RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 NEDD4P46934 1319 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 CAMTA2O94983 1202 aa11□□□□□ -0.65
TOP3A-203ENST00000469739 ZFYP08048 801 aaPredicted RBP11□□□□□ -0.65
TOP3A-203ENST00000469739 KLRK1P26718 216 aa11□□□□□ -0.65
TOP3A-203ENST00000469739 EVX2Q03828 476 aa11□□□□□ -0.65
TOP3A-203ENST00000469739 PLA2G12BQ9BX93 195 aa11□□□□□ -0.65
TOP3A-203ENST00000469739 CLIC4Q9Y696 253 aa11□□□□□ -0.65
TOP3A-203ENST00000469739 CARMIL3Q8ND23 1372 aa11□□□□□ -0.65
TOP3A-203ENST00000469739 MB21D2Q8IYB1 491 aaPredicted RBP11□□□□□ -0.65
TOP3A-203ENST00000469739 FSIP1Q8NA03 581 aa11□□□□□ -0.65
TOP3A-203ENST00000469739 SMARCC2Q8TAQ2 1214 aa11□□□□□ -0.65
TOP3A-203ENST00000469739 HPS5Q9UPZ3 1129 aa11□□□□□ -0.65
TOP3A-203ENST00000469739 MRVI1Q9Y6F6 885 aa11□□□□□ -0.65
TOP3A-203ENST00000469739 SLC4A4Q9Y6R1 1079 aa11□□□□□ -0.65
TOP3A-203ENST00000469739 NWD2Q9ULI1 1742 aa11□□□□□ -0.65
TOP3A-203ENST00000469739 EPB41L4AQ9HCS5 686 aaPredicted RBP11□□□□□ -0.65
TOP3A-203ENST00000469739 KIF28PB7ZC32 967 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 IFIT3O14879 490 aaKnown RBP10.99□□□□□ -0.65
TOP3A-203ENST00000469739 LETM1O95202 739 aaPredicted RBP10.99□□□□□ -0.65
TOP3A-203ENST00000469739 CDC27P30260 824 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 MAP3K12Q12852 859 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 STK38Q15208 465 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 CCDC152Q4G0S7 254 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 TMEM67Q5HYA8 995 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 LINC00116Q8NCU8 138 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 CELF1Q92879 486 aaKnown RBP10.99□□□□□ -0.65
TOP3A-203ENST00000469739 CCDC39Q9UFE4 941 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 MYO5AQ9Y4I1 1855 aaKnown RBP10.99□□□□□ -0.65
TOP3A-203ENST00000469739 CDHR2Q9BYE9 1310 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 NUP98P52948 1817 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 CYP7A1P22680 504 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 METAP2P50579 478 aaKnown RBP eCLIP10.99□□□□□ -0.65
TOP3A-203ENST00000469739 SPECC1Q5M775 1068 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 ADGRA1Q86SQ6 560 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 AMIGO3Q86WK7 504 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 IFNL3Q8IZI9 196 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 FAM177A1Q8N128 213 aaPredicted RBP10.99□□□□□ -0.65
TOP3A-203ENST00000469739 TSC1Q92574 1164 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 STRBPQ96SI9 672 aaKnown RBP10.99□□□□□ -0.65
TOP3A-203ENST00000469739 SDF4Q9BRK5 362 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 TRIM5Q9C035 493 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 CBX8Q9HC52 389 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 NRBP1Q9UHY1 535 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 CFAP45Q9UL16 551 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 TACC3Q9Y6A5 838 aa10.99□□□□□ -0.65
TOP3A-203ENST00000469739 MYH3P11055 1940 aa10.98□□□□□ -0.65
TOP3A-203ENST00000469739 UBAP1LF5GYI3 381 aa10.98□□□□□ -0.65
TOP3A-203ENST00000469739 DYNLL1P63167 89 aaKnown RBP10.98□□□□□ -0.65
TOP3A-203ENST00000469739 CBX1P83916 185 aa10.98□□□□□ -0.65
TOP3A-203ENST00000469739 GPR101Q96P66 508 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-203ENST00000469739 FUCA2Q9BTY2 467 aa10.98□□□□□ -0.65
TOP3A-203ENST00000469739 ZSWIM5Q9P217 1185 aa10.98□□□□□ -0.65
TOP3A-203ENST00000469739 ZNF165P49910 485 aa10.98□□□□□ -0.65
TOP3A-203ENST00000469739 HMGN5P82970 282 aaKnown RBP10.98□□□□□ -0.65
TOP3A-203ENST00000469739 SLC26A6Q9BXS9 759 aa10.98□□□□□ -0.65
TOP3A-203ENST00000469739 ALDH8A1Q9H2A2 487 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-203ENST00000469739 ERVV-1B6SEH8 477 aa10.98□□□□□ -0.65
TOP3A-203ENST00000469739 GNPATO15228 680 aa10.98□□□□□ -0.65
TOP3A-203ENST00000469739 TBC1D9BQ66K14 1250 aa10.98□□□□□ -0.65
TOP3A-203ENST00000469739 CCDC73Q6ZRK6 1079 aa10.98□□□□□ -0.65
TOP3A-203ENST00000469739 ALG1Q9BT22 464 aa10.98□□□□□ -0.65
TOP3A-203ENST00000469739 ZSCAN25Q6NSZ9 544 aa10.97□□□□□ -0.65
TOP3A-203ENST00000469739 ZNF274Q96GC6 653 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-203ENST00000469739 ANGEL1Q9UNK9 670 aaKnown RBP10.97□□□□□ -0.65
TOP3A-203ENST00000469739 KCNJ14Q9UNX9 436 aa10.97□□□□□ -0.65
TOP3A-203ENST00000469739 NTSR2O95665 410 aa10.97□□□□□ -0.65
TOP3A-203ENST00000469739 LRMPQ12912 555 aa10.97□□□□□ -0.65
TOP3A-203ENST00000469739 TTF1Q15361 905 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-203ENST00000469739 PTPN21Q16825 1174 aa10.97□□□□□ -0.65
TOP3A-203ENST00000469739 SYNE3Q6ZMZ3 975 aa10.97□□□□□ -0.65
TOP3A-203ENST00000469739 C11orf57Q6ZUT1 292 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-203ENST00000469739 ZSCAN16Q9H4T2 348 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-203ENST00000469739 PCDHA7Q9UN72 937 aa10.97□□□□□ -0.65
TOP3A-203ENST00000469739 TAF1P21675 1872 aa10.97□□□□□ -0.65
TOP3A-203ENST00000469739 GOLGA8AA7E2F4 631 aa10.96□□□□□ -0.65
TOP3A-203ENST00000469739 KINO60870 393 aaKnown RBP10.96□□□□□ -0.65
TOP3A-203ENST00000469739 UQCRFS1P1P0C7P4 283 aa10.96□□□□□ -0.65
TOP3A-203ENST00000469739 PTGS1P23219 599 aa10.96□□□□□ -0.65
TOP3A-203ENST00000469739 GUCY1A2P33402 732 aa10.96□□□□□ -0.65
TOP3A-203ENST00000469739 CLSTN2Q9H4D0 955 aa10.96□□□□□ -0.65
TOP3A-203ENST00000469739 TMEM51Q9NW97 253 aa10.96□□□□□ -0.65
TOP3A-203ENST00000469739 KIF3AQ9Y496 699 aa10.96□□□□□ -0.65
TOP3A-203ENST00000469739 ZBTB43O43298 467 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 FGFR2P21802 821 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 HSP90AA4PQ58FG1 418 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 ANKRD18AQ8IVF6 992 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 FAM200AQ8TCP9 573 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.96□□□□□ -0.66
TOP3A-203ENST00000469739 MROH5Q6ZUA9 1318 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 RFX7Q2KHR2 1363 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 SLIT2O94813 1529 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 RREB1Q92766 1687 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 TCRBV5S4A2TA0A5A2 114 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 GSG1L2A8MUP6 293 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 SOCS7O14512 581 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 NDUFA8P51970 172 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 APOA5Q6Q788 366 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 MFSD6Q6ZSS7 791 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 CERS3Q8IU89 383 aa10.96□□□□□ -0.66
TOP3A-203ENST00000469739 IPO4Q8TEX9 1081 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms