RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 EHBP1Q8NDI1 1231 aa7.08□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PPM1HQ9ULR3 514 aa7.08□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 NOL7Q9UMY1 257 aaKnown RBP7.08□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 TLR6Q9Y2C9 796 aa7.08□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 GRIN2BQ13224 1484 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 POTEB2H3BUK9 544 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ASMTLO95671 621 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PF4P02776 101 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 IDH3AP50213 366 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FCGRTP55899 365 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 TRIM32Q13049 653 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 MAPRE1Q15691 268 aaKnown RBP7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FBXW10Q5XX13 1052 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PHC3Q8NDX5 983 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 RHPN1Q8TCX5 695 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 RSPH1Q8WYR4 309 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 OTUD5Q96G74 571 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 LRRC27Q9C0I9 530 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 RBSNQ9H1K0 784 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 EHD4Q9H223 541 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ANAPC4Q9UJX5 808 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 USP20Q9Y2K6 914 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 EREGO14944 169 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PLIN1O60240 522 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FOSP01100 380 aaPredicted RBP7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FGAP02671 866 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CRKP46108 304 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SEPT6Q14141 434 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FXNQ16595 210 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ZSCAN30Q86W11 494 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SLITRK4Q8IW52 837 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 RAVER1Q8IY67 606 aaKnown RBP7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 RUNDC1Q96C34 613 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FHDC1Q9C0D6 1143 aaPredicted RBP7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CASS4Q9NQ75 786 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PGPEP1Q9NXJ5 209 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 AKAP2Q9Y2D5 859 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ADAMTS12P58397 1594 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 KDM2BQ8NHM5 1336 aa7.07□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FGD6Q6ZV73 1430 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 IFT140Q96RY7 1462 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 IQGAP2Q13576 1575 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FBXO24O75426 580 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 GARTP22102 1010 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 TXLNAP40222 546 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CAMK2GQ13555 558 aaPredicted RBP7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 TRIP4Q15650 581 aaPredicted RBP7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 LARP1BQ659C4 914 aaKnown RBP7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SV2BQ7L1I2 683 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 HSCBQ8IWL3 235 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 RTCBQ9Y3I0 505 aaKnown RBP7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CD2APQ9Y5K6 639 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 GIPRP48546 466 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 TDO2P48775 406 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ARSDP51689 593 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CTC1Q2NKJ3 1217 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SEZ6Q53EL9 994 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 TMEM214Q6NUQ4 689 aaKnown RBP7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 GLIS3Q8NEA6 775 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CHAC2Q8WUX2 184 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PPM1EQ8WY54 764 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PMEPA1Q969W9 287 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 NLRP3Q96P20 1036 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FERD3LQ96RJ6 166 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ZSCAN10Q96SZ4 725 aaPredicted RBP7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CWC25Q9NXE8 425 aaPredicted RBP7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PTCH2Q9Y6C5 1203 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 LRRIQ1Q96JM4 1722 aa7.06□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CCDC18Q5T9S5 1454 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SUPT6HQ7KZ85 1726 aaKnown RBP7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ALG1L2C9J202 215 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ALDH1L1O75891 902 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 GNALP38405 381 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 TNNT2P45379 298 aaPredicted RBP7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 LIG3P49916 1009 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 LSM11P83369 360 aaKnown RBP eCLIP7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SKOR1P84550 965 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 LMNB2Q03252 620 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CCDC92Q53HC0 331 aaPredicted RBP7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CT47A1Q5JQC4 288 aaPredicted RBP7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 GJC2Q5T442 439 aaPredicted RBP7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 KIAA0319Q5VV43 1072 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 IER5Q5VY09 327 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 C1orf127Q8N9H9 656 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SVIPQ8NHG7 77 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ANKRD24Q8TF21 1146 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ZNF516Q92618 1163 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FRAT1Q92837 279 aaPredicted RBP7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CHRDQ9H2X0 955 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PNNQ9H307 717 aaKnown RBP7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PFDN2Q9UHV9 154 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 WDR62O43379 1518 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 MAPKBP1O60336 1514 aa7.05□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 DYTNA2CJ06 578 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 IFRD1O00458 451 aaPredicted RBP7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 HIP1RO75146 1068 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CAND2O75155 1236 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 HMMRO75330 724 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 MCM4P33991 863 aa7.04□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PEX19P40855 299 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms