RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 KRT40Q6A162 431 aa21.49■■□□□ 1.03
CHD1L-204ENST00000431239 NAT10Q9H0A0 1025 aaKnown RBP21.49■■□□□ 1.03
CHD1L-204ENST00000431239 MYH3P11055 1940 aa21.48■■□□□ 1.03
CHD1L-204ENST00000431239 BCL9O00512 1426 aa21.48■■□□□ 1.03
CHD1L-204ENST00000431239 SLC3A2P08195 630 aaKnown RBP21.48■■□□□ 1.03
CHD1L-204ENST00000431239 CDC25BP30305 580 aa21.48■■□□□ 1.03
CHD1L-204ENST00000431239 TMEM67Q5HYA8 995 aa21.48■■□□□ 1.03
CHD1L-204ENST00000431239 ZKSCAN3Q9BRR0 538 aa21.48■■□□□ 1.03
CHD1L-204ENST00000431239 EPB41L4AQ9HCS5 686 aaPredicted RBP21.48■■□□□ 1.03
CHD1L-204ENST00000431239 CCDC82Q8N4S0 544 aa21.48■■□□□ 1.03
CHD1L-204ENST00000431239 SPATA5Q8NB90 893 aa21.48■■□□□ 1.03
CHD1L-204ENST00000431239 STRBPQ96SI9 672 aaKnown RBP21.48■■□□□ 1.03
CHD1L-204ENST00000431239 NAPBQ9H115 298 aa21.48■■□□□ 1.03
CHD1L-204ENST00000431239 TCRBV5S4A2TA0A5A2 114 aa21.47■■□□□ 1.03
CHD1L-204ENST00000431239 CCDC69A6NI79 296 aa21.47■■□□□ 1.03
CHD1L-204ENST00000431239 SKILP12757 684 aa21.47■■□□□ 1.03
CHD1L-204ENST00000431239 AXDND1Q5T1B0 1012 aaPredicted RBP21.47■■□□□ 1.03
CHD1L-204ENST00000431239 TRMT1Q9NXH9 659 aaKnown RBP21.47■■□□□ 1.03
CHD1L-204ENST00000431239 IQSEC3Q9UPP2 1182 aaPredicted RBP21.47■■□□□ 1.03
CHD1L-204ENST00000431239 GOLGA8AA7E2F4 631 aa21.47■■□□□ 1.03
CHD1L-204ENST00000431239 ZBTB43O43298 467 aa21.47■■□□□ 1.03
CHD1L-204ENST00000431239 PRKAB2O43741 272 aa21.47■■□□□ 1.03
CHD1L-204ENST00000431239 SMC2O95347 1197 aa21.47■■□□□ 1.03
CHD1L-204ENST00000431239 LPIN2Q92539 896 aa21.47■■□□□ 1.03
CHD1L-204ENST00000431239 ARID4AP29374 1257 aaPredicted RBP21.46■■□□□ 1.03
CHD1L-204ENST00000431239 MPHOSPH8Q99549 860 aa21.46■■□□□ 1.03
CHD1L-204ENST00000431239 LRP6O75581 1613 aa21.46■■□□□ 1.03
CHD1L-204ENST00000431239 RANBP6O60518 1105 aaKnown RBP21.46■■□□□ 1.03
CHD1L-204ENST00000431239 MTERF4Q7Z6M4 381 aaKnown RBP21.46■■□□□ 1.03
CHD1L-204ENST00000431239 C4AP0C0L4 1744 aa21.46■■□□□ 1.03
CHD1L-204ENST00000431239 C4BP0C0L5 1744 aa21.46■■□□□ 1.03
CHD1L-204ENST00000431239 NUP98P52948 1817 aa21.46■■□□□ 1.03
CHD1L-204ENST00000431239 SUSD4Q5VX71 490 aa21.45■■□□□ 1.03
CHD1L-204ENST00000431239 CLIC6Q96NY7 704 aa21.45■■□□□ 1.03
CHD1L-204ENST00000431239 SLC26A6Q9BXS9 759 aa21.45■■□□□ 1.03
CHD1L-204ENST00000431239 IFIT3O14879 490 aaKnown RBP21.45■■□□□ 1.02
CHD1L-204ENST00000431239 MIGA1Q8NAN2 632 aa21.45■■□□□ 1.02
CHD1L-204ENST00000431239 LY9Q9HBG7 655 aa21.45■■□□□ 1.02
CHD1L-204ENST00000431239 TACC3Q9Y6A5 838 aa21.45■■□□□ 1.02
CHD1L-204ENST00000431239 ATRNO75882 1429 aa21.45■■□□□ 1.02
CHD1L-204ENST00000431239 WDR19Q8NEZ3 1342 aa21.45■■□□□ 1.02
CHD1L-204ENST00000431239 EXOC5O00471 708 aa21.45■■□□□ 1.02
CHD1L-204ENST00000431239 UQCRFS1P1P0C7P4 283 aa21.45■■□□□ 1.02
CHD1L-204ENST00000431239 IARSP41252 1262 aaKnown RBP21.45■■□□□ 1.02
CHD1L-204ENST00000431239 IFNL3Q8IZI9 196 aa21.45■■□□□ 1.02
CHD1L-204ENST00000431239 CMTR1Q8N1G2 835 aaKnown RBP21.45■■□□□ 1.02
CHD1L-204ENST00000431239 IGDCC4Q8TDY8 1250 aa21.45■■□□□ 1.02
CHD1L-204ENST00000431239 ACSBG1Q96GR2 724 aa21.45■■□□□ 1.02
CHD1L-204ENST00000431239 ZNF512BQ96KM6 892 aaPredicted RBP21.45■■□□□ 1.02
CHD1L-204ENST00000431239 ZSWIM5Q9P217 1185 aa21.45■■□□□ 1.02
CHD1L-204ENST00000431239 BCAMP50895 628 aa21.44■■□□□ 1.02
CHD1L-204ENST00000431239 CPLX2Q6PUV4 134 aaKnown RBP21.44■■□□□ 1.02
CHD1L-204ENST00000431239 DDX60Q8IY21 1712 aaKnown RBP21.44■■□□□ 1.02
CHD1L-204ENST00000431239 CDKL5O76039 1030 aa21.44■■□□□ 1.02
CHD1L-204ENST00000431239 SLC5A1P13866 664 aa21.44■■□□□ 1.02
CHD1L-204ENST00000431239 IFNKQ9P0W0 207 aa21.44■■□□□ 1.02
CHD1L-204ENST00000431239 SLC39A14Q15043 492 aa21.43■■□□□ 1.02
CHD1L-204ENST00000431239 NBPF11Q86T75 865 aa21.43■■□□□ 1.02
CHD1L-204ENST00000431239 XPO4Q9C0E2 1151 aaKnown RBP21.43■■□□□ 1.02
CHD1L-204ENST00000431239 SLIT2O94813 1529 aa21.43■■□□□ 1.02
CHD1L-204ENST00000431239 FGFR2P21802 821 aa21.43■■□□□ 1.02
CHD1L-204ENST00000431239 LMOD1P29536 600 aaPredicted RBP21.43■■□□□ 1.02
CHD1L-204ENST00000431239 SYKP43405 635 aa21.43■■□□□ 1.02
CHD1L-204ENST00000431239 MAP3K12Q12852 859 aa21.43■■□□□ 1.02
CHD1L-204ENST00000431239 SPECC1Q5M775 1068 aa21.43■■□□□ 1.02
CHD1L-204ENST00000431239 SLC12A7Q9Y666 1083 aa21.43■■□□□ 1.02
CHD1L-204ENST00000431239 MROH5Q6ZUA9 1318 aa21.43■■□□□ 1.02
CHD1L-204ENST00000431239 CMA1P23946 247 aa21.42■■□□□ 1.02
CHD1L-204ENST00000431239 TDO2P48775 406 aa21.42■■□□□ 1.02
CHD1L-204ENST00000431239 TRIM29Q14134 588 aa21.42■■□□□ 1.02
CHD1L-204ENST00000431239 NAA30Q147X3 362 aaPredicted RBP21.42■■□□□ 1.02
CHD1L-204ENST00000431239 ZNF34Q8IZ26 560 aa21.42■■□□□ 1.02
CHD1L-204ENST00000431239 LCORLQ8N3X6 602 aa21.42■■□□□ 1.02
CHD1L-204ENST00000431239 FAM217BQ9NTX9 383 aaPredicted RBP21.42■■□□□ 1.02
CHD1L-204ENST00000431239 IL6STP40189 918 aaPredicted RBP21.42■■□□□ 1.02
CHD1L-204ENST00000431239 ANKRD36CQ5JPF3 1778 aa21.42■■□□□ 1.02
CHD1L-204ENST00000431239 GUCY1A2P33402 732 aa21.42■■□□□ 1.02
CHD1L-204ENST00000431239 CCZ1BP86790 482 aa21.42■■□□□ 1.02
CHD1L-204ENST00000431239 CCZ1P86791 482 aaPredicted RBP21.42■■□□□ 1.02
CHD1L-204ENST00000431239 PNOCQ13519 176 aa21.42■■□□□ 1.02
CHD1L-204ENST00000431239 NTRK3Q16288 839 aa21.42■■□□□ 1.02
CHD1L-204ENST00000431239 SHC4Q6S5L8 630 aa21.42■■□□□ 1.02
CHD1L-204ENST00000431239 TMEM87BQ96K49 555 aa21.42■■□□□ 1.02
CHD1L-204ENST00000431239 PATL2C9JE40 543 aaKnown RBP21.41■■□□□ 1.02
CHD1L-204ENST00000431239 TMC6Q7Z403 805 aa21.41■■□□□ 1.02
CHD1L-204ENST00000431239 PPP4R3BQ5MIZ7 849 aa21.41■■□□□ 1.02
CHD1L-204ENST00000431239 KCNJ14Q9UNX9 436 aa21.41■■□□□ 1.02
CHD1L-204ENST00000431239 ERVV-1B6SEH8 477 aa21.4■■□□□ 1.02
CHD1L-204ENST00000431239 CEP135Q66GS9 1140 aa21.4■■□□□ 1.02
CHD1L-204ENST00000431239 SLC4A4Q9Y6R1 1079 aa21.4■■□□□ 1.02
CHD1L-204ENST00000431239 GSG1L2A8MUP6 293 aa21.4■■□□□ 1.02
CHD1L-204ENST00000431239 NLRP12P59046 1061 aa21.4■■□□□ 1.02
CHD1L-204ENST00000431239 PTPN21Q16825 1174 aa21.4■■□□□ 1.02
CHD1L-204ENST00000431239 ATP1A3P13637 1013 aa21.39■■□□□ 1.02
CHD1L-204ENST00000431239 MFSD6Q6ZSS7 791 aa21.39■■□□□ 1.02
CHD1L-204ENST00000431239 CCDC94Q9BW85 323 aaPredicted RBP21.39■■□□□ 1.02
CHD1L-204ENST00000431239 ZMYND15Q9H091 742 aa21.39■■□□□ 1.02
CHD1L-204ENST00000431239 PRDM10Q9NQV6 1147 aa21.39■■□□□ 1.02
CHD1L-204ENST00000431239 CCDC112Q8NEF3 446 aa21.39■■□□□ 1.01
CHD1L-204ENST00000431239 STRCQ7RTU9 1775 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms