RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 CD68P34810 354 aaPredicted RBP9.68□□□□□ -0.86
CLK1-212ENST00000482590 TTC39BQ5VTQ0 682 aaPredicted RBP9.68□□□□□ -0.86
CLK1-212ENST00000482590 ARMC10Q8N2F6 343 aa9.68□□□□□ -0.86
CLK1-212ENST00000482590 GPR152Q8TDT2 470 aa9.68□□□□□ -0.86
CLK1-212ENST00000482590 FNDC3AQ9Y2H6 1198 aaKnown RBP9.68□□□□□ -0.86
CLK1-212ENST00000482590 PTCD1O75127 700 aaKnown RBP9.67□□□□□ -0.86
CLK1-212ENST00000482590 KIF4AO95239 1232 aa9.67□□□□□ -0.86
CLK1-212ENST00000482590 MED26O95402 600 aa9.67□□□□□ -0.86
CLK1-212ENST00000482590 IGLV1-40P01703 118 aa9.67□□□□□ -0.86
CLK1-212ENST00000482590 CYP2E1P05181 493 aaPredicted RBP9.67□□□□□ -0.86
CLK1-212ENST00000482590 CDC25BP30305 580 aa9.67□□□□□ -0.86
CLK1-212ENST00000482590 SCNN1AP37088 669 aa9.67□□□□□ -0.86
CLK1-212ENST00000482590 MCTP1Q6DN14 999 aa9.67□□□□□ -0.86
CLK1-212ENST00000482590 ACAD11Q709F0 780 aa9.67□□□□□ -0.86
CLK1-212ENST00000482590 CARD10Q9BWT7 1032 aa9.67□□□□□ -0.86
CLK1-212ENST00000482590 STIM2Q9P246 746 aa9.67□□□□□ -0.86
CLK1-212ENST00000482590 STOML1Q9UBI4 398 aa9.67□□□□□ -0.86
CLK1-212ENST00000482590 XIRP1Q702N8 1843 aaKnown RBP9.67□□□□□ -0.86
CLK1-212ENST00000482590 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.66□□□□□ -0.86
CLK1-212ENST00000482590 TMEM164Q5U3C3 297 aa9.66□□□□□ -0.86
CLK1-212ENST00000482590 ANKLE2Q86XL3 938 aa9.66□□□□□ -0.86
CLK1-212ENST00000482590 THEMISQ8N1K5 641 aaPredicted RBP9.66□□□□□ -0.86
CLK1-212ENST00000482590 ABI2Q9NYB9 513 aaPredicted RBP9.66□□□□□ -0.86
CLK1-212ENST00000482590 MED1Q15648 1581 aaPredicted RBP9.66□□□□□ -0.86
CLK1-212ENST00000482590 MYO5BQ9ULV0 1848 aa9.66□□□□□ -0.86
CLK1-212ENST00000482590 KIF15Q9NS87 1388 aa9.65□□□□□ -0.86
CLK1-212ENST00000482590 FSCN2O14926 492 aa9.65□□□□□ -0.86
CLK1-212ENST00000482590 GSC2O15499 205 aa9.65□□□□□ -0.86
CLK1-212ENST00000482590 DHX15O43143 795 aaKnown RBP9.65□□□□□ -0.86
CLK1-212ENST00000482590 KIAA1211Q6ZU35 1233 aa9.65□□□□□ -0.86
CLK1-212ENST00000482590 FOXD4L4Q8WXT5 416 aaPredicted RBP9.65□□□□□ -0.86
CLK1-212ENST00000482590 PBX4Q9BYU1 374 aa9.65□□□□□ -0.86
CLK1-212ENST00000482590 DAPK1P53355 1430 aa9.65□□□□□ -0.87
CLK1-212ENST00000482590 ATG7O95352 703 aa9.64□□□□□ -0.87
CLK1-212ENST00000482590 TGFB1P01137 390 aa9.64□□□□□ -0.87
CLK1-212ENST00000482590 EPHA1P21709 976 aa9.64□□□□□ -0.87
CLK1-212ENST00000482590 KRTAP19-1Q8IUB9 90 aa9.64□□□□□ -0.87
CLK1-212ENST00000482590 CEP120Q8N960 986 aa9.64□□□□□ -0.87
CLK1-212ENST00000482590 ZNF428Q96B54 188 aa9.64□□□□□ -0.87
CLK1-212ENST00000482590 CEP41Q9BYV8 373 aa9.64□□□□□ -0.87
CLK1-212ENST00000482590 SH2B1Q9NRF2 756 aaPredicted RBP9.64□□□□□ -0.87
CLK1-212ENST00000482590 SCAF11Q99590 1463 aaKnown RBP9.64□□□□□ -0.87
CLK1-212ENST00000482590 GCC2Q8IWJ2 1684 aa9.64□□□□□ -0.87
CLK1-212ENST00000482590 FGD6Q6ZV73 1430 aa9.64□□□□□ -0.87
CLK1-212ENST00000482590 SLIT1O75093 1534 aa9.63□□□□□ -0.87
CLK1-212ENST00000482590 TOM1O60784 492 aa9.63□□□□□ -0.87
CLK1-212ENST00000482590 KLHL23Q8NBE8 558 aa9.63□□□□□ -0.87
CLK1-212ENST00000482590 CLP1Q92989 425 aaKnown RBP9.63□□□□□ -0.87
CLK1-212ENST00000482590 FAM46AQ96IP4 442 aaKnown RBP9.63□□□□□ -0.87
CLK1-212ENST00000482590 ABCC5O15440 1437 aa9.63□□□□□ -0.87
CLK1-212ENST00000482590 ARHGAP31Q2M1Z3 1444 aa9.63□□□□□ -0.87
CLK1-212ENST00000482590 KANK1Q14678 1352 aa9.63□□□□□ -0.87
CLK1-212ENST00000482590 EFCAB6Q5THR3 1501 aa9.62□□□□□ -0.87
CLK1-212ENST00000482590 KIAA1324LA8MWY0 1029 aaPredicted RBP9.62□□□□□ -0.87
CLK1-212ENST00000482590 E9PSI1 815 aa9.62□□□□□ -0.87
CLK1-212ENST00000482590 DDX3YO15523 660 aaKnown RBP9.62□□□□□ -0.87
CLK1-212ENST00000482590 ADAM11O75078 769 aa9.62□□□□□ -0.87
CLK1-212ENST00000482590 UVSSAQ2YD98 709 aa9.62□□□□□ -0.87
CLK1-212ENST00000482590 NCAPG2Q86XI2 1143 aa9.62□□□□□ -0.87
CLK1-212ENST00000482590 UTP4Q969X6 686 aaKnown RBP9.62□□□□□ -0.87
CLK1-212ENST00000482590 POP1Q99575 1024 aaKnown RBP9.62□□□□□ -0.87
CLK1-212ENST00000482590 GZF1Q9H116 711 aaPredicted RBP9.62□□□□□ -0.87
CLK1-212ENST00000482590 TMEM63CQ9P1W3 806 aa9.62□□□□□ -0.87
CLK1-212ENST00000482590 SLAIN2Q9P270 581 aa9.62□□□□□ -0.87
CLK1-212ENST00000482590 ALKQ9UM73 1620 aa9.62□□□□□ -0.87
CLK1-212ENST00000482590 ARHGAP23Q9P227 1491 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 COBLO75128 1261 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 PIP4K2BP78356 416 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 DUOXA2Q1HG44 320 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 FAM117BQ6P1L5 589 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 ZDHHC13Q8IUH4 622 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 ABTB2Q8N961 1025 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 ADAM19Q9H013 955 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 C7orf69Q9H7B7 122 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 ELP3Q9H9T3 547 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.61□□□□□ -0.87
CLK1-212ENST00000482590 ADGRB3O60242 1522 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 LMTK2Q8IWU2 1503 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 LRRC7Q96NW7 1537 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 TET3O43151 1660 aa9.61□□□□□ -0.87
CLK1-212ENST00000482590 PTPRAP18433 802 aa9.6□□□□□ -0.87
CLK1-212ENST00000482590 NFIAQ12857 509 aa9.6□□□□□ -0.87
CLK1-212ENST00000482590 PDE12Q6L8Q7 609 aaKnown RBP9.6□□□□□ -0.87
CLK1-212ENST00000482590 TRIM42Q8IWZ5 723 aa9.6□□□□□ -0.87
CLK1-212ENST00000482590 UBASH3BQ8TF42 649 aa9.6□□□□□ -0.87
CLK1-212ENST00000482590 NUDT16Q96DE0 195 aaKnown RBP9.6□□□□□ -0.87
CLK1-212ENST00000482590 KLHDC7BQ96G42 594 aa9.6□□□□□ -0.87
CLK1-212ENST00000482590 CNTN3Q9P232 1028 aa9.6□□□□□ -0.87
CLK1-212ENST00000482590 ANKRD30AQ9BXX3 1397 aa9.6□□□□□ -0.87
CLK1-212ENST00000482590 HMX2A2RU54 273 aa9.59□□□□□ -0.87
CLK1-212ENST00000482590 ATCAYQ86WG3 371 aa9.59□□□□□ -0.87
CLK1-212ENST00000482590 MYRFLQ96LU7 910 aa9.59□□□□□ -0.87
CLK1-212ENST00000482590 GOLGA2P5Q9HBQ8 144 aa9.59□□□□□ -0.87
CLK1-212ENST00000482590 SEC31BQ9NQW1 1179 aa9.59□□□□□ -0.87
CLK1-212ENST00000482590 KANSL3Q9P2N6 904 aa9.59□□□□□ -0.87
CLK1-212ENST00000482590 SEPT3Q9UH03 358 aa9.59□□□□□ -0.87
CLK1-212ENST00000482590 ADGRL2O95490 1459 aa9.59□□□□□ -0.87
CLK1-212ENST00000482590 UNC13BO14795 1591 aa9.58□□□□□ -0.88
CLK1-212ENST00000482590 RRP7BPQ9NSQ0 103 aa9.58□□□□□ -0.88
CLK1-212ENST00000482590 SERPINA10Q9UK55 444 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms