RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	INHBE	P58166	350 aa		11.36	□□□□□ -0.59
NIF3L1-206	ENST00000416651	ZNF516	Q92618	1163 aa		11.36	□□□□□ -0.59
NIF3L1-206	ENST00000416651	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.36	□□□□□ -0.59
NIF3L1-206	ENST00000416651	NUDC	Q9Y266	331 aa		11.36	□□□□□ -0.59
NIF3L1-206	ENST00000416651	PRSS12	P56730	875 aa		11.35	□□□□□ -0.59
NIF3L1-206	ENST00000416651	ZNF787	Q6DD87	383 aa		11.35	□□□□□ -0.59
NIF3L1-206	ENST00000416651	PODN	Q7Z5L7	613 aa		11.35	□□□□□ -0.59
NIF3L1-206	ENST00000416651	CERS5	Q8N5B7	392 aa		11.35	□□□□□ -0.59
NIF3L1-206	ENST00000416651	CFAP53	Q96M91	514 aa		11.35	□□□□□ -0.59
NIF3L1-206	ENST00000416651	FAM198A	Q9UFP1	575 aa		11.35	□□□□□ -0.59
NIF3L1-206	ENST00000416651	SPEF2	Q9C093	1822 aa		11.35	□□□□□ -0.59
NIF3L1-206	ENST00000416651	SNAP23	O00161	211 aa		11.34	□□□□□ -0.59
NIF3L1-206	ENST00000416651	NFE2L2	Q16236	605 aa		11.34	□□□□□ -0.59
NIF3L1-206	ENST00000416651	NBPF11	Q86T75	865 aa		11.34	□□□□□ -0.59
NIF3L1-206	ENST00000416651	OPTN	Q96CV9	577 aa		11.34	□□□□□ -0.59
NIF3L1-206	ENST00000416651	ALPK3	Q96L96	1907 aa		11.34	□□□□□ -0.59
NIF3L1-206	ENST00000416651	XDH	P47989	1333 aa		11.34	□□□□□ -0.59
NIF3L1-206	ENST00000416651	C3orf80	F5H4A9	247 aa		11.33	□□□□□ -0.6
NIF3L1-206	ENST00000416651	TAF1C	Q15572	869 aa	Predicted RBP	11.33	□□□□□ -0.6
NIF3L1-206	ENST00000416651	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.33	□□□□□ -0.6
NIF3L1-206	ENST00000416651	DEFB123	Q8N688	67 aa		11.33	□□□□□ -0.6
NIF3L1-206	ENST00000416651	PLBD2	Q8NHP8	589 aa		11.33	□□□□□ -0.6
NIF3L1-206	ENST00000416651	TATDN2	Q93075	761 aa		11.33	□□□□□ -0.6
NIF3L1-206	ENST00000416651	RAPGEFL1	Q9UHV5	662 aa		11.33	□□□□□ -0.6
NIF3L1-206	ENST00000416651	TIMELESS	Q9UNS1	1208 aa		11.33	□□□□□ -0.6
NIF3L1-206	ENST00000416651		F8W031	263 aa	Predicted RBP	11.32	□□□□□ -0.6
NIF3L1-206	ENST00000416651	ATP2B4	P23634	1241 aa		11.32	□□□□□ -0.6
NIF3L1-206	ENST00000416651	GTF2I	P78347	998 aa		11.32	□□□□□ -0.6
NIF3L1-206	ENST00000416651	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.32	□□□□□ -0.6
NIF3L1-206	ENST00000416651	OGFOD1	Q8N543	542 aa		11.32	□□□□□ -0.6
NIF3L1-206	ENST00000416651	PRMT6	Q96LA8	375 aa	Predicted RBP	11.32	□□□□□ -0.6
NIF3L1-206	ENST00000416651	PNMA3	Q9UL41	463 aa		11.32	□□□□□ -0.6
NIF3L1-206	ENST00000416651	JAG2	Q9Y219	1238 aa		11.32	□□□□□ -0.6
NIF3L1-206	ENST00000416651	CCL15-CCL14	A0A0B4J2E2	113 aa		11.31	□□□□□ -0.6
NIF3L1-206	ENST00000416651	GRXCR2	A6NFK2	248 aa		11.31	□□□□□ -0.6
NIF3L1-206	ENST00000416651	CCL5	P13501	91 aa		11.31	□□□□□ -0.6
NIF3L1-206	ENST00000416651	LACTB	P83111	547 aa	Predicted RBP	11.31	□□□□□ -0.6
NIF3L1-206	ENST00000416651	CCL15	Q16663	113 aa		11.31	□□□□□ -0.6
NIF3L1-206	ENST00000416651	STRIP1	Q5VSL9	837 aa		11.31	□□□□□ -0.6
NIF3L1-206	ENST00000416651	TTLL5	Q6EMB2	1281 aa		11.31	□□□□□ -0.6
NIF3L1-206	ENST00000416651	MTMR10	Q9NXD2	777 aa		11.31	□□□□□ -0.6
NIF3L1-206	ENST00000416651	MINPP1	Q9UNW1	487 aa		11.31	□□□□□ -0.6
NIF3L1-206	ENST00000416651	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.31	□□□□□ -0.6
NIF3L1-206	ENST00000416651	MED23	Q9ULK4	1368 aa		11.3	□□□□□ -0.6
NIF3L1-206	ENST00000416651	PPP1R12B	O60237	982 aa	Predicted RBP	11.3	□□□□□ -0.6
NIF3L1-206	ENST00000416651	RNF40	O75150	1001 aa		11.3	□□□□□ -0.6
NIF3L1-206	ENST00000416651	OTUD7B	Q6GQQ9	843 aa		11.3	□□□□□ -0.6
NIF3L1-206	ENST00000416651	VEZT	Q9HBM0	779 aa		11.3	□□□□□ -0.6
NIF3L1-206	ENST00000416651	ZFYVE28	Q9HCC9	887 aa		11.3	□□□□□ -0.6
NIF3L1-206	ENST00000416651	VCAN	P13611	3396 aa		11.3	□□□□□ -0.6
NIF3L1-206	ENST00000416651	OSBP	P22059	807 aa		11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	GJA8	P48165	433 aa		11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	CCT4	P50991	539 aa	Known RBP	11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	RASA3	Q14644	834 aa		11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	DLGAP5	Q15398	846 aa		11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	CFAP100	Q494V2	611 aa		11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	ANKRD18A	Q8IVF6	992 aa		11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	NKX2-3	Q8TAU0	364 aa		11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	TRIM47	Q96LD4	638 aa		11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	UNC93B1	Q9H1C4	597 aa		11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	PHAX	Q9H814	394 aa	Known RBP	11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	CPA4	Q9UI42	421 aa		11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.29	□□□□□ -0.6
NIF3L1-206	ENST00000416651	BTBD19	C9JJ37	291 aa		11.28	□□□□□ -0.6
NIF3L1-206	ENST00000416651	FARP2	O94887	1054 aa	Predicted RBP	11.28	□□□□□ -0.6
NIF3L1-206	ENST00000416651	VGLL4	Q14135	290 aa		11.28	□□□□□ -0.6
NIF3L1-206	ENST00000416651	ANKRD13A	Q8IZ07	590 aa		11.28	□□□□□ -0.6
NIF3L1-206	ENST00000416651	DIS3L	Q8TF46	1054 aa	Known RBP	11.28	□□□□□ -0.6
NIF3L1-206	ENST00000416651	TEPSIN	Q96N21	525 aa		11.28	□□□□□ -0.6
NIF3L1-206	ENST00000416651	MYD88	Q99836	296 aa		11.28	□□□□□ -0.6
NIF3L1-206	ENST00000416651	PCGF6	Q9BYE7	350 aa		11.28	□□□□□ -0.6
NIF3L1-206	ENST00000416651	RNF208	Q9H0X6	261 aa		11.28	□□□□□ -0.6
NIF3L1-206	ENST00000416651	STXBP5L	Q9Y2K9	1186 aa		11.28	□□□□□ -0.6
NIF3L1-206	ENST00000416651	ZNF804B	A4D1E1	1349 aa		11.28	□□□□□ -0.6
NIF3L1-206	ENST00000416651	TLR2	O60603	784 aa		11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	PDE8A	O60658	829 aa		11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	GJB1	P08034	283 aa		11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	IREB2	P48200	963 aa	Known RBP	11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	RIPK4	P57078	832 aa		11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	TRIM28	Q13263	835 aa	Known RBP	11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	CCDC152	Q4G0S7	254 aa		11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	U2AF1L4	Q8WU68	220 aa	Known RBP	11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	GDF15	Q99988	308 aa		11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	COA1	Q9GZY4	146 aa		11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	GREM2	Q9H772	168 aa		11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	GABRQ	Q9UN88	632 aa		11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	NR2E3	Q9Y5X4	410 aa		11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	ECM29	Q5VYK3	1845 aa		11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	MYO3B	Q8WXR4	1341 aa		11.27	□□□□□ -0.61
NIF3L1-206	ENST00000416651	COL1A1	P02452	1464 aa	Predicted RBP	11.26	□□□□□ -0.61
NIF3L1-206	ENST00000416651	SYN1	P17600	705 aa		11.26	□□□□□ -0.61
NIF3L1-206	ENST00000416651	GRK4	P32298	578 aa		11.26	□□□□□ -0.61
NIF3L1-206	ENST00000416651	PSMC4	P43686	418 aa		11.26	□□□□□ -0.61
NIF3L1-206	ENST00000416651	HDGFL1	Q5TGJ6	251 aa		11.26	□□□□□ -0.61
NIF3L1-206	ENST00000416651	HTATIP2	Q9BUP3	242 aa		11.26	□□□□□ -0.61
NIF3L1-206	ENST00000416651	SRRD	Q9UH36	339 aa		11.26	□□□□□ -0.61
NIF3L1-206	ENST00000416651	RIPOR2	Q9Y4F9	1068 aa		11.26	□□□□□ -0.61
NIF3L1-206	ENST00000416651	LAS1L	Q9Y4W2	734 aa	Known RBP	11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms