RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 ICA1Q05084 483 aa9.91□□□□□ -0.82
HCG18-238ENST00000449544 SPP2Q13103 211 aa9.91□□□□□ -0.82
HCG18-238ENST00000449544 SKIV2LQ15477 1246 aaKnown RBP9.91□□□□□ -0.82
HCG18-238ENST00000449544 TAF1DQ9H5J8 278 aaPredicted RBP9.91□□□□□ -0.82
HCG18-238ENST00000449544 H7C1W4 665 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 CCDC129Q6ZRS4 1044 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 CHD1LQ86WJ1 897 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 PSMD1Q99460 953 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 PARK7Q99497 189 aaKnown RBP9.9□□□□□ -0.82
HCG18-238ENST00000449544 NR2E3Q9Y5X4 410 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 SLC12A7Q9Y666 1083 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 RGMBQ6NW40 437 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 PRDM1O75626 825 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 GDF11O95390 407 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 TFRCP02786 760 aaKnown RBP9.9□□□□□ -0.82
HCG18-238ENST00000449544 KRT32Q14532 448 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 TSHZ3Q63HK5 1081 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 CYP4F22Q6NT55 531 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 BLOC1S2Q6QNY1 142 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 SPRYD3Q8NCJ5 442 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 AP5M1Q9H0R1 490 aa9.9□□□□□ -0.82
HCG18-238ENST00000449544 ZHX1Q9UKY1 873 aaPredicted RBP9.9□□□□□ -0.82
HCG18-238ENST00000449544 NOP56O00567 594 aaKnown RBP9.9□□□□□ -0.83
HCG18-238ENST00000449544 HSPA6P17066 643 aa9.9□□□□□ -0.83
HCG18-238ENST00000449544 TMEM67Q5HYA8 995 aa9.9□□□□□ -0.83
HCG18-238ENST00000449544 CREBRFQ8IUR6 639 aa9.9□□□□□ -0.83
HCG18-238ENST00000449544 CCDC47Q96A33 483 aaKnown RBP9.9□□□□□ -0.83
HCG18-238ENST00000449544 MYO5BQ9ULV0 1848 aa9.89□□□□□ -0.83
HCG18-238ENST00000449544 RNF113AO15541 343 aaKnown RBP9.89□□□□□ -0.83
HCG18-238ENST00000449544 FSTL1Q12841 308 aa9.89□□□□□ -0.83
HCG18-238ENST00000449544 IFIT1BQ5T764 474 aaKnown RBP9.89□□□□□ -0.83
HCG18-238ENST00000449544 USP44Q9H0E7 712 aa9.89□□□□□ -0.83
HCG18-238ENST00000449544 GPCPD1Q9NPB8 672 aa9.89□□□□□ -0.83
HCG18-238ENST00000449544 GPRC5DQ9NZD1 345 aa9.89□□□□□ -0.83
HCG18-238ENST00000449544 CLIP2Q9UDT6 1046 aa9.89□□□□□ -0.83
HCG18-238ENST00000449544 SERPINB13Q9UIV8 391 aa9.89□□□□□ -0.83
HCG18-238ENST00000449544 CDHR2Q9BYE9 1310 aa9.89□□□□□ -0.83
HCG18-238ENST00000449544 MANSC4A6NHS7 340 aaPredicted RBP9.89□□□□□ -0.83
HCG18-238ENST00000449544 TM4SF1P30408 202 aa9.89□□□□□ -0.83
HCG18-238ENST00000449544 SLC9C1Q4G0N8 1177 aa9.89□□□□□ -0.83
HCG18-238ENST00000449544 MFSD14CQ5VZR4 134 aa9.89□□□□□ -0.83
HCG18-238ENST00000449544 DPF2Q92785 391 aa9.89□□□□□ -0.83
HCG18-238ENST00000449544 PRDM5Q9NQX1 630 aaPredicted RBP9.89□□□□□ -0.83
HCG18-238ENST00000449544 FOXP4Q8IVH2 680 aaPredicted RBP9.89□□□□□ -0.83
HCG18-238ENST00000449544 VPS33BQ9H267 617 aa9.89□□□□□ -0.83
HCG18-238ENST00000449544 USP32Q8NFA0 1604 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 ALAS1P13196 640 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 ANKRD44Q8N8A2 993 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 ERO1AQ96HE7 468 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 KRT23Q9C075 422 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 PPLO60437 1756 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 ADM5C9JUS6 153 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 SSBP05455 408 aaKnown RBP eCLIP9.88□□□□□ -0.83
HCG18-238ENST00000449544 SPICE1Q8N0Z3 855 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 SLC4A9Q96Q91 983 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 ITSN1Q15811 1721 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 USP17L12C9JPN9 530 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 USP17L21D6R901 530 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 CA12O43570 354 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 MATR3P43243 847 aaKnown RBP eCLIP9.88□□□□□ -0.831e-6■■■□□ 14.6
HCG18-238ENST00000449544 GTF2A2P52657 109 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 RBM46Q8TBY0 533 aaKnown RBP9.88□□□□□ -0.83
HCG18-238ENST00000449544 CCDC17Q96LX7 622 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 ZHX3Q9H4I2 956 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 GINS2Q9Y248 185 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 SIGLEC1Q9BZZ2 1709 aa9.88□□□□□ -0.83
HCG18-238ENST00000449544 USP17L5A8MUK1 530 aa9.87□□□□□ -0.83
HCG18-238ENST00000449544 CDKL5O76039 1030 aa9.87□□□□□ -0.83
HCG18-238ENST00000449544 GNAQP50148 359 aa9.87□□□□□ -0.83
HCG18-238ENST00000449544 CCDC12Q8WUD4 166 aaPredicted RBP9.87□□□□□ -0.83
HCG18-238ENST00000449544 TNPO1Q92973 898 aaKnown RBP9.87□□□□□ -0.83
HCG18-238ENST00000449544 MXD3Q9BW11 206 aa9.87□□□□□ -0.83
HCG18-238ENST00000449544 YBX3P16989 372 aaKnown RBP eCLIP9.87□□□□□ -0.83
HCG18-238ENST00000449544 CNNM2Q9H8M5 875 aa9.87□□□□□ -0.83
HCG18-238ENST00000449544 CYP46A1Q9Y6A2 500 aa9.87□□□□□ -0.83
HCG18-238ENST00000449544 COL14A1Q05707 1796 aaKnown RBP9.87□□□□□ -0.83
HCG18-238ENST00000449544 ZNF532Q9HCE3 1301 aa9.87□□□□□ -0.83
HCG18-238ENST00000449544 SPDYE3A6NKU9 549 aa9.87□□□□□ -0.83
HCG18-238ENST00000449544 BACH1O14867 736 aa9.87□□□□□ -0.83
HCG18-238ENST00000449544 WTAPQ15007 396 aa9.87□□□□□ -0.83
HCG18-238ENST00000449544 CCDC174Q6PII3 467 aa9.87□□□□□ -0.83
HCG18-238ENST00000449544 FCHSD1Q86WN1 690 aa9.87□□□□□ -0.83
HCG18-238ENST00000449544 ZC3H15Q8WU90 426 aaKnown RBP9.87□□□□□ -0.83
HCG18-238ENST00000449544 PALD1Q9ULE6 856 aa9.87□□□□□ -0.83
HCG18-238ENST00000449544 LPXNO60711 386 aa9.86□□□□□ -0.83
HCG18-238ENST00000449544 IGKV5-2P06315 115 aa9.86□□□□□ -0.83
HCG18-238ENST00000449544 FCGRTP55899 365 aa9.86□□□□□ -0.83
HCG18-238ENST00000449544 STK3Q13188 491 aa9.86□□□□□ -0.83
HCG18-238ENST00000449544 MTIF3Q9H2K0 278 aaKnown RBP9.86□□□□□ -0.83
HCG18-238ENST00000449544 ZNF70Q9UC06 446 aaPredicted RBP9.86□□□□□ -0.83
HCG18-238ENST00000449544 NDUFB9Q9Y6M9 179 aa9.86□□□□□ -0.83
HCG18-238ENST00000449544 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.86□□□□□ -0.83
HCG18-238ENST00000449544 SLC10A5Q5PT55 438 aa9.86□□□□□ -0.83
HCG18-238ENST00000449544 SPOUT1Q5T280 376 aaKnown RBP9.86□□□□□ -0.83
HCG18-238ENST00000449544 ANP32BQ92688 251 aaKnown RBP9.86□□□□□ -0.83
HCG18-238ENST00000449544 CHD2O14647 1828 aaKnown RBP9.86□□□□□ -0.83
HCG18-238ENST00000449544 STRCQ7RTU9 1775 aa9.86□□□□□ -0.83
HCG18-238ENST00000449544 MYCLP12524 364 aaPredicted RBP9.86□□□□□ -0.83
HCG18-238ENST00000449544 ADORA1P30542 326 aa9.86□□□□□ -0.83
HCG18-238ENST00000449544 INHBEP58166 350 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms