RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 A0A1B0GUL7 405 aa9.2□□□□□ -0.94
CPNE1-226ENST00000486021 CETPP11597 493 aa9.2□□□□□ -0.94
CPNE1-226ENST00000486021 TRIM27P14373 513 aa9.2□□□□□ -0.94
CPNE1-226ENST00000486021 PLCG2P16885 1265 aa9.2□□□□□ -0.94
CPNE1-226ENST00000486021 MKRN3Q13064 507 aaKnown RBP9.2□□□□□ -0.94
CPNE1-226ENST00000486021 CCDC102BQ68D86 513 aa9.2□□□□□ -0.94
CPNE1-226ENST00000486021 ERO1BQ86YB8 467 aa9.2□□□□□ -0.94
CPNE1-226ENST00000486021 ERC1Q8IUD2 1116 aa9.2□□□□□ -0.94
CPNE1-226ENST00000486021 ZIC5Q96T25 663 aa9.2□□□□□ -0.94
CPNE1-226ENST00000486021 GPR108Q9NPR9 543 aa9.2□□□□□ -0.94
CPNE1-226ENST00000486021 ABCF2Q9UG63 623 aa9.2□□□□□ -0.94
CPNE1-226ENST00000486021 ZBED9Q6R2W3 1325 aa9.2□□□□□ -0.94
CPNE1-226ENST00000486021 ENTPD3O75355 529 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 TBC1D8O95759 1140 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 BAG3O95817 575 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 GNRH1P01148 92 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 PPATQ06203 517 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 SNAPC2Q13487 334 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 FBXO46Q6PJ61 603 aaPredicted RBP9.19□□□□□ -0.94
CPNE1-226ENST00000486021 NBPF11Q86T75 865 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 ITPRIPQ8IWB1 547 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 ZSCAN29Q8IWY8 852 aaPredicted RBP9.19□□□□□ -0.94
CPNE1-226ENST00000486021 ZNF296Q8WUU4 475 aaPredicted RBP9.19□□□□□ -0.94
CPNE1-226ENST00000486021 CLUAP1Q96AJ1 413 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 OPTNQ96CV9 577 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 XAGE2Q96GT9 111 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 TBC1D2Q9BYX2 928 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 ELP3Q9H9T3 547 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 USP40Q9NVE5 1235 aa9.19□□□□□ -0.94
CPNE1-226ENST00000486021 TESPA1A2RU30 521 aaPredicted RBP9.18□□□□□ -0.94
CPNE1-226ENST00000486021 HMMRO75330 724 aa9.18□□□□□ -0.94
CPNE1-226ENST00000486021 BCAR3O75815 825 aa9.18□□□□□ -0.94
CPNE1-226ENST00000486021 RGS19P49795 217 aa9.18□□□□□ -0.94
CPNE1-226ENST00000486021 TIMM10P62072 90 aa9.18□□□□□ -0.94
CPNE1-226ENST00000486021 SP3Q02447 781 aa9.18□□□□□ -0.94
CPNE1-226ENST00000486021 TAF1CQ15572 869 aaPredicted RBP9.18□□□□□ -0.94
CPNE1-226ENST00000486021 TTC39AQ5SRH9 613 aa9.18□□□□□ -0.94
CPNE1-226ENST00000486021 MAST2Q6P0Q8 1798 aa9.18□□□□□ -0.94
CPNE1-226ENST00000486021 MIER1Q8N108 512 aa9.18□□□□□ -0.94
CPNE1-226ENST00000486021 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.18□□□□□ -0.948e-6■■□□□ 11.7
CPNE1-226ENST00000486021 FAM163AQ96GL9 167 aaPredicted RBP9.18□□□□□ -0.94
CPNE1-226ENST00000486021 WRNIP1Q96S55 665 aa9.18□□□□□ -0.94
CPNE1-226ENST00000486021 TMEM39BQ9GZU3 492 aa9.18□□□□□ -0.94
CPNE1-226ENST00000486021 LRP2BPQ9P2M1 347 aa9.18□□□□□ -0.94
CPNE1-226ENST00000486021 PA2G4Q9UQ80 394 aaKnown RBP9.18□□□□□ -0.94
CPNE1-226ENST00000486021 ATAD5Q96QE3 1844 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 CCL15-CCL14A0A0B4J2E2 113 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 SPDYE5A6NIY4 337 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 HOXD10P28358 340 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 PHKA1P46020 1223 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 PRMT2P55345 433 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 ATP8B2P98198 1209 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 TFCP2Q12800 502 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 PPIL2Q13356 520 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 CCL15Q16663 113 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 APOBEC3HQ6NTF7 200 aaKnown RBP9.17□□□□□ -0.94
CPNE1-226ENST00000486021 OTUD5Q96G74 571 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 TEPSINQ96N21 525 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 IDI2Q9BXS1 227 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 PICK1Q9NRD5 415 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 DAGLAQ9Y4D2 1042 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 DOCK1Q14185 1865 aa9.17□□□□□ -0.94
CPNE1-226ENST00000486021 NPM3O75607 178 aaKnown RBP9.16□□□□□ -0.94
CPNE1-226ENST00000486021 SURF6O75683 361 aaKnown RBP9.16□□□□□ -0.94
CPNE1-226ENST00000486021 ARID4AP29374 1257 aaPredicted RBP9.16□□□□□ -0.94
CPNE1-226ENST00000486021 PRDX5P30044 214 aa9.16□□□□□ -0.94
CPNE1-226ENST00000486021 VGLL4Q14135 290 aa9.16□□□□□ -0.94
CPNE1-226ENST00000486021 CDC42EP5Q6NZY7 148 aa9.16□□□□□ -0.94
CPNE1-226ENST00000486021 FASTKD5Q7L8L6 764 aaKnown RBP9.16□□□□□ -0.94
CPNE1-226ENST00000486021 TMEM57Q8N5G2 664 aa9.16□□□□□ -0.94
CPNE1-226ENST00000486021 SPATA5Q8NB90 893 aa9.16□□□□□ -0.94
CPNE1-226ENST00000486021 CLMNQ96JQ2 1002 aa9.16□□□□□ -0.94
CPNE1-226ENST00000486021 TRIM34Q9BYJ4 488 aa9.16□□□□□ -0.94
CPNE1-226ENST00000486021 EFCC1Q9HA90 598 aa9.16□□□□□ -0.94
CPNE1-226ENST00000486021 RAI14Q9P0K7 980 aa9.16□□□□□ -0.94
CPNE1-226ENST00000486021 DDX19BQ9UMR2 479 aa9.16□□□□□ -0.94
CPNE1-226ENST00000486021 PCDHAC2Q9Y5I4 1007 aa9.16□□□□□ -0.94
CPNE1-226ENST00000486021 FOCADQ5VW36 1801 aa9.16□□□□□ -0.94
CPNE1-226ENST00000486021 SSC5DA1L4H1 1573 aa9.16□□□□□ -0.94
CPNE1-226ENST00000486021 MYH1P12882 1939 aa9.15□□□□□ -0.94
CPNE1-226ENST00000486021 MGAMO43451 1857 aa9.15□□□□□ -0.94
CPNE1-226ENST00000486021 MROH7-TTC4A0A0A0MT08 1334 aa9.15□□□□□ -0.94
CPNE1-226ENST00000486021 TCP10Q12799 353 aa9.15□□□□□ -0.94
CPNE1-226ENST00000486021 TTF1Q15361 905 aaPredicted RBP9.15□□□□□ -0.94
CPNE1-226ENST00000486021 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.15□□□□□ -0.94
CPNE1-226ENST00000486021 RPAP2Q8IXW5 612 aaPredicted RBP9.15□□□□□ -0.94
CPNE1-226ENST00000486021 SSH3Q8TE77 659 aa9.15□□□□□ -0.94
CPNE1-226ENST00000486021 TMEM106CQ9BVX2 250 aa9.15□□□□□ -0.94
CPNE1-226ENST00000486021 DHX36Q9H2U1 1008 aaKnown RBP9.15□□□□□ -0.94
CPNE1-226ENST00000486021 AS3MTQ9HBK9 375 aa9.15□□□□□ -0.94
CPNE1-226ENST00000486021 TRIM17Q9Y577 477 aa9.15□□□□□ -0.94
CPNE1-226ENST00000486021 RBBP6Q7Z6E9 1792 aaKnown RBP9.14□□□□□ -0.95
CPNE1-226ENST00000486021 GAKO14976 1311 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 MYH8P13535 1937 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 GPR75-ASB3A0A0A6YYF3 556 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 CXCL11O14625 94 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 TBC1D12O60347 775 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 CTNND1O60716 968 aaKnown RBP9.14□□□□□ -0.95
CPNE1-226ENST00000486021 CAPN2P17655 700 aa9.14□□□□□ -0.95
CPNE1-226ENST00000486021 BTDP43251 543 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms