RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 CCDC102BQ68D86 513 aa27.57■■■□□ 2
SUDS3P1-201ENST00000505831 CDC42EP5Q6NZY7 148 aa27.57■■■□□ 2
SUDS3P1-201ENST00000505831 FAM151AQ8WW52 585 aa27.57■■■□□ 2
SUDS3P1-201ENST00000505831 SRGAP3O43295 1099 aa27.56■■■□□ 2
SUDS3P1-201ENST00000505831 SOX10P56693 466 aa27.56■■■□□ 2
SUDS3P1-201ENST00000505831 HOOK2Q96ED9 719 aa27.56■■■□□ 2
SUDS3P1-201ENST00000505831 CSADQ9Y600 493 aa27.56■■■□□ 2
SUDS3P1-201ENST00000505831 SPDYE5A6NIY4 337 aa27.55■■■□□ 2
SUDS3P1-201ENST00000505831 LDHBP07195 334 aaKnown RBP27.55■■■□□ 2
SUDS3P1-201ENST00000505831 BRI3BPQ8WY22 251 aa27.55■■■□□ 2
SUDS3P1-201ENST00000505831 SNCAIPQ9Y6H5 919 aa27.55■■■□□ 2
SUDS3P1-201ENST00000505831 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.55■■■□□ 2
SUDS3P1-201ENST00000505831 DOCK2Q92608 1830 aa27.54■■■□□ 2
SUDS3P1-201ENST00000505831 PDS5AQ29RF7 1337 aaKnown RBP27.53■■■□□ 2
SUDS3P1-201ENST00000505831 GTF2A2P52657 109 aa27.53■■■□□ 2
SUDS3P1-201ENST00000505831 TFCP2Q12800 502 aa27.53■■■□□ 2
SUDS3P1-201ENST00000505831 ERO1BQ86YB8 467 aa27.53■■■□□ 2
SUDS3P1-201ENST00000505831 ZKSCAN4Q969J2 545 aaPredicted RBP27.53■■■□□ 2
SUDS3P1-201ENST00000505831 OTUD5Q96G74 571 aa27.53■■■□□ 2
SUDS3P1-201ENST00000505831 A0A1B0GUL7 405 aa27.52■■■□□ 2
SUDS3P1-201ENST00000505831 NFIAQ12857 509 aa27.52■■■□□ 2
SUDS3P1-201ENST00000505831 RASGRF1Q13972 1273 aa27.52■■■□□ 2
SUDS3P1-201ENST00000505831 OTOP1Q7RTM1 612 aa27.52■■■□□ 2
SUDS3P1-201ENST00000505831 FRAT1Q92837 279 aaPredicted RBP27.52■■■□□ 2
SUDS3P1-201ENST00000505831 WRNIP1Q96S55 665 aa27.52■■■□□ 2
SUDS3P1-201ENST00000505831 FAM198AQ9UFP1 575 aa27.52■■■□□ 2
SUDS3P1-201ENST00000505831 CCL15-CCL14A0A0B4J2E2 113 aa27.51■■□□□ 1.99
SUDS3P1-201ENST00000505831 GNAI2P04899 355 aa27.51■■□□□ 1.99
SUDS3P1-201ENST00000505831 CCL15Q16663 113 aa27.51■■□□□ 1.99
SUDS3P1-201ENST00000505831 DCAF15Q66K64 600 aa27.51■■□□□ 1.99
SUDS3P1-201ENST00000505831 MIER1Q8N108 512 aa27.51■■□□□ 1.99
SUDS3P1-201ENST00000505831 XAGE2Q96GT9 111 aa27.51■■□□□ 1.99
SUDS3P1-201ENST00000505831 ZNF112Q9UJU3 913 aa27.51■■□□□ 1.99
SUDS3P1-201ENST00000505831 AKAP2Q9Y2D5 859 aa27.51■■□□□ 1.99
SUDS3P1-201ENST00000505831 CAP1Q01518 475 aa27.5■■□□□ 1.99
SUDS3P1-201ENST00000505831 MIGA2Q7L4E1 593 aa27.5■■□□□ 1.99
SUDS3P1-201ENST00000505831 ZGPATQ8N5A5 531 aaKnown RBP27.5■■□□□ 1.99
SUDS3P1-201ENST00000505831 FAM163AQ96GL9 167 aaPredicted RBP27.5■■□□□ 1.99
SUDS3P1-201ENST00000505831 ERO1AQ96HE7 468 aa27.5■■□□□ 1.99
SUDS3P1-201ENST00000505831 ZNF341Q9BYN7 854 aa27.5■■□□□ 1.99
SUDS3P1-201ENST00000505831 USP40Q9NVE5 1235 aa27.5■■□□□ 1.99
SUDS3P1-201ENST00000505831 GAKO14976 1311 aa27.49■■□□□ 1.99
SUDS3P1-201ENST00000505831 PNMA6EA0A0J9YXQ4 647 aa27.49■■□□□ 1.99
SUDS3P1-201ENST00000505831 FAM43AQ8N2R8 423 aa27.49■■□□□ 1.99
SUDS3P1-201ENST00000505831 CLUAP1Q96AJ1 413 aa27.49■■□□□ 1.99
SUDS3P1-201ENST00000505831 TRIM17Q9Y577 477 aa27.49■■□□□ 1.99
SUDS3P1-201ENST00000505831 RBBP6Q7Z6E9 1792 aaKnown RBP27.49■■□□□ 1.99
SUDS3P1-201ENST00000505831 MYO5AQ9Y4I1 1855 aaKnown RBP27.49■■□□□ 1.99
SUDS3P1-201ENST00000505831 IRF6O14896 467 aa27.48■■□□□ 1.99
SUDS3P1-201ENST00000505831 SP3Q02447 781 aa27.48■■□□□ 1.99
SUDS3P1-201ENST00000505831 TCP10Q12799 353 aa27.48■■□□□ 1.99
SUDS3P1-201ENST00000505831 ZFPM1Q8IX07 1006 aa27.48■■□□□ 1.99
SUDS3P1-201ENST00000505831 PTPRFP10586 1907 aa27.47■■□□□ 1.99
SUDS3P1-201ENST00000505831 INPP5BP32019 993 aa27.47■■□□□ 1.99
SUDS3P1-201ENST00000505831 PPIL2Q13356 520 aa27.47■■□□□ 1.99
SUDS3P1-201ENST00000505831 ZKSCAN2Q63HK3 967 aa27.47■■□□□ 1.99
SUDS3P1-201ENST00000505831 CD99L2Q8TCZ2 262 aa27.47■■□□□ 1.99
SUDS3P1-201ENST00000505831 IDI2Q9BXS1 227 aa27.47■■□□□ 1.99
SUDS3P1-201ENST00000505831 CETPP11597 493 aa27.46■■□□□ 1.99
SUDS3P1-201ENST00000505831 MVPQ14764 893 aaKnown RBP27.46■■□□□ 1.99
SUDS3P1-201ENST00000505831 TMEM57Q8N5G2 664 aa27.46■■□□□ 1.99
SUDS3P1-201ENST00000505831 ZCCHC17Q9NP64 241 aaKnown RBP27.46■■□□□ 1.99
SUDS3P1-201ENST00000505831 RFX7Q2KHR2 1363 aa27.46■■□□□ 1.99
SUDS3P1-201ENST00000505831 PHIPQ8WWQ0 1821 aa27.46■■□□□ 1.99
SUDS3P1-201ENST00000505831 PPATQ06203 517 aa27.45■■□□□ 1.98
SUDS3P1-201ENST00000505831 TAF1CQ15572 869 aaPredicted RBP27.45■■□□□ 1.98
SUDS3P1-201ENST00000505831 ZFYVE28Q9HCC9 887 aa27.45■■□□□ 1.98
SUDS3P1-201ENST00000505831 PTPN22Q9Y2R2 807 aa27.45■■□□□ 1.98
SUDS3P1-201ENST00000505831 ZSWIM8A7E2V4 1837 aa27.45■■□□□ 1.98
SUDS3P1-201ENST00000505831 SNAPC2Q13487 334 aa27.44■■□□□ 1.98
SUDS3P1-201ENST00000505831 ZNF384Q8TF68 577 aa27.44■■□□□ 1.98
SUDS3P1-201ENST00000505831 ABCF2Q9UG63 623 aa27.44■■□□□ 1.98
SUDS3P1-201ENST00000505831 ATRNL1Q5VV63 1379 aa27.44■■□□□ 1.98
SUDS3P1-201ENST00000505831 BTBD19C9JJ37 291 aa27.43■■□□□ 1.98
SUDS3P1-201ENST00000505831 ENTPD3O75355 529 aa27.43■■□□□ 1.98
SUDS3P1-201ENST00000505831 HNRNPUQ00839 825 aaKnown RBP eCLIP27.43■■□□□ 1.98
SUDS3P1-201ENST00000505831 MAP3K10Q02779 954 aa27.43■■□□□ 1.98
SUDS3P1-201ENST00000505831 POLA2Q14181 598 aa27.43■■□□□ 1.98
SUDS3P1-201ENST00000505831 NOL9Q5SY16 702 aaKnown RBP27.43■■□□□ 1.98
SUDS3P1-201ENST00000505831 SPTY2D1Q68D10 685 aaPredicted RBP27.43■■□□□ 1.98
SUDS3P1-201ENST00000505831 NEUROD6Q96NK8 337 aa27.43■■□□□ 1.98
SUDS3P1-201ENST00000505831 HMG20BQ9P0W2 317 aa27.43■■□□□ 1.98
SUDS3P1-201ENST00000505831 BRCA2P51587 3418 aa27.42■■□□□ 1.98
SUDS3P1-201ENST00000505831 CDK5RAP2Q96SN8 1893 aa27.42■■□□□ 1.98
SUDS3P1-201ENST00000505831 RGS3P49796 1198 aa27.42■■□□□ 1.98
SUDS3P1-201ENST00000505831 SH3BP5LQ7L8J4 393 aa27.42■■□□□ 1.98
SUDS3P1-201ENST00000505831 SLF2Q8IX21 1173 aa27.42■■□□□ 1.98
SUDS3P1-201ENST00000505831 EFCC1Q9HA90 598 aa27.42■■□□□ 1.98
SUDS3P1-201ENST00000505831 KCNH4Q9UQ05 1017 aa27.42■■□□□ 1.98
SUDS3P1-201ENST00000505831 PHF20L1A8MW92 1017 aa27.41■■□□□ 1.98
SUDS3P1-201ENST00000505831 WDHD1O75717 1129 aaPredicted RBP27.41■■□□□ 1.98
SUDS3P1-201ENST00000505831 ARID4AP29374 1257 aaPredicted RBP27.41■■□□□ 1.98
SUDS3P1-201ENST00000505831 G3BP1Q13283 466 aaKnown RBP eCLIP27.41■■□□□ 1.98
SUDS3P1-201ENST00000505831 DZIP1Q86YF9 867 aaKnown RBP27.41■■□□□ 1.98
SUDS3P1-201ENST00000505831 MKI67P46013 3256 aaKnown RBP27.41■■□□□ 1.98
SUDS3P1-201ENST00000505831 DOCK1Q14185 1865 aa27.4■■□□□ 1.98
SUDS3P1-201ENST00000505831 GPR75-ASB3A0A0A6YYF3 556 aa27.4■■□□□ 1.98
SUDS3P1-201ENST00000505831 TLR2O60603 784 aa27.4■■□□□ 1.98
SUDS3P1-201ENST00000505831 ATP8B2P98198 1209 aa27.4■■□□□ 1.98
SUDS3P1-201ENST00000505831 MECOMQ03112 1051 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms