RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 RASSF8Q8NHQ8 419 aa13.75□□□□□ -0.21
PCNX4-204ENST00000406949 SOS2Q07890 1332 aaPredicted RBP13.75□□□□□ -0.21
PCNX4-204ENST00000406949 RIOK3O14730 519 aaKnown RBP13.75□□□□□ -0.21
PCNX4-204ENST00000406949 ANTXR2P58335 489 aa13.75□□□□□ -0.21
PCNX4-204ENST00000406949 TRIM28Q13263 835 aaKnown RBP13.75□□□□□ -0.21
PCNX4-204ENST00000406949 LINC00301Q8NCQ3 95 aa13.75□□□□□ -0.21
PCNX4-204ENST00000406949 SDR42E1Q8WUS8 393 aa13.75□□□□□ -0.21
PCNX4-204ENST00000406949 CLIC6Q96NY7 704 aa13.75□□□□□ -0.21
PCNX4-204ENST00000406949 SENP2Q9HC62 589 aa13.75□□□□□ -0.21
PCNX4-204ENST00000406949 COL5A2P05997 1499 aaPredicted RBP13.75□□□□□ -0.21
PCNX4-204ENST00000406949 FAM177A1Q8N128 213 aaPredicted RBP13.74□□□□□ -0.21
PCNX4-204ENST00000406949 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCNX4-204ENST00000406949 CSF1RP07333 972 aa13.74□□□□□ -0.21
PCNX4-204ENST00000406949 PFKFB1P16118 471 aa13.74□□□□□ -0.21
PCNX4-204ENST00000406949 CRKLP46109 303 aaKnown RBP13.74□□□□□ -0.21
PCNX4-204ENST00000406949 PTPN14Q15678 1187 aa13.74□□□□□ -0.21
PCNX4-204ENST00000406949 DPCR1Q3MIW9 517 aa13.74□□□□□ -0.21
PCNX4-204ENST00000406949 CACTINQ8WUQ7 758 aaKnown RBP13.74□□□□□ -0.21
PCNX4-204ENST00000406949 RTEL1Q9NZ71 1219 aa13.74□□□□□ -0.21
PCNX4-204ENST00000406949 SFPQP23246 707 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCNX4-204ENST00000406949 GYG1P46976 350 aa13.74□□□□□ -0.21
PCNX4-204ENST00000406949 CAVIN4Q5BKX8 364 aa13.74□□□□□ -0.21
PCNX4-204ENST00000406949 CDC5LQ99459 802 aaKnown RBP13.74□□□□□ -0.21
PCNX4-204ENST00000406949 HOOK1Q9UJC3 728 aaKnown RBP13.74□□□□□ -0.21
PCNX4-204ENST00000406949 ZNF652Q9Y2D9 606 aa13.74□□□□□ -0.21
PCNX4-204ENST00000406949 DCCP43146 1447 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 NEDD4P46934 1319 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 KIF28PB7ZC32 967 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 TERF1P54274 439 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 KIF23Q02241 960 aaPredicted RBP13.73□□□□□ -0.21
PCNX4-204ENST00000406949 UBE3CQ15386 1083 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 PRDM10Q9NQV6 1147 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 KIAA1468Q9P260 1216 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 C5P01031 1676 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 AFDNP55196 1824 aaKnown RBP13.73□□□□□ -0.21
PCNX4-204ENST00000406949 MROH5Q6ZUA9 1318 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 IL6STP40189 918 aaPredicted RBP13.73□□□□□ -0.21
PCNX4-204ENST00000406949 WASF1Q92558 559 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 KRT23Q9C075 422 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCNX4-204ENST00000406949 V9GYY5 206 aaPredicted RBP13.73□□□□□ -0.21
PCNX4-204ENST00000406949 ZMYM6O95789 1325 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 YEATS4O95619 227 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 XBP1P17861 261 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 KLHL10Q6JEL2 608 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 SMIM5Q71RC9 77 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 ANKRD18AQ8IVF6 992 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 TMEM87BQ96K49 555 aa13.73□□□□□ -0.21
PCNX4-204ENST00000406949 SMTNL1A8MU46 457 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 PATL2C9JE40 543 aaKnown RBP13.72□□□□□ -0.21
PCNX4-204ENST00000406949 CDC27P30260 824 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 CCDC144BQ3MJ40 725 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 LCORLQ8N3X6 602 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 CNNM2Q9H8M5 875 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 ZSWIM5Q9P217 1185 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 LOC102724428A0A0B4J2F2 783 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 UBE2Q2LH0YL09 131 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 SIK1P57059 783 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 PTPN21Q16825 1174 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 MTERF4Q7Z6M4 381 aaKnown RBP13.72□□□□□ -0.21
PCNX4-204ENST00000406949 PDCL2Q8N4E4 241 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 CCDC34Q96HJ3 373 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 STRBPQ96SI9 672 aaKnown RBP13.72□□□□□ -0.21
PCNX4-204ENST00000406949 SH2B2O14492 632 aaPredicted RBP13.72□□□□□ -0.21
PCNX4-204ENST00000406949 PNOCQ13519 176 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 DIS3L2Q8IYB7 885 aaKnown RBP13.72□□□□□ -0.21
PCNX4-204ENST00000406949 SLC4A9Q96Q91 983 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 RNF41Q9H4P4 317 aaPredicted RBP13.72□□□□□ -0.21
PCNX4-204ENST00000406949 HPS5Q9UPZ3 1129 aa13.72□□□□□ -0.21
PCNX4-204ENST00000406949 BTBD18B2RXH4 712 aa13.71□□□□□ -0.21
PCNX4-204ENST00000406949 CBX1P83916 185 aa13.71□□□□□ -0.21
PCNX4-204ENST00000406949 CEP135Q66GS9 1140 aa13.71□□□□□ -0.21
PCNX4-204ENST00000406949 UBN2Q6ZU65 1347 aa13.71□□□□□ -0.21
PCNX4-204ENST00000406949 MAGEB6P1A0A0J9YX57 407 aa13.71□□□□□ -0.21
PCNX4-204ENST00000406949 CCDC196A0A1B0GTZ2 297 aa13.71□□□□□ -0.21
PCNX4-204ENST00000406949 PES1O00541 588 aaKnown RBP13.71□□□□□ -0.21
PCNX4-204ENST00000406949 CHRNDQ07001 517 aa13.71□□□□□ -0.21
PCNX4-204ENST00000406949 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.71□□□□□ -0.21
PCNX4-204ENST00000406949 SPDYE4A6NLX3 237 aa13.7□□□□□ -0.22
PCNX4-204ENST00000406949 XPO4Q9C0E2 1151 aaKnown RBP13.7□□□□□ -0.22
PCNX4-204ENST00000406949 CDHR2Q9BYE9 1310 aa13.7□□□□□ -0.22
PCNX4-204ENST00000406949 PLA2G12BQ9BX93 195 aa13.7□□□□□ -0.22
PCNX4-204ENST00000406949 POLR3EQ9NVU0 708 aa13.7□□□□□ -0.22
PCNX4-204ENST00000406949 JCADQ9P266 1359 aa13.7□□□□□ -0.22
PCNX4-204ENST00000406949 SNW1Q13573 536 aaKnown RBP13.7□□□□□ -0.22
PCNX4-204ENST00000406949 PPP4R3BQ5MIZ7 849 aa13.7□□□□□ -0.22
PCNX4-204ENST00000406949 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
PCNX4-204ENST00000406949 FMR1NBQ8N0W7 255 aaPredicted RBP13.7□□□□□ -0.22
PCNX4-204ENST00000406949 CYP2D7A0A087X1C5 515 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 IQCA1Q86XH1 822 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 ESR2Q92731 530 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 BRMS1Q9HCU9 246 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 CABP5Q9NP86 173 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 SCN11AQ9UI33 1791 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 UBASH3AP57075 661 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 AGXT2Q9BYV1 514 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 TMX1Q9H3N1 280 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 BCL2L12Q9HB09 334 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 TFCP2L1Q9NZI6 479 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms