RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 TRIM17Q9Y577 477 aa22.05■■□□□ 1.12
GPC1-203ENST00000425056 MYH2Q9UKX2 1941 aa22.04■■□□□ 1.12
GPC1-203ENST00000425056 CCL15-CCL14A0A0B4J2E2 113 aa22.04■■□□□ 1.12
GPC1-203ENST00000425056 LDHBP07195 334 aaKnown RBP22.04■■□□□ 1.12
GPC1-203ENST00000425056 CCL15Q16663 113 aa22.04■■□□□ 1.12
GPC1-203ENST00000425056 DCAF15Q66K64 600 aa22.04■■□□□ 1.12
GPC1-203ENST00000425056 ADORA1P30542 326 aa22.03■■□□□ 1.12
GPC1-203ENST00000425056 CCDC102BQ68D86 513 aa22.03■■□□□ 1.12
GPC1-203ENST00000425056 CDC42EP5Q6NZY7 148 aa22.03■■□□□ 1.12
GPC1-203ENST00000425056 ERO1BQ86YB8 467 aa22.03■■□□□ 1.12
GPC1-203ENST00000425056 FAM151AQ8WW52 585 aa22.03■■□□□ 1.12
GPC1-203ENST00000425056 CENPFP49454 3210 aa22.03■■□□□ 1.12
GPC1-203ENST00000425056 PDS5AQ29RF7 1337 aaKnown RBP22.03■■□□□ 1.12
GPC1-203ENST00000425056 AK9Q5TCS8 1911 aa22.02■■□□□ 1.12
GPC1-203ENST00000425056 TRIM27P14373 513 aa22.02■■□□□ 1.12
GPC1-203ENST00000425056 SP3Q02447 781 aa22.02■■□□□ 1.12
GPC1-203ENST00000425056 CD99L2Q8TCZ2 262 aa22.02■■□□□ 1.12
GPC1-203ENST00000425056 ZKSCAN4Q969J2 545 aaPredicted RBP22.02■■□□□ 1.12
GPC1-203ENST00000425056 DOCK2Q92608 1830 aa22.01■■□□□ 1.11
GPC1-203ENST00000425056 IPO8O15397 1037 aaKnown RBP22.01■■□□□ 1.11
GPC1-203ENST00000425056 SRGAP3O43295 1099 aa22.01■■□□□ 1.11
GPC1-203ENST00000425056 ZGPATQ8N5A5 531 aaKnown RBP22.01■■□□□ 1.11
GPC1-203ENST00000425056 ZNF341Q9BYN7 854 aa22.01■■□□□ 1.11
GPC1-203ENST00000425056 RBBP6Q7Z6E9 1792 aaKnown RBP22■■□□□ 1.11
GPC1-203ENST00000425056 NFIAQ12857 509 aa22■■□□□ 1.11
GPC1-203ENST00000425056 PPIL2Q13356 520 aa22■■□□□ 1.11
GPC1-203ENST00000425056 RASGRF1Q13972 1273 aa22■■□□□ 1.11
GPC1-203ENST00000425056 TAF1CQ15572 869 aaPredicted RBP22■■□□□ 1.11
GPC1-203ENST00000425056 ATF7IPQ6VMQ6 1270 aa22■■□□□ 1.11
GPC1-203ENST00000425056 FAM43AQ8N2R8 423 aa22■■□□□ 1.11
GPC1-203ENST00000425056 ZCCHC17Q9NP64 241 aaKnown RBP22■■□□□ 1.11
GPC1-203ENST00000425056 FAM198AQ9UFP1 575 aa22■■□□□ 1.11
GPC1-203ENST00000425056 RFX7Q2KHR2 1363 aa21.99■■□□□ 1.11
GPC1-203ENST00000425056 IRF6O14896 467 aa21.99■■□□□ 1.11
GPC1-203ENST00000425056 CETPP11597 493 aa21.99■■□□□ 1.11
GPC1-203ENST00000425056 TCP10Q12799 353 aa21.99■■□□□ 1.11
GPC1-203ENST00000425056 MIGA2Q7L4E1 593 aa21.99■■□□□ 1.11
GPC1-203ENST00000425056 ZFYVE28Q9HCC9 887 aa21.99■■□□□ 1.11
GPC1-203ENST00000425056 AKAP2Q9Y2D5 859 aa21.99■■□□□ 1.11
GPC1-203ENST00000425056 PTPN22Q9Y2R2 807 aa21.99■■□□□ 1.11
GPC1-203ENST00000425056 GAKO14976 1311 aa21.99■■□□□ 1.11
GPC1-203ENST00000425056 A0A1B0GUL7 405 aa21.98■■□□□ 1.11
GPC1-203ENST00000425056 BCAR3O75815 825 aa21.98■■□□□ 1.11
GPC1-203ENST00000425056 INPP5BP32019 993 aa21.98■■□□□ 1.11
GPC1-203ENST00000425056 TIMM10P62072 90 aa21.98■■□□□ 1.11
GPC1-203ENST00000425056 CAP1Q01518 475 aa21.98■■□□□ 1.11
GPC1-203ENST00000425056 TFCP2Q12800 502 aa21.98■■□□□ 1.11
GPC1-203ENST00000425056 SNAPC2Q13487 334 aa21.98■■□□□ 1.11
GPC1-203ENST00000425056 EFCC1Q9HA90 598 aa21.98■■□□□ 1.11
GPC1-203ENST00000425056 USP40Q9NVE5 1235 aa21.98■■□□□ 1.11
GPC1-203ENST00000425056 ZNF112Q9UJU3 913 aa21.98■■□□□ 1.11
GPC1-203ENST00000425056 TNNQ9UQP3 1299 aa21.98■■□□□ 1.11
GPC1-203ENST00000425056 PPATQ06203 517 aa21.97■■□□□ 1.11
GPC1-203ENST00000425056 MVPQ14764 893 aaKnown RBP21.97■■□□□ 1.11
GPC1-203ENST00000425056 XAGE2Q96GT9 111 aa21.97■■□□□ 1.11
GPC1-203ENST00000425056 ATRNL1Q5VV63 1379 aa21.97■■□□□ 1.11
GPC1-203ENST00000425056 BTBD19C9JJ37 291 aa21.96■■□□□ 1.11
GPC1-203ENST00000425056 GNAI2P04899 355 aa21.96■■□□□ 1.11
GPC1-203ENST00000425056 DZIP1Q86YF9 867 aaKnown RBP21.96■■□□□ 1.11
GPC1-203ENST00000425056 FRAT1Q92837 279 aaPredicted RBP21.96■■□□□ 1.11
GPC1-203ENST00000425056 IDI2Q9BXS1 227 aa21.96■■□□□ 1.11
GPC1-203ENST00000425056 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.96■■□□□ 1.11
GPC1-203ENST00000425056 NOL9Q5SY16 702 aaKnown RBP21.95■■□□□ 1.1
GPC1-203ENST00000425056 BRCA2P51587 3418 aa21.95■■□□□ 1.1
GPC1-203ENST00000425056 TLR2O60603 784 aa21.94■■□□□ 1.1
GPC1-203ENST00000425056 ENTPD3O75355 529 aa21.94■■□□□ 1.1
GPC1-203ENST00000425056 WDHD1O75717 1129 aaPredicted RBP21.94■■□□□ 1.1
GPC1-203ENST00000425056 SLF2Q8IX21 1173 aa21.94■■□□□ 1.1
GPC1-203ENST00000425056 CLUAP1Q96AJ1 413 aa21.94■■□□□ 1.1
GPC1-203ENST00000425056 ARMC5Q96C12 935 aa21.94■■□□□ 1.1
GPC1-203ENST00000425056 FAM163AQ96GL9 167 aaPredicted RBP21.94■■□□□ 1.1
GPC1-203ENST00000425056 ABCF2Q9UG63 623 aa21.94■■□□□ 1.1
GPC1-203ENST00000425056 KCNH4Q9UQ05 1017 aa21.94■■□□□ 1.1
GPC1-203ENST00000425056 ZSWIM8A7E2V4 1837 aa21.94■■□□□ 1.1
GPC1-203ENST00000425056 MKI67P46013 3256 aaKnown RBP21.93■■□□□ 1.1
GPC1-203ENST00000425056 PNMA6EA0A0J9YXQ4 647 aa21.93■■□□□ 1.1
GPC1-203ENST00000425056 RGS3P49796 1198 aa21.93■■□□□ 1.1
GPC1-203ENST00000425056 ARHGEF6Q15052 776 aa21.93■■□□□ 1.1
GPC1-203ENST00000425056 SPTY2D1Q68D10 685 aaPredicted RBP21.93■■□□□ 1.1
GPC1-203ENST00000425056 ZFPM1Q8IX07 1006 aa21.93■■□□□ 1.1
GPC1-203ENST00000425056 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.93■■□□□ 1.1
GPC1-203ENST00000425056 MROH7-TTC4A0A0A0MT08 1334 aa21.92■■□□□ 1.1
GPC1-203ENST00000425056 SLC34A2O95436 690 aa21.91■■□□□ 1.1
GPC1-203ENST00000425056 ARID4AP29374 1257 aaPredicted RBP21.91■■□□□ 1.1
GPC1-203ENST00000425056 BTDP43251 543 aa21.91■■□□□ 1.1
GPC1-203ENST00000425056 ZKSCAN2Q63HK3 967 aa21.91■■□□□ 1.1
GPC1-203ENST00000425056 TMEM57Q8N5G2 664 aa21.91■■□□□ 1.1
GPC1-203ENST00000425056 DOCK1Q14185 1865 aa21.91■■□□□ 1.1
GPC1-203ENST00000425056 KIAA0100Q14667 2235 aaKnown RBP21.91■■□□□ 1.1
GPC1-203ENST00000425056 MECOMQ03112 1051 aa21.9■■□□□ 1.1
GPC1-203ENST00000425056 PRPF38BQ5VTL8 546 aaKnown RBP21.9■■□□□ 1.1
GPC1-203ENST00000425056 ERICH6Q7L0X2 663 aa21.9■■□□□ 1.1
GPC1-203ENST00000425056 SH3BP5LQ7L8J4 393 aa21.9■■□□□ 1.1
GPC1-203ENST00000425056 ANKRD23Q86SG2 305 aa21.9■■□□□ 1.1
GPC1-203ENST00000425056 NEUROD6Q96NK8 337 aa21.9■■□□□ 1.1
GPC1-203ENST00000425056 HMG20BQ9P0W2 317 aa21.9■■□□□ 1.1
GPC1-203ENST00000425056 MAST2Q6P0Q8 1798 aa21.89■■□□□ 1.1
GPC1-203ENST00000425056 PTPRFP10586 1907 aa21.89■■□□□ 1.09
GPC1-203ENST00000425056 POTEFA5A3E0 1075 aa21.89■■□□□ 1.09
GPC1-203ENST00000425056 PHF20L1A8MW92 1017 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms