RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 DHX16O60231 1041 aaKnown RBP12.57□□□□□ -0.4
VPS52-217ENST00000478934 ARID4AP29374 1257 aaPredicted RBP12.57□□□□□ -0.4
VPS52-217ENST00000478934 UBE3CQ15386 1083 aa12.57□□□□□ -0.4
VPS52-217ENST00000478934 PTPN21Q16825 1174 aa12.57□□□□□ -0.4
VPS52-217ENST00000478934 ANO1Q5XXA6 986 aa12.57□□□□□ -0.4
VPS52-217ENST00000478934 KRT40Q6A162 431 aa12.57□□□□□ -0.4
VPS52-217ENST00000478934 IFNL3Q8IZI9 196 aa12.57□□□□□ -0.4
VPS52-217ENST00000478934 LCORLQ8N3X6 602 aa12.57□□□□□ -0.4
VPS52-217ENST00000478934 LPIN2Q92539 896 aa12.57□□□□□ -0.4
VPS52-217ENST00000478934 MAP7D2Q96T17 732 aa12.57□□□□□ -0.4
VPS52-217ENST00000478934 TOMM22Q9NS69 142 aa12.57□□□□□ -0.4
VPS52-217ENST00000478934 ITGB4P16144 1822 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 TNNT1P13805 278 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 GTF2F1P35269 517 aaKnown RBP eCLIP12.56□□□□□ -0.4
VPS52-217ENST00000478934 ATP6V1AP38606 617 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 ITPK1Q13572 414 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 TPD52L1Q16890 204 aaPredicted RBP12.56□□□□□ -0.4
VPS52-217ENST00000478934 SPECC1Q5M775 1068 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 SYNE3Q6ZMZ3 975 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 TICAM2Q86XR7 235 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 VPS37DQ86XT2 251 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 LY9Q9HBG7 655 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 CTAGE5O15320 804 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 ZNF202O95125 648 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 PFKFB1P16118 471 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 IL6STP40189 918 aaPredicted RBP12.56□□□□□ -0.4
VPS52-217ENST00000478934 CRKLP46109 303 aaKnown RBP12.56□□□□□ -0.4
VPS52-217ENST00000478934 TTF1Q15361 905 aaPredicted RBP12.56□□□□□ -0.4
VPS52-217ENST00000478934 TMEM67Q5HYA8 995 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 MPHOSPH8Q99549 860 aa12.56□□□□□ -0.4
VPS52-217ENST00000478934 ZMYM6O95789 1325 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 SPEF2Q9C093 1822 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 GSG1L2A8MUP6 293 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 TPM3P06753 285 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 EIF5P55010 431 aaKnown RBP12.55□□□□□ -0.4
VPS52-217ENST00000478934 NTRK3Q16288 839 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 ADGRA1Q86SQ6 560 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 POLR3EQ9NVU0 708 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 ANO10Q9NW15 660 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.55□□□□□ -0.4
VPS52-217ENST00000478934 V9GYY5 206 aaPredicted RBP12.55□□□□□ -0.4
VPS52-217ENST00000478934 DISP2A7MBM2 1401 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 IFIT3O14879 490 aaKnown RBP12.55□□□□□ -0.4
VPS52-217ENST00000478934 U2AF2P26368 475 aaKnown RBP eCLIP12.55□□□□□ -0.41e-8■■■□□ 17.8
VPS52-217ENST00000478934 ATL3Q6DD88 541 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 C3orf67Q6ZVT6 689 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 LRRC8AQ8IWT6 810 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 ZNF512BQ96KM6 892 aaPredicted RBP12.55□□□□□ -0.4
VPS52-217ENST00000478934 SLC26A6Q9BXS9 759 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 NAPBQ9H115 298 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 KIAA1468Q9P260 1216 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 KCNJ14Q9UNX9 436 aa12.55□□□□□ -0.4
VPS52-217ENST00000478934 LRP6O75581 1613 aa12.54□□□□□ -0.4
VPS52-217ENST00000478934 GOLGA8AA7E2F4 631 aa12.54□□□□□ -0.4
VPS52-217ENST00000478934 PATL2C9JE40 543 aaKnown RBP12.54□□□□□ -0.4
VPS52-217ENST00000478934 ZBTB43O43298 467 aa12.54□□□□□ -0.4
VPS52-217ENST00000478934 KCNQ2O43526 872 aa12.54□□□□□ -0.4
VPS52-217ENST00000478934 CCDC94Q9BW85 323 aaPredicted RBP12.54□□□□□ -0.4
VPS52-217ENST00000478934 COL4A1P02462 1669 aa12.54□□□□□ -0.4
VPS52-217ENST00000478934 A0A1W2PQ27 194 aa12.54□□□□□ -0.4
VPS52-217ENST00000478934 A0A1W2PQ64 194 aa12.54□□□□□ -0.4
VPS52-217ENST00000478934 A0A1W2PQD8 194 aa12.54□□□□□ -0.4
VPS52-217ENST00000478934 ERVV-1B6SEH8 477 aa12.54□□□□□ -0.4
VPS52-217ENST00000478934 SHC4Q6S5L8 630 aa12.54□□□□□ -0.4
VPS52-217ENST00000478934 NBPF11Q86T75 865 aa12.54□□□□□ -0.4
VPS52-217ENST00000478934 KCNG4Q8TDN1 519 aa12.54□□□□□ -0.4
VPS52-217ENST00000478934 SDR42E1Q8WUS8 393 aa12.54□□□□□ -0.4
VPS52-217ENST00000478934 NIP7Q9Y221 180 aaKnown RBP eCLIP12.54□□□□□ -0.4
VPS52-217ENST00000478934 SLC5A1P13866 664 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 EVX2Q03828 476 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 GRIN1Q05586 938 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 GNL2Q13823 731 aaKnown RBP12.53□□□□□ -0.4
VPS52-217ENST00000478934 CEP57L1Q8IYX8 460 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 PKNOX2Q96KN3 472 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 UTP14AQ9BVJ6 771 aaKnown RBP12.53□□□□□ -0.4
VPS52-217ENST00000478934 SLC4A4Q9Y6R1 1079 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 CYP2D7A0A087X1C5 515 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 hCG_1642624A0A1W2PR95 340 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 FOXN1O15353 648 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 YEATS4O95619 227 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 SLC3A2P08195 630 aaKnown RBP12.53□□□□□ -0.4
VPS52-217ENST00000478934 UQCRFS1P1P0C7P4 283 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 SKILP12757 684 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 IARSP41252 1262 aaKnown RBP12.53□□□□□ -0.4
VPS52-217ENST00000478934 GYG1P46976 350 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 SLC39A14Q15043 492 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 SARM1Q6SZW1 724 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 BRAPQ7Z569 592 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.53□□□□□ -0.4
VPS52-217ENST00000478934 PDCL2Q8N4E4 241 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 MARCH10Q8NA82 808 aaPredicted RBP12.53□□□□□ -0.4
VPS52-217ENST00000478934 CCDC87Q9NVE4 849 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 MROH5Q6ZUA9 1318 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 ABCC12Q96J65 1359 aa12.53□□□□□ -0.4
VPS52-217ENST00000478934 CCDC69A6NI79 296 aa12.52□□□□□ -0.4
VPS52-217ENST00000478934 BTBD18B2RXH4 712 aa12.52□□□□□ -0.4
VPS52-217ENST00000478934 IGSF3O75054 1194 aa12.52□□□□□ -0.4
VPS52-217ENST00000478934 CAMTA2O94983 1202 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms