RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 FAM43AQ8N2R8 423 aa22.42■■□□□ 1.18
ATG4B-221ENST00000483778 WRNIP1Q96S55 665 aa22.42■■□□□ 1.18
ATG4B-221ENST00000483778 TMOD2Q9NZR1 351 aa22.42■■□□□ 1.18
ATG4B-221ENST00000483778 CSADQ9Y600 493 aa22.42■■□□□ 1.18
ATG4B-221ENST00000483778 ZSWIM8A7E2V4 1837 aa22.42■■□□□ 1.18
ATG4B-221ENST00000483778 CCL15-CCL14A0A0B4J2E2 113 aa22.41■■□□□ 1.18
ATG4B-221ENST00000483778 LDHBP07195 334 aaKnown RBP22.41■■□□□ 1.18
ATG4B-221ENST00000483778 TRIM27P14373 513 aa22.41■■□□□ 1.18
ATG4B-221ENST00000483778 INPP5BP32019 993 aa22.41■■□□□ 1.18
ATG4B-221ENST00000483778 TFCP2Q12800 502 aa22.41■■□□□ 1.18
ATG4B-221ENST00000483778 CCL15Q16663 113 aa22.41■■□□□ 1.18
ATG4B-221ENST00000483778 FAM198AQ9UFP1 575 aa22.41■■□□□ 1.18
ATG4B-221ENST00000483778 SPDYE5A6NIY4 337 aa22.4■■□□□ 1.18
ATG4B-221ENST00000483778 SRGAP3O43295 1099 aa22.4■■□□□ 1.18
ATG4B-221ENST00000483778 OTUD7BQ6GQQ9 843 aa22.4■■□□□ 1.18
ATG4B-221ENST00000483778 FAM151AQ8WW52 585 aa22.4■■□□□ 1.18
ATG4B-221ENST00000483778 CLUAP1Q96AJ1 413 aa22.4■■□□□ 1.18
ATG4B-221ENST00000483778 KIAA0100Q14667 2235 aaKnown RBP22.39■■□□□ 1.18
ATG4B-221ENST00000483778 GTF2A2P52657 109 aa22.39■■□□□ 1.17
ATG4B-221ENST00000483778 FRAT1Q92837 279 aaPredicted RBP22.39■■□□□ 1.17
ATG4B-221ENST00000483778 USP40Q9NVE5 1235 aa22.39■■□□□ 1.17
ATG4B-221ENST00000483778 GNL3LQ9NVN8 582 aaKnown RBP22.39■■□□□ 1.17
ATG4B-221ENST00000483778 DENND2AQ9ULE3 1009 aa22.39■■□□□ 1.17
ATG4B-221ENST00000483778 CENPFP49454 3210 aa22.39■■□□□ 1.17
ATG4B-221ENST00000483778 SALL1Q9NSC2 1324 aa22.38■■□□□ 1.17
ATG4B-221ENST00000483778 IRF6O14896 467 aa22.38■■□□□ 1.17
ATG4B-221ENST00000483778 GNAI3P08754 354 aa22.38■■□□□ 1.17
ATG4B-221ENST00000483778 SLURP2P0DP57 97 aa22.38■■□□□ 1.17
ATG4B-221ENST00000483778 SP3Q02447 781 aa22.38■■□□□ 1.17
ATG4B-221ENST00000483778 MTX1Q13505 466 aa22.38■■□□□ 1.17
ATG4B-221ENST00000483778 RASGRF1Q13972 1273 aa22.38■■□□□ 1.17
ATG4B-221ENST00000483778 ERO1BQ86YB8 467 aa22.38■■□□□ 1.17
ATG4B-221ENST00000483778 HDAC5Q9UQL6 1122 aa22.38■■□□□ 1.17
ATG4B-221ENST00000483778 PNMA6EA0A0J9YXQ4 647 aa22.37■■□□□ 1.17
ATG4B-221ENST00000483778 A0A1B0GUL7 405 aa22.37■■□□□ 1.17
ATG4B-221ENST00000483778 TAF1CQ15572 869 aaPredicted RBP22.37■■□□□ 1.17
ATG4B-221ENST00000483778 ATF7IPQ6VMQ6 1270 aa22.37■■□□□ 1.17
ATG4B-221ENST00000483778 MIER1Q8N108 512 aa22.37■■□□□ 1.17
ATG4B-221ENST00000483778 XAGE2Q96GT9 111 aa22.37■■□□□ 1.17
ATG4B-221ENST00000483778 PTPN22Q9Y2R2 807 aa22.37■■□□□ 1.17
ATG4B-221ENST00000483778 BTBD19C9JJ37 291 aa22.36■■□□□ 1.17
ATG4B-221ENST00000483778 SEMA3EO15041 775 aa22.36■■□□□ 1.17
ATG4B-221ENST00000483778 ERO1AQ96HE7 468 aa22.36■■□□□ 1.17
ATG4B-221ENST00000483778 ZNF341Q9BYN7 854 aa22.36■■□□□ 1.17
ATG4B-221ENST00000483778 ZNF112Q9UJU3 913 aa22.36■■□□□ 1.17
ATG4B-221ENST00000483778 RPAP1Q9BWH6 1393 aaPredicted RBP22.36■■□□□ 1.17
ATG4B-221ENST00000483778 DCAF15Q66K64 600 aa22.35■■□□□ 1.17
ATG4B-221ENST00000483778 SH3BP5LQ7L8J4 393 aa22.35■■□□□ 1.17
ATG4B-221ENST00000483778 ZNF384Q8TF68 577 aa22.35■■□□□ 1.17
ATG4B-221ENST00000483778 IPO8O15397 1037 aaKnown RBP22.34■■□□□ 1.17
ATG4B-221ENST00000483778 PI16Q6UXB8 463 aa22.34■■□□□ 1.17
ATG4B-221ENST00000483778 TMEM57Q8N5G2 664 aa22.34■■□□□ 1.17
ATG4B-221ENST00000483778 EFCC1Q9HA90 598 aa22.34■■□□□ 1.17
ATG4B-221ENST00000483778 ZFYVE28Q9HCC9 887 aa22.34■■□□□ 1.17
ATG4B-221ENST00000483778 ABCF2Q9UG63 623 aa22.34■■□□□ 1.17
ATG4B-221ENST00000483778 DOCK2Q92608 1830 aa22.34■■□□□ 1.17
ATG4B-221ENST00000483778 MYO5AQ9Y4I1 1855 aaKnown RBP22.33■■□□□ 1.17
ATG4B-221ENST00000483778 POTEFA5A3E0 1075 aa22.33■■□□□ 1.17
ATG4B-221ENST00000483778 ZBTB22O15209 634 aa22.33■■□□□ 1.17
ATG4B-221ENST00000483778 CETPP11597 493 aa22.33■■□□□ 1.17
ATG4B-221ENST00000483778 PPIL2Q13356 520 aa22.33■■□□□ 1.17
ATG4B-221ENST00000483778 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.33■■□□□ 1.17
ATG4B-221ENST00000483778 HOOK2Q96ED9 719 aa22.33■■□□□ 1.17
ATG4B-221ENST00000483778 NEUROD6Q96NK8 337 aa22.33■■□□□ 1.17
ATG4B-221ENST00000483778 ARHGAP39Q9C0H5 1083 aa22.33■■□□□ 1.17
ATG4B-221ENST00000483778 GAKO14976 1311 aa22.32■■□□□ 1.16
ATG4B-221ENST00000483778 GNAI2P04899 355 aa22.32■■□□□ 1.16
ATG4B-221ENST00000483778 RGS3P49796 1198 aa22.32■■□□□ 1.16
ATG4B-221ENST00000483778 SNAPC2Q13487 334 aa22.32■■□□□ 1.16
ATG4B-221ENST00000483778 TBC1D9Q6ZT07 1266 aa22.32■■□□□ 1.16
ATG4B-221ENST00000483778 DDX4Q9NQI0 724 aaKnown RBP22.32■■□□□ 1.16
ATG4B-221ENST00000483778 ATRNL1Q5VV63 1379 aa22.31■■□□□ 1.16
ATG4B-221ENST00000483778 PHF20L1A8MW92 1017 aa22.31■■□□□ 1.16
ATG4B-221ENST00000483778 MOGSQ13724 837 aa22.31■■□□□ 1.16
ATG4B-221ENST00000483778 HMG20BQ9P0W2 317 aa22.31■■□□□ 1.16
ATG4B-221ENST00000483778 AKAP2Q9Y2D5 859 aa22.31■■□□□ 1.16
ATG4B-221ENST00000483778 DDTLA6NHG4 134 aaPredicted RBP22.3■■□□□ 1.16
ATG4B-221ENST00000483778 WDHD1O75717 1129 aaPredicted RBP22.3■■□□□ 1.16
ATG4B-221ENST00000483778 ECM2O94769 699 aaPredicted RBP22.3■■□□□ 1.16
ATG4B-221ENST00000483778 MECOMQ03112 1051 aa22.3■■□□□ 1.16
ATG4B-221ENST00000483778 PPATQ06203 517 aa22.3■■□□□ 1.16
ATG4B-221ENST00000483778 FAM163AQ96GL9 167 aaPredicted RBP22.3■■□□□ 1.16
ATG4B-221ENST00000483778 IDI2Q9BXS1 227 aa22.3■■□□□ 1.16
ATG4B-221ENST00000483778 PHIPQ8WWQ0 1821 aa22.29■■□□□ 1.16
ATG4B-221ENST00000483778 RFX7Q2KHR2 1363 aa22.29■■□□□ 1.16
ATG4B-221ENST00000483778 TLR2O60603 784 aa22.29■■□□□ 1.16
ATG4B-221ENST00000483778 DZIP1Q86YF9 867 aaKnown RBP22.29■■□□□ 1.16
ATG4B-221ENST00000483778 PDS5AQ29RF7 1337 aaKnown RBP22.29■■□□□ 1.16
ATG4B-221ENST00000483778 PTPRFP10586 1907 aa22.28■■□□□ 1.16
ATG4B-221ENST00000483778 RLBP1P12271 317 aa22.28■■□□□ 1.16
ATG4B-221ENST00000483778 CTGFP29279 349 aa22.28■■□□□ 1.16
ATG4B-221ENST00000483778 BTDP43251 543 aa22.28■■□□□ 1.16
ATG4B-221ENST00000483778 HNRNPUQ00839 825 aaKnown RBP eCLIP22.28■■□□□ 1.16
ATG4B-221ENST00000483778 MVPQ14764 893 aaKnown RBP22.28■■□□□ 1.16
ATG4B-221ENST00000483778 ZGPATQ8N5A5 531 aaKnown RBP22.28■■□□□ 1.16
ATG4B-221ENST00000483778 KCNH4Q9UQ05 1017 aa22.28■■□□□ 1.16
ATG4B-221ENST00000483778 PTCH2Q9Y6C5 1203 aa22.28■■□□□ 1.16
ATG4B-221ENST00000483778 RBBP6Q7Z6E9 1792 aaKnown RBP22.27■■□□□ 1.16
ATG4B-221ENST00000483778 MKI67P46013 3256 aaKnown RBP22.27■■□□□ 1.16
ATG4B-221ENST00000483778 ENTPD3O75355 529 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms