RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 MOGSQ13724 837 aa16.17■□□□□ 0.18
AC004540.1-204ENST00000449537 MAP3K2Q9Y2U5 619 aa16.17■□□□□ 0.18
AC004540.1-204ENST00000449537 MYH3P11055 1940 aa16.17■□□□□ 0.18
AC004540.1-204ENST00000449537 IGKV5-2P06315 115 aa16.16■□□□□ 0.18
AC004540.1-204ENST00000449537 ZNF341Q9BYN7 854 aa16.16■□□□□ 0.18
AC004540.1-204ENST00000449537 H7C1W4 665 aa16.15■□□□□ 0.18
AC004540.1-204ENST00000449537 INPP5BP32019 993 aa16.15■□□□□ 0.18
AC004540.1-204ENST00000449537 CACNB3P54284 484 aa16.15■□□□□ 0.18
AC004540.1-204ENST00000449537 GPAT2Q6NUI2 795 aa16.15■□□□□ 0.18
AC004540.1-204ENST00000449537 MIGA2Q7L4E1 593 aa16.15■□□□□ 0.18
AC004540.1-204ENST00000449537 UBE3BQ7Z3V4 1068 aa16.15■□□□□ 0.18
AC004540.1-204ENST00000449537 COA7Q96BR5 231 aa16.15■□□□□ 0.18
AC004540.1-204ENST00000449537 SEMA6BQ9H3T3 888 aa16.15■□□□□ 0.18
AC004540.1-204ENST00000449537 SPTBN5Q9NRC6 3674 aaKnown RBP16.15■□□□□ 0.18
AC004540.1-204ENST00000449537 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
AC004540.1-204ENST00000449537 NEXNQ0ZGT2 675 aa16.14■□□□□ 0.17
AC004540.1-204ENST00000449537 FAM83AQ86UY5 434 aa16.14■□□□□ 0.17
AC004540.1-204ENST00000449537 HMX1Q9NP08 348 aaPredicted RBP16.14■□□□□ 0.17
AC004540.1-204ENST00000449537 TMOD2Q9NZR1 351 aa16.14■□□□□ 0.17
AC004540.1-204ENST00000449537 ANKRD18BA2A2Z9 1011 aa16.13■□□□□ 0.17
AC004540.1-204ENST00000449537 CXCL11O14625 94 aa16.13■□□□□ 0.17
AC004540.1-204ENST00000449537 CSF1RP07333 972 aa16.13■□□□□ 0.17
AC004540.1-204ENST00000449537 KSR2Q6VAB6 950 aa16.13■□□□□ 0.17
AC004540.1-204ENST00000449537 TDRD7Q8NHU6 1098 aaKnown RBP16.13■□□□□ 0.17
AC004540.1-204ENST00000449537 PLA2G12BQ9BX93 195 aa16.13■□□□□ 0.17
AC004540.1-204ENST00000449537 ELL2O00472 640 aaPredicted RBP16.12■□□□□ 0.17
AC004540.1-204ENST00000449537 HMGCRP04035 888 aa16.12■□□□□ 0.17
AC004540.1-204ENST00000449537 HOXD11P31277 338 aaPredicted RBP16.12■□□□□ 0.17
AC004540.1-204ENST00000449537 CWF19L2Q2TBE0 894 aaKnown RBP16.12■□□□□ 0.17
AC004540.1-204ENST00000449537 TJAP1Q5JTD0 557 aa16.12■□□□□ 0.17
AC004540.1-204ENST00000449537 FASTKD5Q7L8L6 764 aaKnown RBP16.12■□□□□ 0.17
AC004540.1-204ENST00000449537 LBHD1Q9BQE6 289 aaPredicted RBP16.12■□□□□ 0.17
AC004540.1-204ENST00000449537 OGDHLQ9ULD0 1010 aa16.12■□□□□ 0.17
AC004540.1-204ENST00000449537 DOCK3Q8IZD9 2030 aa16.11■□□□□ 0.17
AC004540.1-204ENST00000449537 TMEM265A0A087WTH1 108 aa16.11■□□□□ 0.17
AC004540.1-204ENST00000449537 PI4KAP2A4QPH2 592 aa16.11■□□□□ 0.17
AC004540.1-204ENST00000449537 HDLBPQ00341 1268 aaKnown RBP16.11■□□□□ 0.17
AC004540.1-204ENST00000449537 FKBP1CQ5VVH2 108 aa16.11■□□□□ 0.17
AC004540.1-204ENST00000449537 PI4KAP1Q8N8J0 262 aa16.11■□□□□ 0.17
AC004540.1-204ENST00000449537 MYLIPQ8WY64 445 aa16.11■□□□□ 0.17
AC004540.1-204ENST00000449537 ZNF112Q9UJU3 913 aa16.11■□□□□ 0.17
AC004540.1-204ENST00000449537 TRIM35Q9UPQ4 493 aa16.11■□□□□ 0.17
AC004540.1-204ENST00000449537 PRUNE2Q8WUY3 3088 aa16.11■□□□□ 0.17
AC004540.1-204ENST00000449537 EYSQ5T1H1 3165 aa16.1■□□□□ 0.17
AC004540.1-204ENST00000449537 NEURL1BA8MQ27 555 aa16.1■□□□□ 0.17
AC004540.1-204ENST00000449537 PLIN1O60240 522 aa16.1■□□□□ 0.17
AC004540.1-204ENST00000449537 SMCR8Q8TEV9 937 aaPredicted RBP16.1■□□□□ 0.17
AC004540.1-204ENST00000449537 MBIPQ9NS73 344 aa16.1■□□□□ 0.17
AC004540.1-204ENST00000449537 COL2A1P02458 1487 aaPredicted RBP16.1■□□□□ 0.17
AC004540.1-204ENST00000449537 HIBADHP31937 336 aaKnown RBP16.09■□□□□ 0.17
AC004540.1-204ENST00000449537 TEKT1Q969V4 418 aa16.09■□□□□ 0.17
AC004540.1-204ENST00000449537 CHMP4AQ9BY43 222 aa16.09■□□□□ 0.17
AC004540.1-204ENST00000449537 PFASO15067 1338 aa16.09■□□□□ 0.17
AC004540.1-204ENST00000449537 DDX60LQ5H9U9 1706 aaKnown RBP16.08■□□□□ 0.17
AC004540.1-204ENST00000449537 FOSL2P15408 326 aa16.08■□□□□ 0.16
AC004540.1-204ENST00000449537 MAP3K12Q12852 859 aa16.08■□□□□ 0.16
AC004540.1-204ENST00000449537 IFIT5Q13325 482 aaKnown RBP16.08■□□□□ 0.16
AC004540.1-204ENST00000449537 SLC45A1Q9Y2W3 748 aa16.08■□□□□ 0.16
AC004540.1-204ENST00000449537 GYG1P46976 350 aa16.07■□□□□ 0.16
AC004540.1-204ENST00000449537 TRIM32Q13049 653 aa16.07■□□□□ 0.16
AC004540.1-204ENST00000449537 GRIK5Q16478 980 aa16.07■□□□□ 0.16
AC004540.1-204ENST00000449537 LRRC26Q2I0M4 334 aa16.07■□□□□ 0.16
AC004540.1-204ENST00000449537 NOL9Q5SY16 702 aaKnown RBP16.07■□□□□ 0.16
AC004540.1-204ENST00000449537 CCDC30Q5VVM6 783 aa16.07■□□□□ 0.16
AC004540.1-204ENST00000449537 GADL1Q6ZQY3 521 aa16.07■□□□□ 0.16
AC004540.1-204ENST00000449537 ANKRD13CQ8N6S4 541 aa16.07■□□□□ 0.16
AC004540.1-204ENST00000449537 ZDHHC15Q96MV8 337 aa16.07■□□□□ 0.16
AC004540.1-204ENST00000449537 MRIQ9BWK5 157 aa16.07■□□□□ 0.16
AC004540.1-204ENST00000449537 ZHX2Q9Y6X8 837 aa16.07■□□□□ 0.16
AC004540.1-204ENST00000449537 A0A0G2JLL6 359 aaPredicted RBP16.06■□□□□ 0.16
AC004540.1-204ENST00000449537 COL6A1P12109 1028 aa16.06■□□□□ 0.16
AC004540.1-204ENST00000449537 GCKRQ14397 625 aa16.06■□□□□ 0.16
AC004540.1-204ENST00000449537 PRRT2Q7Z6L0 340 aaPredicted RBP16.06■□□□□ 0.16
AC004540.1-204ENST00000449537 CCDC146Q8IYE0 955 aa16.06■□□□□ 0.16
AC004540.1-204ENST00000449537 FAM84BQ96KN1 310 aaPredicted RBP16.06■□□□□ 0.16
AC004540.1-204ENST00000449537 LAMA2P24043 3122 aaKnown RBP16.06■□□□□ 0.16
AC004540.1-204ENST00000449537 RPAP1Q9BWH6 1393 aaPredicted RBP16.05■□□□□ 0.16
AC004540.1-204ENST00000449537 APOBEC3HQ6NTF7 200 aaKnown RBP16.05■□□□□ 0.16
AC004540.1-204ENST00000449537 FAM151AQ8WW52 585 aa16.05■□□□□ 0.16
AC004540.1-204ENST00000449537 CASP7P55210 303 aa16.04■□□□□ 0.16
AC004540.1-204ENST00000449537 UBE4AQ14139 1066 aa16.04■□□□□ 0.16
AC004540.1-204ENST00000449537 LDHAL6AQ6ZMR3 332 aa16.04■□□□□ 0.16
AC004540.1-204ENST00000449537 TBC1D22AQ8WUA7 517 aa16.04■□□□□ 0.16
AC004540.1-204ENST00000449537 TTYH1Q9H313 450 aaPredicted RBP16.04■□□□□ 0.16
AC004540.1-204ENST00000449537 GJD2Q9UKL4 321 aa16.04■□□□□ 0.16
AC004540.1-204ENST00000449537 CHMP3Q9Y3E7 222 aa16.04■□□□□ 0.16
AC004540.1-204ENST00000449537 CHAF1AQ13111 956 aaPredicted RBP16.03■□□□□ 0.16
AC004540.1-204ENST00000449537 SHHQ15465 462 aa16.03■□□□□ 0.16
AC004540.1-204ENST00000449537 FAM110CQ1W6H9 321 aa16.03■□□□□ 0.16
AC004540.1-204ENST00000449537 PICK1Q9NRD5 415 aa16.03■□□□□ 0.16
AC004540.1-204ENST00000449537 CNNM1Q9NRU3 951 aa16.03■□□□□ 0.16
AC004540.1-204ENST00000449537 PRKAG2Q9UGJ0 569 aa16.03■□□□□ 0.16
AC004540.1-204ENST00000449537 AK9Q5TCS8 1911 aa16.02■□□□□ 0.16
AC004540.1-204ENST00000449537 FRAT2O75474 233 aaPredicted RBP16.02■□□□□ 0.16
AC004540.1-204ENST00000449537 ZNF853P0CG23 659 aa16.02■□□□□ 0.16
AC004540.1-204ENST00000449537 SMAD3P84022 425 aaKnown RBP16.02■□□□□ 0.16
AC004540.1-204ENST00000449537 TCP10Q12799 353 aa16.02■□□□□ 0.16
AC004540.1-204ENST00000449537 VPS37DQ86XT2 251 aa16.02■□□□□ 0.16
AC004540.1-204ENST00000449537 C8orf58Q8NAV2 365 aa16.02■□□□□ 0.16
AC004540.1-204ENST00000449537 MYH16Q9H6N6 1097 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms