RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 MICU3Q86XE3 530 aa5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 BICD2Q8TD16 824 aa5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 LEO1Q8WVC0 666 aaPredicted RBP5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 NACAP1Q9BZK3 213 aa5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 FTOQ9C0B1 505 aaKnown RBP eCLIP5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 ZSWIM5Q9P217 1185 aa5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 ANKIB1Q9P2G1 1089 aa5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 ORC3Q9UBD5 711 aaPredicted RBP5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 TRPC5Q9UL62 973 aaPredicted RBP5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 COL5A3P25940 1745 aaPredicted RBP5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 MAGEB6P1A0A0J9YX57 407 aa5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 IFIT3O14879 490 aaKnown RBP5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 DHX16O60231 1041 aaKnown RBP5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 TRIM37O94972 964 aa5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 POLR3DP05423 398 aaPredicted RBP5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 FDPSP14324 419 aaKnown RBP5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 DYNLL1P63167 89 aaKnown RBP5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 TMEM67Q5HYA8 995 aa5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 ZSCAN16Q9H4T2 348 aaPredicted RBP5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 ANGEL1Q9UNK9 670 aaKnown RBP5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 HPS5Q9UPZ3 1129 aa5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 BTAF1O14981 1849 aa5.7□□□□□ -1.5
TM4SF1-202ENST00000472441 SMIM22K7EJ46 135 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 HIBADHP31937 336 aaKnown RBP5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 METAP2P50579 478 aaKnown RBP eCLIP5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 CCDC173Q0VFZ6 552 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 NFIXQ14938 502 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 AKNAD1Q5T1N1 836 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 NAA16Q6N069 864 aaPredicted RBP5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 CCDC82Q8N4S0 544 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 C8orf76Q96K31 380 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 RRAGDQ9NQL2 400 aaPredicted RBP5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 CFAP45Q9UL16 551 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 CARMIL3Q8ND23 1372 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 CCDC69A6NI79 296 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 LETM1O95202 739 aaPredicted RBP5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 ZNF772Q68DY9 489 aaPredicted RBP5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 TXNRD3Q86VQ6 643 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 CKAP2LQ8IYA6 745 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 CNBD1Q8NA66 436 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 PHKBQ93100 1093 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 AIFM3Q96NN9 605 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 DACT1Q9NYF0 836 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 TACC3Q9Y6A5 838 aa5.69□□□□□ -1.5
TM4SF1-202ENST00000472441 LAMA3Q16787 3333 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 CYP2D7A0A087X1C5 515 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 SH2B2O14492 632 aaPredicted RBP5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 ZBTB43O43298 467 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 GNAT2P19087 354 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 ALX1Q15699 326 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 SYNE3Q6ZMZ3 975 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 FAM43AQ8N2R8 423 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 IGDCC4Q8TDY8 1250 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 PGBD1Q96JS3 809 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 GPR101Q96P66 508 aaPredicted RBP5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 BCL11BQ9C0K0 894 aaPredicted RBP5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 ANKRD2Q9GZV1 360 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 ZNF804BA4D1E1 1349 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 TAF1LQ8IZX4 1826 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 ERICH2A1L162 156 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 GOLGA8AA7E2F4 631 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 PRDM1O75626 825 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 PRDX5P30044 214 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 CDC27P30260 824 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 TM4SF1P30408 202 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 EVCP57679 992 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 APOA5Q6Q788 366 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 FBXO33Q7Z6M2 555 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 FBXL16Q8N461 479 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 MPNDQ8N594 471 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 NUP133Q8WUM0 1156 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 TMEM87BQ96K49 555 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 USP28Q96RU2 1077 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 KRT23Q9C075 422 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 NUP62CLQ9H1M0 184 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 AATFQ9NY61 560 aaKnown RBP eCLIP5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 SLC12A7Q9Y666 1083 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 LRP5O75197 1615 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 SALL1Q9NSC2 1324 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 NR1I2O75469 434 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 ME1P48163 572 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 PPARAQ07869 468 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 GNL2Q13823 731 aaKnown RBP5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 CPLX2Q6PUV4 134 aaKnown RBP5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 CMTR1Q8N1G2 835 aaKnown RBP5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 RPGRQ92834 1020 aaKnown RBP5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 ZNF396Q96N95 335 aaPredicted RBP5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 ALG1Q9BT22 464 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 TNMDQ9H2S6 317 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 CNNM2Q9H8M5 875 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 LY9Q9HBG7 655 aa5.68□□□□□ -1.5
TM4SF1-202ENST00000472441 BCORQ6W2J9 1755 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 ELP1O95163 1332 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 PNPLA7Q6ZV29 1317 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 UBE2Q2LH0YL09 131 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 RANBP6O60518 1105 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 IARSP41252 1262 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 MECOMQ03112 1051 aa5.67□□□□□ -1.5
TM4SF1-202ENST00000472441 WTAPQ15007 396 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms