RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 SH3TC2Q8TF17 1288 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 TRIM47Q96LD4 638 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 GDF15Q99988 308 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 SERPINA10Q9UK55 444 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 FZD1Q9UP38 647 aa7.76□□□□□ -1.17
GYPB-204ENST00000504951 SOX1O00570 391 aaPredicted RBP7.75□□□□□ -1.17
GYPB-204ENST00000504951 DDX58O95786 925 aaKnown RBP7.75□□□□□ -1.17
GYPB-204ENST00000504951 ZNF853P0CG23 659 aa7.75□□□□□ -1.17
GYPB-204ENST00000504951 CCL5P13501 91 aa7.75□□□□□ -1.17
GYPB-204ENST00000504951 IGHMBP2P38935 993 aaKnown RBP7.75□□□□□ -1.17
GYPB-204ENST00000504951 UBXN2AP68543 259 aa7.75□□□□□ -1.17
GYPB-204ENST00000504951 HDLBPQ00341 1268 aaKnown RBP7.75□□□□□ -1.17
GYPB-204ENST00000504951 KRT24Q2M2I5 525 aa7.75□□□□□ -1.17
GYPB-204ENST00000504951 FKBP1CQ5VVH2 108 aa7.75□□□□□ -1.17
GYPB-204ENST00000504951 DUSP27Q5VZP5 1158 aa7.75□□□□□ -1.17
GYPB-204ENST00000504951 FAM109BQ6ICB4 259 aaPredicted RBP7.75□□□□□ -1.17
GYPB-204ENST00000504951 POTEEQ6S8J3 1075 aa7.75□□□□□ -1.17
GYPB-204ENST00000504951 PXYLP1Q8TE99 480 aa7.75□□□□□ -1.17
GYPB-204ENST00000504951 PTCD2Q8WV60 388 aaKnown RBP7.75□□□□□ -1.17
GYPB-204ENST00000504951 MTMR10Q9NXD2 777 aa7.75□□□□□ -1.17
GYPB-204ENST00000504951 PLA2G2EQ9NZK7 142 aa7.75□□□□□ -1.17
GYPB-204ENST00000504951 FAM205AQ6ZU69 1335 aa7.75□□□□□ -1.17
GYPB-204ENST00000504951 ADGRA2Q96PE1 1338 aa7.75□□□□□ -1.17
GYPB-204ENST00000504951 BTBD19C9JJ37 291 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 H7C1W4 665 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 TBC1D12O60347 775 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 PPATQ06203 517 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 PPIL2Q13356 520 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 SNAPC2Q13487 334 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 VGLL4Q14135 290 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 ANKRD23Q86SG2 305 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 ANKLE1Q8NAG6 615 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 U2AF1L4Q8WU68 220 aaKnown RBP7.74□□□□□ -1.17
GYPB-204ENST00000504951 ZNF428Q96B54 188 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 HOOK2Q96ED9 719 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 MYD88Q99836 296 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 COL25A1Q9BXS0 654 aaPredicted RBP7.74□□□□□ -1.17
GYPB-204ENST00000504951 ARHGAP39Q9C0H5 1083 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 CRISPLD2Q9H0B8 497 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 GREM2Q9H772 168 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 ELP3Q9H9T3 547 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 RIPOR2Q9Y4F9 1068 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 CSADQ9Y600 493 aa7.74□□□□□ -1.17
GYPB-204ENST00000504951 EVI5O60447 810 aa7.73□□□□□ -1.17
GYPB-204ENST00000504951 FARP2O94887 1054 aaPredicted RBP7.73□□□□□ -1.17
GYPB-204ENST00000504951 IGKV5-2P06315 115 aa7.73□□□□□ -1.17
GYPB-204ENST00000504951 OSBPP22059 807 aa7.73□□□□□ -1.17
GYPB-204ENST00000504951 PSMC4P43686 418 aa7.73□□□□□ -1.17
GYPB-204ENST00000504951 TNNI2P48788 182 aa7.73□□□□□ -1.17
GYPB-204ENST00000504951 FOXK1P85037 733 aa7.73□□□□□ -1.17
GYPB-204ENST00000504951 IRF5Q13568 498 aa7.73□□□□□ -1.17
GYPB-204ENST00000504951 PPP4R3BQ5MIZ7 849 aa7.73□□□□□ -1.17
GYPB-204ENST00000504951 KSR2Q6VAB6 950 aa7.73□□□□□ -1.17
GYPB-204ENST00000504951 FAM83AQ86UY5 434 aa7.73□□□□□ -1.17
GYPB-204ENST00000504951 LRCH3Q96II8 777 aa7.73□□□□□ -1.17
GYPB-204ENST00000504951 RNF208Q9H0X6 261 aa7.73□□□□□ -1.17
GYPB-204ENST00000504951 PAK6Q9NQU5 681 aaPredicted RBP7.73□□□□□ -1.17
GYPB-204ENST00000504951 ZNF70Q9UC06 446 aaPredicted RBP7.73□□□□□ -1.17
GYPB-204ENST00000504951 KCNH4Q9UQ05 1017 aa7.73□□□□□ -1.17
GYPB-204ENST00000504951 CLRN2A0PK11 232 aa7.72□□□□□ -1.17
GYPB-204ENST00000504951 BCRP11274 1271 aa7.72□□□□□ -1.17
GYPB-204ENST00000504951 CTGFP29279 349 aa7.72□□□□□ -1.17
GYPB-204ENST00000504951 CHRNDQ07001 517 aa7.72□□□□□ -1.17
GYPB-204ENST00000504951 ZNF804AQ7Z570 1209 aa7.72□□□□□ -1.17
GYPB-204ENST00000504951 DEFB123Q8N688 67 aa7.72□□□□□ -1.17
GYPB-204ENST00000504951 RAET1EQ8TD07 263 aa7.72□□□□□ -1.17
GYPB-204ENST00000504951 FBXW7Q969H0 707 aa7.72□□□□□ -1.17
GYPB-204ENST00000504951 MPHOSPH8Q99549 860 aa7.72□□□□□ -1.17
GYPB-204ENST00000504951 PHAXQ9H814 394 aaKnown RBP7.72□□□□□ -1.17
GYPB-204ENST00000504951 VEZTQ9HBM0 779 aa7.72□□□□□ -1.17
GYPB-204ENST00000504951 STAP2Q9UGK3 403 aa7.72□□□□□ -1.17
GYPB-204ENST00000504951 ZNF112Q9UJU3 913 aa7.72□□□□□ -1.17
GYPB-204ENST00000504951 SNCAIPQ9Y6H5 919 aa7.72□□□□□ -1.17
GYPB-204ENST00000504951 IRF6O14896 467 aa7.71□□□□□ -1.18
GYPB-204ENST00000504951 ITGA6P23229 1130 aa7.71□□□□□ -1.18
GYPB-204ENST00000504951 KLRK1P26718 216 aa7.71□□□□□ -1.18
GYPB-204ENST00000504951 CASP7P55210 303 aa7.71□□□□□ -1.18
GYPB-204ENST00000504951 CCDC30Q5VVM6 783 aa7.71□□□□□ -1.18
GYPB-204ENST00000504951 DZIP1LQ8IYY4 767 aaKnown RBP7.71□□□□□ -1.18
GYPB-204ENST00000504951 TDRD7Q8NHU6 1098 aaKnown RBP7.71□□□□□ -1.18
GYPB-204ENST00000504951 RUNDC1Q96C34 613 aa7.71□□□□□ -1.18
GYPB-204ENST00000504951 CCDC85AQ96PX6 553 aaPredicted RBP7.71□□□□□ -1.18
GYPB-204ENST00000504951 PRDM6Q9NQX0 595 aa7.71□□□□□ -1.18
GYPB-204ENST00000504951 SLC45A1Q9Y2W3 748 aa7.71□□□□□ -1.18
GYPB-204ENST00000504951 PCDHAC2Q9Y5I4 1007 aa7.71□□□□□ -1.18
GYPB-204ENST00000504951 MYPNQ86TC9 1320 aa7.71□□□□□ -1.18
GYPB-204ENST00000504951 MYH3P11055 1940 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 OTOFQ9HC10 1997 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 NEURL1BA8MQ27 555 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 CXCL11O14625 94 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 PPP1R37O75864 691 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 FMNL1O95466 1100 aaPredicted RBP7.7□□□□□ -1.18
GYPB-204ENST00000504951 FCGRTP55899 365 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 NEXNQ0ZGT2 675 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 MOGSQ13724 837 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 NECAB2Q7Z6G3 386 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 CCDC146Q8IYE0 955 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 TDHQ8IZJ6 230 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 MBIPQ9NS73 344 aa7.7□□□□□ -1.18
GYPB-204ENST00000504951 IFT57Q9NWB7 429 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 214.8 ms