RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 AIDAQ96BJ3 306 aa17■□□□□ 0.31
DDR1-271ENST00000513240 RCOR1Q9UKL0 485 aa17■□□□□ 0.31
DDR1-271ENST00000513240 ZNF215Q9UL58 517 aaPredicted RBP17■□□□□ 0.31
DDR1-271ENST00000513240 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
DDR1-271ENST00000513240 NEDD4P46934 1319 aa17■□□□□ 0.31
DDR1-271ENST00000513240 USP27XA6NNY8 438 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 MBD4O95243 580 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 CSF1RP07333 972 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 PDE6AP16499 860 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 CYP2C19P33261 490 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 ELF2Q15723 593 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 NEK11Q8NG66 645 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 CYP2D7A0A087X1C5 515 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 LOC102724159A0A0B4J2E5 919 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 GOLGA6L6A8MZA4 724 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 GUCY1A2P33402 732 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 PWP2Q15269 919 aaKnown RBP16.99■□□□□ 0.31
DDR1-271ENST00000513240 GPR108Q9NPR9 543 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 KCNJ14Q9UNX9 436 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 ZNF142P52746 1687 aaPredicted RBP16.99■□□□□ 0.31
DDR1-271ENST00000513240 PDE8BO95263 885 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 ATP6V1AP38606 617 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 GOLGA8FQ08AF8 430 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 GOLGA8DPQ0D2H9 430 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 TRDNQ13061 729 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 DPCR1Q3MIW9 517 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 MPHOSPH8Q99549 860 aa16.99■□□□□ 0.31
DDR1-271ENST00000513240 MINDY4BA8MYZ0 360 aa16.98■□□□□ 0.31
DDR1-271ENST00000513240 PRDM1O75626 825 aa16.98■□□□□ 0.31
DDR1-271ENST00000513240 GYS2P54840 703 aa16.98■□□□□ 0.31
DDR1-271ENST00000513240 RASGRF1Q13972 1273 aa16.98■□□□□ 0.31
DDR1-271ENST00000513240 NUP133Q8WUM0 1156 aa16.98■□□□□ 0.31
DDR1-271ENST00000513240 WDHD1O75717 1129 aaPredicted RBP16.98■□□□□ 0.31
DDR1-271ENST00000513240 ADD2P35612 726 aa16.98■□□□□ 0.31
DDR1-271ENST00000513240 TPD52L1Q16890 204 aaPredicted RBP16.98■□□□□ 0.31
DDR1-271ENST00000513240 SDR42E1Q8WUS8 393 aa16.98■□□□□ 0.31
DDR1-271ENST00000513240 ALG1Q9BT22 464 aa16.98■□□□□ 0.31
DDR1-271ENST00000513240 KCPQ6ZWJ8 1503 aa16.97■□□□□ 0.31
DDR1-271ENST00000513240 SYNE3Q6ZMZ3 975 aa16.97■□□□□ 0.31
DDR1-271ENST00000513240 PTF1AQ7RTS3 328 aa16.97■□□□□ 0.31
DDR1-271ENST00000513240 ZNF274Q96GC6 653 aaPredicted RBP16.97■□□□□ 0.31
DDR1-271ENST00000513240 SLC26A6Q9BXS9 759 aa16.97■□□□□ 0.31
DDR1-271ENST00000513240 METAP2P50579 478 aaKnown RBP eCLIP16.97■□□□□ 0.316e-6■■■■□ 24.8
DDR1-271ENST00000513240 NAA16Q6N069 864 aaPredicted RBP16.97■□□□□ 0.31
DDR1-271ENST00000513240 ZNF396Q96N95 335 aaPredicted RBP16.97■□□□□ 0.31
DDR1-271ENST00000513240 MRC1P22897 1456 aa16.97■□□□□ 0.31
DDR1-271ENST00000513240 IQCB1Q15051 598 aa16.96■□□□□ 0.31
DDR1-271ENST00000513240 ZSCAN25Q6NSZ9 544 aa16.96■□□□□ 0.31
DDR1-271ENST00000513240 TRIM66O15016 1216 aa16.96■□□□□ 0.31
DDR1-271ENST00000513240 TPM3P06753 285 aa16.96■□□□□ 0.31
DDR1-271ENST00000513240 TMEM67Q5HYA8 995 aa16.96■□□□□ 0.31
DDR1-271ENST00000513240 C10orf67Q8IYJ2 551 aa16.96■□□□□ 0.31
DDR1-271ENST00000513240 FBXO18Q8NFZ0 1043 aa16.96■□□□□ 0.31
DDR1-271ENST00000513240 LLPHQ9BRT6 129 aaKnown RBP16.96■□□□□ 0.31
DDR1-271ENST00000513240 EPB41L4AQ9HCS5 686 aaPredicted RBP16.96■□□□□ 0.31
DDR1-271ENST00000513240 ZNF446Q9NWS9 450 aa16.96■□□□□ 0.31
DDR1-271ENST00000513240 ZSWIM5Q9P217 1185 aa16.96■□□□□ 0.31
DDR1-271ENST00000513240 SALL1Q9NSC2 1324 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 GYG1P46976 350 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 C3orf67Q6ZVT6 689 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 LCORLQ8N3X6 602 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 LINC00301Q8NCQ3 95 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 IFIT3O14879 490 aaKnown RBP16.95■□□□□ 0.3
DDR1-271ENST00000513240 SPTLC2O15270 562 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 FOXN1O15353 648 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
DDR1-271ENST00000513240 MYSM1Q5VVJ2 828 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 ENGASEQ8NFI3 743 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 AGXT2Q9BYV1 514 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.95■□□□□ 0.32e-7■■■□□ 17.5
DDR1-271ENST00000513240 RNF216Q9NWF9 866 aaPredicted RBP16.95■□□□□ 0.3
DDR1-271ENST00000513240 MTMR7Q9Y216 660 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 NIP7Q9Y221 180 aaKnown RBP eCLIP16.95■□□□□ 0.3
DDR1-271ENST00000513240 SMC2O95347 1197 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 LMOD1P29536 600 aaPredicted RBP16.95■□□□□ 0.3
DDR1-271ENST00000513240 GRIN1Q05586 938 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 FAM160A1Q05DH4 1040 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 DHX40Q8IX18 779 aaKnown RBP16.95■□□□□ 0.3
DDR1-271ENST00000513240 MRPS27Q92552 414 aaKnown RBP16.95■□□□□ 0.3
DDR1-271ENST00000513240 NAPBQ9H115 298 aa16.95■□□□□ 0.3
DDR1-271ENST00000513240 PDILTQ8N807 584 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 SPATA5Q8NB90 893 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 FAM53CQ9NYF3 392 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 LRP2BPQ9P2M1 347 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 RIC1Q4ADV7 1423 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 RANBP6O60518 1105 aaKnown RBP16.94■□□□□ 0.3
DDR1-271ENST00000513240 PDE8AO60658 829 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 PRR29P0C7W0 189 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 TDO2P48775 406 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 CEP135Q66GS9 1140 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 KRT40Q6A162 431 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 SYT10Q6XYQ8 523 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 VGLL2Q8N8G2 317 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 RASSF4Q9H2L5 321 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 PAXBP1Q9Y5B6 917 aa16.94■□□□□ 0.3
DDR1-271ENST00000513240 POLR3GO15318 223 aaPredicted RBP16.93■□□□□ 0.3
DDR1-271ENST00000513240 ADGRA1Q86SQ6 560 aa16.93■□□□□ 0.3
DDR1-271ENST00000513240 PLA2G4DQ86XP0 818 aa16.93■□□□□ 0.3
DDR1-271ENST00000513240 GRAMD1CQ8IYS0 662 aa16.93■□□□□ 0.3
DDR1-271ENST00000513240 FMR1NBQ8N0W7 255 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms