RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 PNPLA7Q6ZV29 1317 aa12.1□□□□□ -0.47
CD44-210ENST00000434472 GOLGA8AA7E2F4 631 aa12.1□□□□□ -0.47
CD44-210ENST00000434472 GTF2F1P35269 517 aaKnown RBP eCLIP12.1□□□□□ -0.47
CD44-210ENST00000434472 IARSP41252 1262 aaKnown RBP12.1□□□□□ -0.47
CD44-210ENST00000434472 SLC39A14Q15043 492 aa12.1□□□□□ -0.47
CD44-210ENST00000434472 TMEM67Q5HYA8 995 aa12.1□□□□□ -0.47
CD44-210ENST00000434472 OTUD7BQ6GQQ9 843 aa12.1□□□□□ -0.47
CD44-210ENST00000434472 INTS5Q6P9B9 1019 aaKnown RBP12.1□□□□□ -0.47
CD44-210ENST00000434472 IGDCC4Q8TDY8 1250 aa12.1□□□□□ -0.47
CD44-210ENST00000434472 TIGD1Q96MW7 591 aa12.1□□□□□ -0.47
CD44-210ENST00000434472 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
CD44-210ENST00000434472 DOT1LQ8TEK3 1739 aa12.1□□□□□ -0.47
CD44-210ENST00000434472 CICQ96RK0 1608 aaPredicted RBP12.1□□□□□ -0.47
CD44-210ENST00000434472 RREB1Q92766 1687 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 NID2Q14112 1375 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 TIAM2Q8IVF5 1701 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 CCDC69A6NI79 296 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 B4E1Z4 1266 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 PPP6R2O75170 966 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 MBD4O95243 580 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 POLR3DP05423 398 aaPredicted RBP12.09□□□□□ -0.47
CD44-210ENST00000434472 CRKLP46109 303 aaKnown RBP12.09□□□□□ -0.47
CD44-210ENST00000434472 RBM6P78332 1123 aaKnown RBP12.09□□□□□ -0.47
CD44-210ENST00000434472 GNL2Q13823 731 aaKnown RBP12.09□□□□□ -0.47
CD44-210ENST00000434472 RASGRF1Q13972 1273 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 SART3Q15020 963 aaKnown RBP12.09□□□□□ -0.47
CD44-210ENST00000434472 DDB1Q16531 1140 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 AKNAD1Q5T1N1 836 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 TMTC2Q8N394 836 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 MAGEB6Q8N7X4 407 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 SMARCC1Q92922 1105 aaPredicted RBP12.09□□□□□ -0.47
CD44-210ENST00000434472 RNF41Q9H4P4 317 aaPredicted RBP12.09□□□□□ -0.47
CD44-210ENST00000434472 KIAA1468Q9P260 1216 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 ZNF652Q9Y2D9 606 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 DOCK2Q92608 1830 aa12.09□□□□□ -0.47
CD44-210ENST00000434472 A0A1B0GVL5 298 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 SMTNL1A8MU46 457 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 IFIT3O14879 490 aaKnown RBP12.08□□□□□ -0.48
CD44-210ENST00000434472 CAMTA2O94983 1202 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 ATP6V1AP38606 617 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 NDUFA8P51970 172 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 RCAN1P53805 252 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 SSRP1Q08945 709 aaKnown RBP12.08□□□□□ -0.48
CD44-210ENST00000434472 KRT40Q6A162 431 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 HELBQ8NG08 1087 aaPredicted RBP12.08□□□□□ -0.48
CD44-210ENST00000434472 LY9Q9HBG7 655 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 SLC12A7Q9Y666 1083 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 SPATA31A1Q5TZJ5 1347 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 ERICH2A1L162 156 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 KIF28PB7ZC32 967 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 PPFIA3O75145 1194 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 SLC3A2P08195 630 aaKnown RBP12.08□□□□□ -0.48
CD44-210ENST00000434472 NLRP12P59046 1061 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 MFSD6Q6ZSS7 791 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 DHX40Q8IX18 779 aaKnown RBP12.08□□□□□ -0.48
CD44-210ENST00000434472 STAG1Q8WVM7 1258 aa12.08□□□□□ -0.48
CD44-210ENST00000434472 EPB41L4AQ9HCS5 686 aaPredicted RBP12.08□□□□□ -0.48
CD44-210ENST00000434472 GNL3LQ9NVN8 582 aaKnown RBP12.08□□□□□ -0.48
CD44-210ENST00000434472 NEDD4P46934 1319 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 LAMB2P55268 1798 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 LOC102724428A0A0B4J2F2 783 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 FAM237AA0A1B0GTK4 181 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 CCDC196A0A1B0GTZ2 297 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 GSG1L2A8MUP6 293 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 RGL2O15211 777 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 ZNF202O95125 648 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 FMNL1O95466 1100 aaPredicted RBP12.07□□□□□ -0.48
CD44-210ENST00000434472 NTSR2O95665 410 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 IFNAR1P17181 557 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 U2AF2P26368 475 aaKnown RBP eCLIP12.07□□□□□ -0.48
CD44-210ENST00000434472 TDO2P48775 406 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 SIK1P57059 783 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 GSDMDP57764 484 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 SAFBQ15424 915 aaKnown RBP eCLIP12.07□□□□□ -0.48
CD44-210ENST00000434472 AXDND1Q5T1B0 1012 aaPredicted RBP12.07□□□□□ -0.48
CD44-210ENST00000434472 VPS37DQ86XT2 251 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 RAB11FIP4Q86YS3 637 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 C17orf53Q8N3J3 647 aaPredicted RBP12.07□□□□□ -0.48
CD44-210ENST00000434472 ARMT1Q9H993 441 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 IMPACTQ9P2X3 320 aa12.07□□□□□ -0.48
CD44-210ENST00000434472 SLIT2O94813 1529 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 CUTAO60888 179 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 PFKFB1P16118 471 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 CDC27P30260 824 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 PPP2R5BQ15173 497 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 NTRK3Q16288 839 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 CLEC4GQ6UXB4 293 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 MICU3Q86XE3 530 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 TRIM22Q8IYM9 498 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 AOPEPQ8N6M6 819 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 SEC31BQ9NQW1 1179 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 FAM13BQ9NYF5 915 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 ZSWIM5Q9P217 1185 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 NIP7Q9Y221 180 aaKnown RBP eCLIP12.06□□□□□ -0.48
CD44-210ENST00000434472 SLC4A4Q9Y6R1 1079 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 ROBO1Q9Y6N7 1651 aa12.06□□□□□ -0.48
CD44-210ENST00000434472 RBM10P98175 930 aaKnown RBP12.05□□□□□ -0.48
CD44-210ENST00000434472 CTDSPL2Q05D32 466 aa12.05□□□□□ -0.48
CD44-210ENST00000434472 WTAPQ15007 396 aa12.05□□□□□ -0.48
CD44-210ENST00000434472 ELOA2Q8IYF1 753 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms