RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 SLC4A10Q6U841 1118 aa7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 PPP1R42Q7Z4L9 355 aa7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 FOXD4L4Q8WXT5 416 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 DNAAF4Q8WXU2 420 aa7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 POM121Q96HA1 1249 aa7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 MYD88Q99836 296 aa7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 METTL22Q9BUU2 404 aaPredicted RBP7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 NIP7Q9Y221 180 aaKnown RBP eCLIP7.73□□□□□ -1.17
ECHDC1-208ENST00000436638 FAM177BA6PVY3 158 aa7.72□□□□□ -1.17
ECHDC1-208ENST00000436638 UPP2O95045 317 aa7.72□□□□□ -1.17
ECHDC1-208ENST00000436638 MMP10P09238 476 aa7.72□□□□□ -1.17
ECHDC1-208ENST00000436638 GPTP24298 496 aa7.72□□□□□ -1.17
ECHDC1-208ENST00000436638 IRF5Q13568 498 aa7.72□□□□□ -1.17
ECHDC1-208ENST00000436638 NFIXQ14938 502 aa7.72□□□□□ -1.17
ECHDC1-208ENST00000436638 TPTE2Q6XPS3 522 aa7.72□□□□□ -1.17
ECHDC1-208ENST00000436638 FTSJ3Q8IY81 847 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-208ENST00000436638 ARHGAP45Q92619 1136 aa7.72□□□□□ -1.17
ECHDC1-208ENST00000436638 PURBQ96QR8 312 aaKnown RBP7.72□□□□□ -1.17
ECHDC1-208ENST00000436638 PDGFDQ9GZP0 370 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-208ENST00000436638 NYXQ9GZU5 481 aa7.72□□□□□ -1.17
ECHDC1-208ENST00000436638 PPP1R1BQ9UD71 204 aaPredicted RBP7.72□□□□□ -1.17
ECHDC1-208ENST00000436638 TUBGCP6Q96RT7 1819 aa7.71□□□□□ -1.17
ECHDC1-208ENST00000436638 F6X3S4 739 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 ATP5J2-PTCD1G3V325 749 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 ERVH48-1M5A8F1 160 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 MAFGO15525 162 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 SERPINB2P05120 415 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 SNRPBP14678 240 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 TM4SF1P30408 202 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 MCCD1P59942 119 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 ANAPC15P60006 121 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 ST5P78524 1137 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 VAC14Q08AM6 782 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 CBLBQ13191 982 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 C6orf118Q5T5N4 469 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 ATF7IPQ6VMQ6 1270 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 NBPF5PQ86XG9 351 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 KIFC2Q96AC6 838 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 TRIM47Q96LD4 638 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 ZFP42Q96MM3 310 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 UTP14AQ9BVJ6 771 aaKnown RBP7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 SRCIN1Q9C0H9 1055 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 TMPRSS4Q9NRS4 437 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 CWC25Q9NXE8 425 aaPredicted RBP7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 CACNA1FO60840 1977 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 CARMIL3Q8ND23 1372 aa7.71□□□□□ -1.18
ECHDC1-208ENST00000436638 ATP10DQ9P241 1426 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 C4AP0C0L4 1744 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 ESPNB1AK53 854 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 ALDH1L1O75891 902 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 BMP2P12643 396 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 CCT4P50991 539 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 TMCO4Q5TGY1 634 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 SUSD4Q5VX71 490 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 DZIP1LQ8IYY4 767 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 ZNF34Q8IZ26 560 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 CNBD1Q8NA66 436 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 CCDC191Q8NCU4 936 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 LINS1Q8NG48 757 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 CLUAP1Q96AJ1 413 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 ISCA1Q9BUE6 129 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 TRMT112Q9UI30 125 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 HDAC5Q9UQL6 1122 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 COG6Q9Y2V7 657 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 ADCY9O60503 1353 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 SCN7AQ01118 1682 aa7.7□□□□□ -1.18
ECHDC1-208ENST00000436638 NEURL1BA8MQ27 555 aa7.69□□□□□ -1.18
ECHDC1-208ENST00000436638 POLRMTO00411 1230 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-208ENST00000436638 TRIM28Q13263 835 aaKnown RBP7.69□□□□□ -1.18
ECHDC1-208ENST00000436638 BEND3Q5T5X7 828 aa7.69□□□□□ -1.18
ECHDC1-208ENST00000436638 RNF20Q5VTR2 975 aa7.69□□□□□ -1.18
ECHDC1-208ENST00000436638 NLRP10Q86W26 655 aa7.69□□□□□ -1.18
ECHDC1-208ENST00000436638 MEIOBQ8N635 442 aa7.69□□□□□ -1.18
ECHDC1-208ENST00000436638 C9orf78Q9NZ63 289 aaPredicted RBP7.69□□□□□ -1.18
ECHDC1-208ENST00000436638 RNF123Q5XPI4 1314 aa7.69□□□□□ -1.18
ECHDC1-208ENST00000436638 SH3TC1Q8TE82 1336 aa7.69□□□□□ -1.18
ECHDC1-208ENST00000436638 BCORQ6W2J9 1755 aa7.69□□□□□ -1.18
ECHDC1-208ENST00000436638 CASZ1Q86V15 1759 aa7.69□□□□□ -1.18
ECHDC1-208ENST00000436638 PLIN1O60240 522 aa7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 PCCAP05165 728 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 IGKV5-2P06315 115 aa7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 TRIM27P14373 513 aa7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 DDR1Q08345 913 aa7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 WASHC4Q2M389 1173 aa7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 CWF19L2Q2TBE0 894 aaKnown RBP7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 ITPRIPQ8IWB1 547 aa7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 LINC00528Q8N1L1 170 aa7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 ZBTB38Q8NAP3 1195 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 ZNF784Q8NCA9 323 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 TSEN34Q9BSV6 310 aaKnown RBP7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 CHMP4BQ9H444 224 aaKnown RBP7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 UBN2Q6ZU65 1347 aa7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 IBTKQ9P2D0 1353 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-208ENST00000436638 ARFGEF2Q9Y6D5 1785 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 NUP98P52948 1817 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 NTSR2O95665 410 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 PDE6BP35913 854 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 RRP1P56182 461 aaKnown RBP7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 GCKRQ14397 625 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 PDE3AQ14432 1141 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms