RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 CD99L2Q8TCZ2 262 aa11.35□□□□□ -0.59
NFIA-213ENST00000493627 HOOK2Q96ED9 719 aa11.35□□□□□ -0.59
NFIA-213ENST00000493627 GNL3LQ9NVN8 582 aaKnown RBP11.35□□□□□ -0.59
NFIA-213ENST00000493627 CEP126Q9P2H0 1117 aa11.35□□□□□ -0.59
NFIA-213ENST00000493627 PA2G4Q9UQ80 394 aaKnown RBP11.35□□□□□ -0.59
NFIA-213ENST00000493627 HDAC5Q9UQL6 1122 aa11.35□□□□□ -0.59
NFIA-213ENST00000493627 DAGLAQ9Y4D2 1042 aa11.35□□□□□ -0.59
NFIA-213ENST00000493627 SNCAIPQ9Y6H5 919 aa11.35□□□□□ -0.59
NFIA-213ENST00000493627 PDE4DIPQ5VU43 2346 aa11.34□□□□□ -0.59
NFIA-213ENST00000493627 PHKA1P46020 1223 aa11.34□□□□□ -0.59
NFIA-213ENST00000493627 SP3Q02447 781 aa11.34□□□□□ -0.59
NFIA-213ENST00000493627 DCAF15Q66K64 600 aa11.34□□□□□ -0.59
NFIA-213ENST00000493627 ERO1BQ86YB8 467 aa11.34□□□□□ -0.59
NFIA-213ENST00000493627 FAM43AQ8N2R8 423 aa11.34□□□□□ -0.59
NFIA-213ENST00000493627 COPRSQ9NQ92 184 aa11.34□□□□□ -0.59
NFIA-213ENST00000493627 SALL1Q9NSC2 1324 aa11.34□□□□□ -0.59
NFIA-213ENST00000493627 SEMA3EO15041 775 aa11.33□□□□□ -0.6
NFIA-213ENST00000493627 SLC34A2O95436 690 aa11.33□□□□□ -0.6
NFIA-213ENST00000493627 LDHBP07195 334 aaKnown RBP11.33□□□□□ -0.6
NFIA-213ENST00000493627 ADORA1P30542 326 aa11.33□□□□□ -0.6
NFIA-213ENST00000493627 NFIAQ12857 509 aa11.33□□□□□ -0.6
NFIA-213ENST00000493627 TAF1CQ15572 869 aaPredicted RBP11.33□□□□□ -0.6
NFIA-213ENST00000493627 INTS3Q68E01 1043 aaKnown RBP11.33□□□□□ -0.6
NFIA-213ENST00000493627 CDC42EP5Q6NZY7 148 aa11.33□□□□□ -0.6
NFIA-213ENST00000493627 ZKSCAN4Q969J2 545 aaPredicted RBP11.33□□□□□ -0.6
NFIA-213ENST00000493627 ZNF341Q9BYN7 854 aa11.33□□□□□ -0.6
NFIA-213ENST00000493627 EFCC1Q9HA90 598 aa11.33□□□□□ -0.6
NFIA-213ENST00000493627 ZFYVE28Q9HCC9 887 aa11.33□□□□□ -0.6
NFIA-213ENST00000493627 DENND2AQ9ULE3 1009 aa11.33□□□□□ -0.6
NFIA-213ENST00000493627 PTPN22Q9Y2R2 807 aa11.33□□□□□ -0.6
NFIA-213ENST00000493627 IRF6O14896 467 aa11.32□□□□□ -0.6
NFIA-213ENST00000493627 CETPP11597 493 aa11.32□□□□□ -0.6
NFIA-213ENST00000493627 CAP1Q01518 475 aa11.32□□□□□ -0.6
NFIA-213ENST00000493627 TCP10Q12799 353 aa11.32□□□□□ -0.6
NFIA-213ENST00000493627 PPIL2Q13356 520 aa11.32□□□□□ -0.6
NFIA-213ENST00000493627 SNAPC2Q13487 334 aa11.32□□□□□ -0.6
NFIA-213ENST00000493627 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
NFIA-213ENST00000493627 MIGA2Q7L4E1 593 aa11.32□□□□□ -0.6
NFIA-213ENST00000493627 FAM151AQ8WW52 585 aa11.32□□□□□ -0.6
NFIA-213ENST00000493627 ARHGAP45Q92619 1136 aa11.32□□□□□ -0.6
NFIA-213ENST00000493627 SRGAP3O43295 1099 aa11.31□□□□□ -0.6
NFIA-213ENST00000493627 WDHD1O75717 1129 aaPredicted RBP11.31□□□□□ -0.6
NFIA-213ENST00000493627 GNAI3P08754 354 aa11.31□□□□□ -0.6
NFIA-213ENST00000493627 INPP5BP32019 993 aa11.31□□□□□ -0.6
NFIA-213ENST00000493627 MTX1Q13505 466 aa11.31□□□□□ -0.6
NFIA-213ENST00000493627 RASGRF1Q13972 1273 aa11.31□□□□□ -0.6
NFIA-213ENST00000493627 PRPF38BQ5VTL8 546 aaKnown RBP11.31□□□□□ -0.6
NFIA-213ENST00000493627 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
NFIA-213ENST00000493627 ZCCHC17Q9NP64 241 aaKnown RBP11.31□□□□□ -0.6
NFIA-213ENST00000493627 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
NFIA-213ENST00000493627 GAKO14976 1311 aa11.31□□□□□ -0.6
NFIA-213ENST00000493627 PDS5AQ29RF7 1337 aaKnown RBP11.31□□□□□ -0.6
NFIA-213ENST00000493627 RFX7Q2KHR2 1363 aa11.3□□□□□ -0.6
NFIA-213ENST00000493627 CENPFP49454 3210 aa11.3□□□□□ -0.6
NFIA-213ENST00000493627 A0A1B0GUL7 405 aa11.3□□□□□ -0.6
NFIA-213ENST00000493627 BTBD19C9JJ37 291 aa11.3□□□□□ -0.6
NFIA-213ENST00000493627 TRIM27P14373 513 aa11.3□□□□□ -0.6
NFIA-213ENST00000493627 PPATQ06203 517 aa11.3□□□□□ -0.6
NFIA-213ENST00000493627 DZIP1Q86YF9 867 aaKnown RBP11.3□□□□□ -0.6
NFIA-213ENST00000493627 ARMC5Q96C12 935 aa11.3□□□□□ -0.6
NFIA-213ENST00000493627 USP40Q9NVE5 1235 aa11.3□□□□□ -0.6
NFIA-213ENST00000493627 ATRNL1Q5VV63 1379 aa11.29□□□□□ -0.6
NFIA-213ENST00000493627 POTEFA5A3E0 1075 aa11.29□□□□□ -0.6
NFIA-213ENST00000493627 TLR2O60603 784 aa11.29□□□□□ -0.6
NFIA-213ENST00000493627 TIMM10P62072 90 aa11.29□□□□□ -0.6
NFIA-213ENST00000493627 TFCP2Q12800 502 aa11.29□□□□□ -0.6
NFIA-213ENST00000493627 MVPQ14764 893 aaKnown RBP11.29□□□□□ -0.6
NFIA-213ENST00000493627 ARHGEF6Q15052 776 aa11.29□□□□□ -0.6
NFIA-213ENST00000493627 NOL9Q5SY16 702 aaKnown RBP11.29□□□□□ -0.6
NFIA-213ENST00000493627 ATF7IPQ6VMQ6 1270 aa11.29□□□□□ -0.6
NFIA-213ENST00000493627 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.29□□□□□ -0.6
NFIA-213ENST00000493627 XAGE2Q96GT9 111 aa11.29□□□□□ -0.6
NFIA-213ENST00000493627 ZNF112Q9UJU3 913 aa11.29□□□□□ -0.6
NFIA-213ENST00000493627 TNNQ9UQP3 1299 aa11.29□□□□□ -0.6
NFIA-213ENST00000493627 AKAP2Q9Y2D5 859 aa11.29□□□□□ -0.6
NFIA-213ENST00000493627 BRCA2P51587 3418 aa11.28□□□□□ -0.6
NFIA-213ENST00000493627 DOCK2Q92608 1830 aa11.28□□□□□ -0.6
NFIA-213ENST00000493627 IPO8O15397 1037 aaKnown RBP11.28□□□□□ -0.6
NFIA-213ENST00000493627 ENTPD3O75355 529 aa11.28□□□□□ -0.6
NFIA-213ENST00000493627 GNAI2P04899 355 aa11.28□□□□□ -0.6
NFIA-213ENST00000493627 RGS3P49796 1198 aa11.28□□□□□ -0.6
NFIA-213ENST00000493627 ZFPM1Q8IX07 1006 aa11.28□□□□□ -0.6
NFIA-213ENST00000493627 FRAT1Q92837 279 aaPredicted RBP11.28□□□□□ -0.6
NFIA-213ENST00000493627 IDI2Q9BXS1 227 aa11.28□□□□□ -0.6
NFIA-213ENST00000493627 ABCF2Q9UG63 623 aa11.28□□□□□ -0.6
NFIA-213ENST00000493627 KCNH4Q9UQ05 1017 aa11.28□□□□□ -0.6
NFIA-213ENST00000493627 PTCH2Q9Y6C5 1203 aa11.28□□□□□ -0.6
NFIA-213ENST00000493627 RBBP6Q7Z6E9 1792 aaKnown RBP11.28□□□□□ -0.6
NFIA-213ENST00000493627 MKI67P46013 3256 aaKnown RBP11.27□□□□□ -0.61
NFIA-213ENST00000493627 BCAR3O75815 825 aa11.27□□□□□ -0.61
NFIA-213ENST00000493627 BTDP43251 543 aa11.27□□□□□ -0.61
NFIA-213ENST00000493627 LACTBP83111 547 aaPredicted RBP11.27□□□□□ -0.61
NFIA-213ENST00000493627 KIF22Q14807 665 aa11.27□□□□□ -0.61
NFIA-213ENST00000493627 SLC9C1Q4G0N8 1177 aa11.27□□□□□ -0.61
NFIA-213ENST00000493627 SPTY2D1Q68D10 685 aaPredicted RBP11.27□□□□□ -0.61
NFIA-213ENST00000493627 ANKRD23Q86SG2 305 aa11.27□□□□□ -0.61
NFIA-213ENST00000493627 SLF2Q8IX21 1173 aa11.27□□□□□ -0.61
NFIA-213ENST00000493627 CLUAP1Q96AJ1 413 aa11.27□□□□□ -0.61
NFIA-213ENST00000493627 ZNF333Q96JL9 665 aa11.27□□□□□ -0.61
NFIA-213ENST00000493627 ARHGAP39Q9C0H5 1083 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms