa15.13■□□□□ 0.01
PVT1-203ENST00000513868 SH3RF3Q8TEJ3 882 aaPredicted RBP15.13■□□□□ 0.01
PVT1-203ENST00000513868 CHAMP1Q96JM3 812 aa15.13■□□□□ 0.01
PVT1-203ENST00000513868 TMEM87BQ96K49 555 aa15.13■□□□□ 0.01
PVT1-203ENST00000513868 LLPHQ9BRT6 129 aaKnown RBP15.13■□□□□ 0.01
PVT1-203ENST00000513868 SENP2Q9HC62 589 aa15.13■□□□□ 0.01
PVT1-203ENST00000513868 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
PVT1-203ENST00000513868 ANGEL1Q9UNK9 670 aaKnown RBP15.13■□□□□ 0.01
PVT1-203ENST00000513868 MTMR6Q9Y217 621 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms