RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 SLURP2P0DP57 97 aa14.52□□□□□ -0.09
VARS2-208ENST00000477052 GTF2A2P52657 109 aa14.52□□□□□ -0.09
VARS2-208ENST00000477052 FAM83AQ86UY5 434 aa14.52□□□□□ -0.09
VARS2-208ENST00000477052 ERO1AQ96HE7 468 aa14.52□□□□□ -0.09
VARS2-208ENST00000477052 EFCC1Q9HA90 598 aa14.52□□□□□ -0.09
VARS2-208ENST00000477052 USP40Q9NVE5 1235 aa14.52□□□□□ -0.09
VARS2-208ENST00000477052 PTPN22Q9Y2R2 807 aa14.52□□□□□ -0.09
VARS2-208ENST00000477052 SUGT1Q9Y2Z0 365 aa14.52□□□□□ -0.09
VARS2-208ENST00000477052 ZSWIM8A7E2V4 1837 aa14.51□□□□□ -0.09
VARS2-208ENST00000477052 BTBD19C9JJ37 291 aa14.51□□□□□ -0.09
VARS2-208ENST00000477052 BCAR3O75815 825 aa14.51□□□□□ -0.09
VARS2-208ENST00000477052 LDHBP07195 334 aaKnown RBP14.51□□□□□ -0.09
VARS2-208ENST00000477052 IL15P40933 162 aaPredicted RBP14.51□□□□□ -0.09
VARS2-208ENST00000477052 TFCP2Q12800 502 aa14.51□□□□□ -0.09
VARS2-208ENST00000477052 CCDC102BQ68D86 513 aa14.51□□□□□ -0.09
VARS2-208ENST00000477052 FRAT1Q92837 279 aaPredicted RBP14.51□□□□□ -0.09
VARS2-208ENST00000477052 ARHGAP39Q9C0H5 1083 aa14.51□□□□□ -0.09
VARS2-208ENST00000477052 FAM198AQ9UFP1 575 aa14.51□□□□□ -0.09
VARS2-208ENST00000477052 SRGAP3O43295 1099 aa14.5□□□□□ -0.09
VARS2-208ENST00000477052 MYCP01106 439 aaPredicted RBP14.5□□□□□ -0.09
VARS2-208ENST00000477052 CT47B1P0C2W7 299 aaPredicted RBP14.5□□□□□ -0.09
VARS2-208ENST00000477052 FKBP1CQ5VVH2 108 aa14.5□□□□□ -0.09
VARS2-208ENST00000477052 ERO1BQ86YB8 467 aa14.5□□□□□ -0.09
VARS2-208ENST00000477052 FAM151AQ8WW52 585 aa14.5□□□□□ -0.09
VARS2-208ENST00000477052 CLUAP1Q96AJ1 413 aa14.5□□□□□ -0.09
VARS2-208ENST00000477052 ZNF341Q9BYN7 854 aa14.5□□□□□ -0.09
VARS2-208ENST00000477052 ZFYVE28Q9HCC9 887 aa14.5□□□□□ -0.09
VARS2-208ENST00000477052 GNL3LQ9NVN8 582 aaKnown RBP14.5□□□□□ -0.09
VARS2-208ENST00000477052 AK9Q5TCS8 1911 aa14.5□□□□□ -0.09
VARS2-208ENST00000477052 CCER2I3L3R5 266 aa14.49□□□□□ -0.09
VARS2-208ENST00000477052 SLC34A2O95436 690 aa14.49□□□□□ -0.09
VARS2-208ENST00000477052 RASGRF1Q13972 1273 aa14.49□□□□□ -0.09
VARS2-208ENST00000477052 DCAF15Q66K64 600 aa14.49□□□□□ -0.09
VARS2-208ENST00000477052 INTS3Q68E01 1043 aaKnown RBP14.49□□□□□ -0.09
VARS2-208ENST00000477052 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.49□□□□□ -0.09
VARS2-208ENST00000477052 COPRSQ9NQ92 184 aa14.49□□□□□ -0.09
VARS2-208ENST00000477052 ABCF2Q9UG63 623 aa14.49□□□□□ -0.09
VARS2-208ENST00000477052 DENND2AQ9ULE3 1009 aa14.49□□□□□ -0.09
VARS2-208ENST00000477052 CENPFP49454 3210 aa14.49□□□□□ -0.09
VARS2-208ENST00000477052 CETPP11597 493 aa14.48□□□□□ -0.09
VARS2-208ENST00000477052 TRIM27P14373 513 aa14.48□□□□□ -0.09
VARS2-208ENST00000477052 SNAPC2Q13487 334 aa14.48□□□□□ -0.09
VARS2-208ENST00000477052 PI16Q6UXB8 463 aa14.48□□□□□ -0.09
VARS2-208ENST00000477052 XAGE2Q96GT9 111 aa14.48□□□□□ -0.09
VARS2-208ENST00000477052 FBXO3Q9UK99 471 aa14.48□□□□□ -0.09
VARS2-208ENST00000477052 PTCH2Q9Y6C5 1203 aa14.48□□□□□ -0.09
VARS2-208ENST00000477052 PNMA6EA0A0J9YXQ4 647 aa14.47□□□□□ -0.09
VARS2-208ENST00000477052 A0A1B0GUL7 405 aa14.47□□□□□ -0.09
VARS2-208ENST00000477052 EN2P19622 333 aaPredicted RBP14.47□□□□□ -0.09
VARS2-208ENST00000477052 RGS3P49796 1198 aa14.47□□□□□ -0.09
VARS2-208ENST00000477052 PPIL2Q13356 520 aa14.47□□□□□ -0.09
VARS2-208ENST00000477052 SH3BP5LQ7L8J4 393 aa14.47□□□□□ -0.09
VARS2-208ENST00000477052 NEUROD6Q96NK8 337 aa14.47□□□□□ -0.09
VARS2-208ENST00000477052 RPAP1Q9BWH6 1393 aaPredicted RBP14.47□□□□□ -0.09
VARS2-208ENST00000477052 SALL1Q9NSC2 1324 aa14.46□□□□□ -0.09
VARS2-208ENST00000477052 GNAI3P08754 354 aa14.46□□□□□ -0.09
VARS2-208ENST00000477052 PICALMQ13492 652 aa14.46□□□□□ -0.09
VARS2-208ENST00000477052 TBC1D9Q6ZT07 1266 aa14.46□□□□□ -0.09
VARS2-208ENST00000477052 DZIP1Q86YF9 867 aaKnown RBP14.46□□□□□ -0.09
VARS2-208ENST00000477052 ARHGAP45Q92619 1136 aa14.46□□□□□ -0.09
VARS2-208ENST00000477052 HOOK2Q96ED9 719 aa14.46□□□□□ -0.09
VARS2-208ENST00000477052 DDX4Q9NQI0 724 aaKnown RBP14.46□□□□□ -0.09
VARS2-208ENST00000477052 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.46□□□□□ -0.09
VARS2-208ENST00000477052 CPA4Q9UI42 421 aa14.46□□□□□ -0.09
VARS2-208ENST00000477052 ZNF112Q9UJU3 913 aa14.46□□□□□ -0.09
VARS2-208ENST00000477052 MYH2Q9UKX2 1941 aa14.46□□□□□ -0.09
VARS2-208ENST00000477052 SEMA3EO15041 775 aa14.45□□□□□ -0.1
VARS2-208ENST00000477052 TLR2O60603 784 aa14.45□□□□□ -0.1
VARS2-208ENST00000477052 CTGFP29279 349 aa14.45□□□□□ -0.1
VARS2-208ENST00000477052 PPATQ06203 517 aa14.45□□□□□ -0.1
VARS2-208ENST00000477052 MOGSQ13724 837 aa14.45□□□□□ -0.1
VARS2-208ENST00000477052 CCDC84Q86UT8 332 aaPredicted RBP14.45□□□□□ -0.1
VARS2-208ENST00000477052 ZSCAN29Q8IWY8 852 aaPredicted RBP14.45□□□□□ -0.1
VARS2-208ENST00000477052 SH3TC2Q8TF17 1288 aa14.45□□□□□ -0.1
VARS2-208ENST00000477052 ZNF384Q8TF68 577 aa14.45□□□□□ -0.1
VARS2-208ENST00000477052 HDAC5Q9UQL6 1122 aa14.45□□□□□ -0.1
VARS2-208ENST00000477052 DDTLA6NHG4 134 aaPredicted RBP14.44□□□□□ -0.1
VARS2-208ENST00000477052 PDHXO00330 501 aa14.44□□□□□ -0.1
VARS2-208ENST00000477052 BTDP43251 543 aa14.44□□□□□ -0.1
VARS2-208ENST00000477052 MECOMQ03112 1051 aa14.44□□□□□ -0.1
VARS2-208ENST00000477052 PRPF38BQ5VTL8 546 aaKnown RBP14.44□□□□□ -0.1
VARS2-208ENST00000477052 ATF7IPQ6VMQ6 1270 aa14.44□□□□□ -0.1
VARS2-208ENST00000477052 TMEM57Q8N5G2 664 aa14.44□□□□□ -0.1
VARS2-208ENST00000477052 ARMC5Q96C12 935 aa14.44□□□□□ -0.1
VARS2-208ENST00000477052 HMG20BQ9P0W2 317 aa14.44□□□□□ -0.1
VARS2-208ENST00000477052 KIAA0100Q14667 2235 aaKnown RBP14.43□□□□□ -0.1
VARS2-208ENST00000477052 GAKO14976 1311 aa14.43□□□□□ -0.1
VARS2-208ENST00000477052 MKI67P46013 3256 aaKnown RBP14.43□□□□□ -0.1
VARS2-208ENST00000477052 FAM196BA6NMK8 535 aa14.43□□□□□ -0.1
VARS2-208ENST00000477052 PHF20L1A8MW92 1017 aa14.43□□□□□ -0.1
VARS2-208ENST00000477052 WDHD1O75717 1129 aaPredicted RBP14.43□□□□□ -0.1
VARS2-208ENST00000477052 GNAI2P04899 355 aa14.43□□□□□ -0.1
VARS2-208ENST00000477052 LACTBP83111 547 aaPredicted RBP14.43□□□□□ -0.1
VARS2-208ENST00000477052 MTX1Q13505 466 aa14.43□□□□□ -0.1
VARS2-208ENST00000477052 SLC9C1Q4G0N8 1177 aa14.43□□□□□ -0.1
VARS2-208ENST00000477052 GORABQ5T7V8 394 aa14.43□□□□□ -0.1
VARS2-208ENST00000477052 ZNF333Q96JL9 665 aa14.43□□□□□ -0.1
VARS2-208ENST00000477052 C1orf115Q9H7X2 142 aa14.43□□□□□ -0.1
VARS2-208ENST00000477052 AKAP2Q9Y2D5 859 aa14.43□□□□□ -0.1
VARS2-208ENST00000477052 BRCA2P51587 3418 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms