RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 NBPF3Q9H094 633 aa20.23■□□□□ 0.83
CPNE1-208ENST00000414711 COL2A1P02458 1487 aaPredicted RBP20.23■□□□□ 0.83
CPNE1-208ENST00000414711 NEURL1BA8MQ27 555 aa20.22■□□□□ 0.83
CPNE1-208ENST00000414711 DCAF15Q66K64 600 aa20.22■□□□□ 0.83
CPNE1-208ENST00000414711 TAOK2Q9UL54 1235 aa20.22■□□□□ 0.83
CPNE1-208ENST00000414711 DDX60LQ5H9U9 1706 aaKnown RBP20.22■□□□□ 0.83
CPNE1-208ENST00000414711 H7C1W4 665 aa20.21■□□□□ 0.83
CPNE1-208ENST00000414711 TNPO2O14787 897 aaKnown RBP20.21■□□□□ 0.83
CPNE1-208ENST00000414711 INPP5BP32019 993 aa20.21■□□□□ 0.83
CPNE1-208ENST00000414711 KSR2Q6VAB6 950 aa20.21■□□□□ 0.83
CPNE1-208ENST00000414711 CCDC146Q8IYE0 955 aa20.21■□□□□ 0.83
CPNE1-208ENST00000414711 RPAP1Q9BWH6 1393 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-208ENST00000414711 ANKRD18BA2A2Z9 1011 aa20.2■□□□□ 0.82
CPNE1-208ENST00000414711 PI4KAP2A4QPH2 592 aa20.2■□□□□ 0.82
CPNE1-208ENST00000414711 ELL2O00472 640 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-208ENST00000414711 PI4KAP1Q8N8J0 262 aa20.2■□□□□ 0.82
CPNE1-208ENST00000414711 MAFAQ8NHW3 353 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-208ENST00000414711 ZNF341Q9BYN7 854 aa20.2■□□□□ 0.82
CPNE1-208ENST00000414711 C11orf49Q9H6J7 331 aa20.2■□□□□ 0.82
CPNE1-208ENST00000414711 CSF1RP07333 972 aa20.19■□□□□ 0.82
CPNE1-208ENST00000414711 ZNF697Q5TEC3 545 aa20.19■□□□□ 0.82
CPNE1-208ENST00000414711 TMOD2Q9NZR1 351 aa20.19■□□□□ 0.82
CPNE1-208ENST00000414711 GPAT2Q6NUI2 795 aa20.18■□□□□ 0.82
CPNE1-208ENST00000414711 MIGA2Q7L4E1 593 aa20.18■□□□□ 0.82
CPNE1-208ENST00000414711 FAM83AQ86UY5 434 aa20.18■□□□□ 0.82
CPNE1-208ENST00000414711 TDRD7Q8NHU6 1098 aaKnown RBP20.18■□□□□ 0.82
CPNE1-208ENST00000414711 SYMPKQ92797 1274 aaKnown RBP20.18■□□□□ 0.82
CPNE1-208ENST00000414711 PRUNE2Q8WUY3 3088 aa20.18■□□□□ 0.82
CPNE1-208ENST00000414711 MUC3AQ02505 3323 aa20.17■□□□□ 0.82
CPNE1-208ENST00000414711 LAMA2P24043 3122 aaKnown RBP20.16■□□□□ 0.82
CPNE1-208ENST00000414711 MDM2Q00987 491 aaPredicted RBP20.16■□□□□ 0.82
CPNE1-208ENST00000414711 CCDC30Q5VVM6 783 aa20.16■□□□□ 0.82
CPNE1-208ENST00000414711 RAPGEFL1Q9UHV5 662 aa20.16■□□□□ 0.82
CPNE1-208ENST00000414711 PLA2G5P39877 138 aa20.15■□□□□ 0.82
CPNE1-208ENST00000414711 CASP7P55210 303 aa20.15■□□□□ 0.82
CPNE1-208ENST00000414711 FKBP1CQ5VVH2 108 aa20.15■□□□□ 0.82
CPNE1-208ENST00000414711 TEKT1Q969V4 418 aa20.15■□□□□ 0.82
CPNE1-208ENST00000414711 COA7Q96BR5 231 aa20.15■□□□□ 0.82
CPNE1-208ENST00000414711 CDX2Q99626 313 aaPredicted RBP20.15■□□□□ 0.82
CPNE1-208ENST00000414711 PFASO15067 1338 aa20.14■□□□□ 0.81
CPNE1-208ENST00000414711 HMGCRP04035 888 aa20.14■□□□□ 0.81
CPNE1-208ENST00000414711 HDLBPQ00341 1268 aaKnown RBP20.14■□□□□ 0.81
CPNE1-208ENST00000414711 GCKRQ14397 625 aa20.14■□□□□ 0.81
CPNE1-208ENST00000414711 GRIK5Q16478 980 aa20.14■□□□□ 0.81
CPNE1-208ENST00000414711 ZNF112Q9UJU3 913 aa20.14■□□□□ 0.81
CPNE1-208ENST00000414711 CXCL11O14625 94 aa20.13■□□□□ 0.81
CPNE1-208ENST00000414711 PLIN1O60240 522 aa20.13■□□□□ 0.81
CPNE1-208ENST00000414711 ZNF853P0CG23 659 aa20.13■□□□□ 0.81
CPNE1-208ENST00000414711 HIBADHP31937 336 aaKnown RBP20.13■□□□□ 0.81
CPNE1-208ENST00000414711 GYG1P46976 350 aa20.13■□□□□ 0.81
CPNE1-208ENST00000414711 IFIT5Q13325 482 aaKnown RBP20.13■□□□□ 0.81
CPNE1-208ENST00000414711 NOL9Q5SY16 702 aaKnown RBP20.13■□□□□ 0.81
CPNE1-208ENST00000414711 SMCR8Q8TEV9 937 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-208ENST00000414711 ZDHHC15Q96MV8 337 aa20.12■□□□□ 0.81
CPNE1-208ENST00000414711 HMX1Q9NP08 348 aaPredicted RBP20.12■□□□□ 0.81
CPNE1-208ENST00000414711 OGDHLQ9ULD0 1010 aa20.12■□□□□ 0.81
CPNE1-208ENST00000414711 FASTKD5Q7L8L6 764 aaKnown RBP20.11■□□□□ 0.81
CPNE1-208ENST00000414711 C8orf58Q8NAV2 365 aa20.11■□□□□ 0.81
CPNE1-208ENST00000414711 RUNDC1Q96C34 613 aa20.11■□□□□ 0.81
CPNE1-208ENST00000414711 CHMP4AQ9BY43 222 aa20.11■□□□□ 0.81
CPNE1-208ENST00000414711 IFT57Q9NWB7 429 aa20.11■□□□□ 0.81
CPNE1-208ENST00000414711 SLC45A1Q9Y2W3 748 aa20.11■□□□□ 0.81
CPNE1-208ENST00000414711 CHMP3Q9Y3E7 222 aa20.11■□□□□ 0.81
CPNE1-208ENST00000414711 A0A0G2JLL6 359 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-208ENST00000414711 TNFRSF10AO00220 468 aa20.1■□□□□ 0.81
CPNE1-208ENST00000414711 ZEB1P37275 1124 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-208ENST00000414711 PRRT2Q7Z6L0 340 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-208ENST00000414711 FAM122AQ96E09 287 aa20.1■□□□□ 0.81
CPNE1-208ENST00000414711 TRIM32Q13049 653 aa20.09■□□□□ 0.81
CPNE1-208ENST00000414711 APOBEC3HQ6NTF7 200 aaKnown RBP20.09■□□□□ 0.81
CPNE1-208ENST00000414711 GADL1Q6ZQY3 521 aa20.09■□□□□ 0.81
CPNE1-208ENST00000414711 ANKRD13CQ8N6S4 541 aa20.09■□□□□ 0.81
CPNE1-208ENST00000414711 FAM84BQ96KN1 310 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-208ENST00000414711 MYH16Q9H6N6 1097 aa20.09■□□□□ 0.81
CPNE1-208ENST00000414711 DOCK3Q8IZD9 2030 aa20.09■□□□□ 0.81
CPNE1-208ENST00000414711 CHAF1AQ13111 956 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-208ENST00000414711 TBC1D22AQ8WUA7 517 aa20.08■□□□□ 0.81
CPNE1-208ENST00000414711 MYLIPQ8WY64 445 aa20.08■□□□□ 0.81
CPNE1-208ENST00000414711 CNNM1Q9NRU3 951 aa20.08■□□□□ 0.81
CPNE1-208ENST00000414711 CDH23Q9H251 3354 aa20.08■□□□□ 0.8
CPNE1-208ENST00000414711 COL6A1P12109 1028 aa20.07■□□□□ 0.8
CPNE1-208ENST00000414711 GNAI1P63096 354 aa20.07■□□□□ 0.8
CPNE1-208ENST00000414711 UBE4AQ14139 1066 aa20.07■□□□□ 0.8
CPNE1-208ENST00000414711 LRRC26Q2I0M4 334 aa20.07■□□□□ 0.8
CPNE1-208ENST00000414711 TAF7LQ5H9L4 462 aa20.07■□□□□ 0.8
CPNE1-208ENST00000414711 LDHAL6AQ6ZMR3 332 aa20.07■□□□□ 0.8
CPNE1-208ENST00000414711 IQSEC3Q9UPP2 1182 aaPredicted RBP20.07■□□□□ 0.8
CPNE1-208ENST00000414711 FOSL2P15408 326 aa20.06■□□□□ 0.8
CPNE1-208ENST00000414711 FAM110CQ1W6H9 321 aa20.06■□□□□ 0.8
CPNE1-208ENST00000414711 TJAP1Q5JTD0 557 aa20.06■□□□□ 0.8
CPNE1-208ENST00000414711 FAM151AQ8WW52 585 aa20.06■□□□□ 0.8
CPNE1-208ENST00000414711 ZNF594Q96JF6 807 aaPredicted RBP20.06■□□□□ 0.8
CPNE1-208ENST00000414711 LBHD1Q9BQE6 289 aaPredicted RBP20.06■□□□□ 0.8
CPNE1-208ENST00000414711 STK31Q9BXU1 1019 aa20.06■□□□□ 0.8
CPNE1-208ENST00000414711 SEMA6BQ9H3T3 888 aa20.06■□□□□ 0.8
CPNE1-208ENST00000414711 ZHX2Q9Y6X8 837 aa20.06■□□□□ 0.8
CPNE1-208ENST00000414711 MAST3O60307 1309 aa20.05■□□□□ 0.8
CPNE1-208ENST00000414711 FOXO4P98177 505 aa20.05■□□□□ 0.8
CPNE1-208ENST00000414711 MRIQ9BWK5 157 aa20.05■□□□□ 0.8
CPNE1-208ENST00000414711 TMEM265A0A087WTH1 108 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms