RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 SLC39A6Q13433 755 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 TEX35Q5T0J7 233 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 FAM177A1Q8N128 213 aaPredicted RBP5.25□□□□□ -1.57
CCNL1-215ENST00000474539 SPRYD3Q8NCJ5 442 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 ZNF408Q9H9D4 720 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 ABT1Q9ULW3 272 aaKnown RBP5.25□□□□□ -1.57
CCNL1-215ENST00000474539 CNPY2Q9Y2B0 182 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 TRPM1Q7Z4N2 1603 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 TLR3O15455 904 aaKnown RBP5.25□□□□□ -1.57
CCNL1-215ENST00000474539 ALDH1A1P00352 501 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 NFKBIAP25963 317 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 CRKLP46109 303 aaKnown RBP5.25□□□□□ -1.57
CCNL1-215ENST00000474539 STRN3Q13033 797 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 TFDP1Q14186 410 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 HSP90B2PQ58FF3 399 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 GPATCH4Q5T3I0 446 aaKnown RBP5.25□□□□□ -1.57
CCNL1-215ENST00000474539 NUTM1Q86Y26 1132 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 SLC10A4Q96EP9 437 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 ZNF341Q9BYN7 854 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 EXOC1Q9NV70 894 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 DIP2CQ9Y2E4 1556 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 USP17L3A6NCW0 530 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 USP17L4A6NCW7 530 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 GOLGA6L10A6NI86 522 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 BACH1O14867 736 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 FAM13AO94988 1023 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 KRT2P35908 639 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 CLUL1Q15846 466 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 USP17L1Q7RTZ2 530 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 CCDC91Q7Z6B0 441 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 GOLGA5Q8TBA6 731 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 TESK2Q96S53 571 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 NRBP2Q9NSY0 501 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 KDM3AQ9Y4C1 1321 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 C1orf167Q5SNV9 1468 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 CAMSAP1Q5T5Y3 1602 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 KMT5BQ4FZB7 885 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 PRPF40BQ6NWY9 871 aaKnown RBP5.25□□□□□ -1.57
CCNL1-215ENST00000474539 CACNA2D4Q7Z3S7 1137 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 TEX2Q8IWB9 1127 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 CCDC65Q8IXS2 484 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 TRMT44Q8IYL2 757 aaKnown RBP5.25□□□□□ -1.57
CCNL1-215ENST00000474539 TSNARE1Q96NA8 513 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 BRIP1Q9BX63 1249 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 GBP3Q9H0R5 595 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 TSPY26PQ9H489 355 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 MIS18AQ9NYP9 233 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 HEG1Q9ULI3 1381 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 SPATA31E1Q6ZUB1 1445 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 MED14O60244 1454 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 EIF4A1P60842 406 aaKnown RBP5.24□□□□□ -1.57
CCNL1-215ENST00000474539 TGFB2P61812 414 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 CDC42EP1Q00587 391 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 PPP2R5AQ15172 486 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 CCDC14Q49A88 953 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 STYK1Q6J9G0 422 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 ZBTB8OSQ8IWT0 167 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 RETREG2Q8NC44 543 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 LLPHQ9BRT6 129 aaKnown RBP5.24□□□□□ -1.57
CCNL1-215ENST00000474539 NUP62CLQ9H1M0 184 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 TTF2Q9UNY4 1162 aaKnown RBP5.24□□□□□ -1.57
CCNL1-215ENST00000474539 METP08581 1390 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 CROCC2H7BZ55 1655 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 ZNF804BA4D1E1 1349 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 ATP8B3O60423 1300 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 F8W031 263 aaPredicted RBP5.24□□□□□ -1.57
CCNL1-215ENST00000474539 F8W8V4 182 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 GIGYF1O75420 1035 aaPredicted RBP5.24□□□□□ -1.57
CCNL1-215ENST00000474539 ERLIN1O75477 346 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 TUBB4AP04350 444 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 SLC1A4P43007 532 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 TUBB4BP68371 445 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 CCDC40Q4G0X9 1142 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 LMBR1Q8WVP7 490 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 USP40Q9NVE5 1235 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 PPP2R3BQ9Y5P8 575 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 ABCC12Q96J65 1359 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 HMGB3O15347 200 aaKnown RBP5.24□□□□□ -1.57
CCNL1-215ENST00000474539 YEATS4O95619 227 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 GAS8O95995 478 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 SRGAP2BP0DMP2 458 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 MFSD14CQ5VZR4 134 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 TTLL5Q6EMB2 1281 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 KCNV1Q6PIU1 500 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 MAGEB6Q8N7X4 407 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 ADPGKQ9BRR6 497 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 NT5C3AQ9H0P0 336 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 ZNF215Q9UL58 517 aaPredicted RBP5.24□□□□□ -1.57
CCNL1-215ENST00000474539 SETD1BQ9UPS6 1966 aaKnown RBP5.24□□□□□ -1.57
CCNL1-215ENST00000474539 ROBO2Q9HCK4 1378 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.24□□□□□ -1.57
CCNL1-215ENST00000474539 TRIM75PA6NK02 468 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 ZSCAN12O43309 604 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 ZNF189O75820 626 aaPredicted RBP5.24□□□□□ -1.57
CCNL1-215ENST00000474539 DEXIO95424 95 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 CA8P35219 290 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 TKFCQ3LXA3 575 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 MFSD14BQ5SR56 506 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 TTC22Q5TAA0 569 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 RBM46Q8TBY0 533 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms