RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 IFNKQ9P0W0 207 aa15.45■□□□□ 0.06
COL6A2-204ENST00000409416 SPTLC2O15270 562 aa15.45■□□□□ 0.06
COL6A2-204ENST00000409416 CTAGE5O15320 804 aa15.45■□□□□ 0.06
COL6A2-204ENST00000409416 DPCR1Q3MIW9 517 aa15.45■□□□□ 0.06
COL6A2-204ENST00000409416 LRRC8AQ8IWT6 810 aa15.45■□□□□ 0.06
COL6A2-204ENST00000409416 LLPHQ9BRT6 129 aaKnown RBP15.45■□□□□ 0.06
COL6A2-204ENST00000409416 RCOR1Q9UKL0 485 aa15.45■□□□□ 0.06
COL6A2-204ENST00000409416 RABL6Q3YEC7 729 aaPredicted RBP15.45■□□□□ 0.06
COL6A2-204ENST00000409416 CYB5R4Q7L1T6 521 aa15.45■□□□□ 0.06
COL6A2-204ENST00000409416 APPBP2Q92624 585 aa15.45■□□□□ 0.06
COL6A2-204ENST00000409416 SAP30BPQ9UHR5 308 aaKnown RBP15.45■□□□□ 0.06
COL6A2-204ENST00000409416 CARMIL3Q8ND23 1372 aa15.44■□□□□ 0.06
COL6A2-204ENST00000409416 BTBD18B2RXH4 712 aa15.44■□□□□ 0.06
COL6A2-204ENST00000409416 EIF6P56537 245 aaKnown RBP15.44■□□□□ 0.06
COL6A2-204ENST00000409416 NR5A1Q13285 461 aa15.44■□□□□ 0.06
COL6A2-204ENST00000409416 PNOCQ13519 176 aa15.44■□□□□ 0.06
COL6A2-204ENST00000409416 DSCC1Q9BVC3 393 aa15.44■□□□□ 0.06
COL6A2-204ENST00000409416 CPVLQ9H3G5 476 aa15.44■□□□□ 0.06
COL6A2-204ENST00000409416 IQCB1Q15051 598 aa15.44■□□□□ 0.06
COL6A2-204ENST00000409416 SMARCC2Q8TAQ2 1214 aa15.44■□□□□ 0.06
COL6A2-204ENST00000409416 STX8Q9UNK0 236 aa15.44■□□□□ 0.06
COL6A2-204ENST00000409416 SH3TC1Q8TE82 1336 aa15.44■□□□□ 0.06
COL6A2-204ENST00000409416 KDM3BQ7LBC6 1761 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 SMTNL1A8MU46 457 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 G3V3G9 751 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 CRKLP46109 303 aaKnown RBP15.43■□□□□ 0.06
COL6A2-204ENST00000409416 EVX2Q03828 476 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 RASGRF1Q13972 1273 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 DCAF8Q5TAQ9 597 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 LCORLQ8N3X6 602 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 VPS54Q9P1Q0 977 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 ZBTB38Q8NAP3 1195 aaPredicted RBP15.43■□□□□ 0.06
COL6A2-204ENST00000409416 ALDH8A1Q9H2A2 487 aaPredicted RBP15.43■□□□□ 0.06
COL6A2-204ENST00000409416 CABP5Q9NP86 173 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 FER1L4A9Z1Z3 1794 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 GNPATO15228 680 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 NMT2O60551 498 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 TPM4P67936 248 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 GIGYF2Q6Y7W6 1299 aaKnown RBP15.43■□□□□ 0.06
COL6A2-204ENST00000409416 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.43■□□□□ 0.06
COL6A2-204ENST00000409416 NBPF5PQ86XG9 351 aaPredicted RBP15.43■□□□□ 0.06
COL6A2-204ENST00000409416 SPATA5Q8NB90 893 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 CNNM3Q8NE01 707 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 UTP14AQ9BVJ6 771 aaKnown RBP15.43■□□□□ 0.06
COL6A2-204ENST00000409416 NACAP1Q9BZK3 213 aa15.43■□□□□ 0.06
COL6A2-204ENST00000409416 NCBP1Q09161 790 aaKnown RBP15.42■□□□□ 0.06
COL6A2-204ENST00000409416 SNW1Q13573 536 aaKnown RBP15.42■□□□□ 0.06
COL6A2-204ENST00000409416 KRT40Q6A162 431 aa15.42■□□□□ 0.06
COL6A2-204ENST00000409416 KIF28PB7ZC32 967 aa15.42■□□□□ 0.06
COL6A2-204ENST00000409416 SART3Q15020 963 aaKnown RBP15.42■□□□□ 0.06
COL6A2-204ENST00000409416 ZNF771Q7L3S4 317 aaPredicted RBP15.42■□□□□ 0.06
COL6A2-204ENST00000409416 TRIM22Q8IYM9 498 aa15.42■□□□□ 0.06
COL6A2-204ENST00000409416 MED1Q15648 1581 aaPredicted RBP15.42■□□□□ 0.06
COL6A2-204ENST00000409416 FOXN1O15353 648 aa15.42■□□□□ 0.06
COL6A2-204ENST00000409416 FDPSP14324 419 aaKnown RBP15.42■□□□□ 0.06
COL6A2-204ENST00000409416 GTF2F1P35269 517 aaKnown RBP eCLIP15.42■□□□□ 0.06
COL6A2-204ENST00000409416 SYKP43405 635 aa15.42■□□□□ 0.06
COL6A2-204ENST00000409416 EXOSC10Q01780 885 aaKnown RBP15.42■□□□□ 0.06
COL6A2-204ENST00000409416 WTAPQ15007 396 aa15.42■□□□□ 0.06
COL6A2-204ENST00000409416 SKIDA1Q1XH10 827 aa15.42■□□□□ 0.06
COL6A2-204ENST00000409416 DHX58Q96C10 678 aa15.42■□□□□ 0.06
COL6A2-204ENST00000409416 SLC4A9Q96Q91 983 aa15.42■□□□□ 0.06
COL6A2-204ENST00000409416 XPO4Q9C0E2 1151 aaKnown RBP15.42■□□□□ 0.06
COL6A2-204ENST00000409416 MARF1Q9Y4F3 1742 aaKnown RBP15.41■□□□□ 0.06
COL6A2-204ENST00000409416 ERVV-2B6SEH9 535 aa15.41■□□□□ 0.06
COL6A2-204ENST00000409416 GUCY1A2P33402 732 aa15.41■□□□□ 0.06
COL6A2-204ENST00000409416 DHX40Q8IX18 779 aaKnown RBP15.41■□□□□ 0.06
COL6A2-204ENST00000409416 RIMBP2O15034 1052 aa15.41■□□□□ 0.06
COL6A2-204ENST00000409416 NRDCO43847 1150 aa15.41■□□□□ 0.06
COL6A2-204ENST00000409416 PDE8BO95263 885 aa15.41■□□□□ 0.06
COL6A2-204ENST00000409416 CDC27P30260 824 aa15.41■□□□□ 0.06
COL6A2-204ENST00000409416 USP5P45974 858 aa15.41■□□□□ 0.06
COL6A2-204ENST00000409416 ZNF174Q15697 407 aa15.41■□□□□ 0.06
COL6A2-204ENST00000409416 ILDR1Q86SU0 546 aaPredicted RBP15.41■□□□□ 0.06
COL6A2-204ENST00000409416 SMAP1Q8IYB5 467 aaPredicted RBP15.41■□□□□ 0.06
COL6A2-204ENST00000409416 ZNF215Q9UL58 517 aaPredicted RBP15.41■□□□□ 0.06
COL6A2-204ENST00000409416 MAP3K15Q6ZN16 1313 aa15.41■□□□□ 0.06
COL6A2-204ENST00000409416 SFPQP23246 707 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL6A2-204ENST00000409416 SSRP1Q08945 709 aaKnown RBP15.4■□□□□ 0.06
COL6A2-204ENST00000409416 LRP10Q7Z4F1 713 aa15.4■□□□□ 0.06
COL6A2-204ENST00000409416 CARD10Q9BWT7 1032 aa15.4■□□□□ 0.06
COL6A2-204ENST00000409416 FAM205CA6NFA0 338 aa15.4■□□□□ 0.06
COL6A2-204ENST00000409416 ZNF202O95125 648 aa15.4■□□□□ 0.06
COL6A2-204ENST00000409416 CASP7P55210 303 aa15.4■□□□□ 0.06
COL6A2-204ENST00000409416 RBM43Q6ZSC3 357 aaKnown RBP15.4■□□□□ 0.06
COL6A2-204ENST00000409416 SMYD4Q8IYR2 804 aaPredicted RBP15.4■□□□□ 0.06
COL6A2-204ENST00000409416 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
COL6A2-204ENST00000409416 ZSWIM5Q9P217 1185 aa15.4■□□□□ 0.06
COL6A2-204ENST00000409416 V9GY48 417 aaPredicted RBP15.4■□□□□ 0.06
COL6A2-204ENST00000409416 NEDD4P46934 1319 aa15.4■□□□□ 0.06
COL6A2-204ENST00000409416 LOC102724428A0A0B4J2F2 783 aa15.4■□□□□ 0.06
COL6A2-204ENST00000409416 ATP1A3P13637 1013 aa15.4■□□□□ 0.06
COL6A2-204ENST00000409416 SIK1P57059 783 aa15.4■□□□□ 0.06
COL6A2-204ENST00000409416 ERFEQ4G0M1 354 aa15.4■□□□□ 0.06
COL6A2-204ENST00000409416 PDE8AO60658 829 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 ZPR1O75312 459 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 CAVIN2O95810 425 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 MYSM1Q5VVJ2 828 aa15.39■□□□□ 0.05
COL6A2-204ENST00000409416 ZNF274Q96GC6 653 aaPredicted RBP15.39■□□□□ 0.05
COL6A2-204ENST00000409416 ANGEL1Q9UNK9 670 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms