RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 KIF5AQ12840 1032 aa17.64■□□□□ 0.41
GNE-202ENST00000396594 SLC5A4Q9NY91 659 aa17.64■□□□□ 0.41
GNE-202ENST00000396594 TFIP11Q9UBB9 837 aaKnown RBP17.64■□□□□ 0.41
GNE-202ENST00000396594 IGSF3O75054 1194 aa17.64■□□□□ 0.41
GNE-202ENST00000396594 CEP135Q66GS9 1140 aa17.64■□□□□ 0.41
GNE-202ENST00000396594 CTNNBL1Q8WYA6 563 aaPredicted RBP17.64■□□□□ 0.41
GNE-202ENST00000396594 ATP2A2P16615 1042 aaKnown RBP17.64■□□□□ 0.41
GNE-202ENST00000396594 BAG6P46379 1132 aa17.63■□□□□ 0.41
GNE-202ENST00000396594 ABCD1P33897 745 aa17.63■□□□□ 0.41
GNE-202ENST00000396594 UFL1O94874 794 aa17.63■□□□□ 0.41
GNE-202ENST00000396594 EPB41P11171 864 aaKnown RBP17.63■□□□□ 0.41
GNE-202ENST00000396594 TCIRG1Q13488 830 aa17.63■□□□□ 0.41
GNE-202ENST00000396594 FRMD4BQ9Y2L6 1034 aa17.63■□□□□ 0.41
GNE-202ENST00000396594 ERVK-7P63135 1459 aa17.63■□□□□ 0.41
GNE-202ENST00000396594 MBD4O95243 580 aa17.63■□□□□ 0.41
GNE-202ENST00000396594 AK2P54819 239 aa17.63■□□□□ 0.41
GNE-202ENST00000396594 KDM3AQ9Y4C1 1321 aa17.63■□□□□ 0.41
GNE-202ENST00000396594 EIF4A1P60842 406 aaKnown RBP17.63■□□□□ 0.41
GNE-202ENST00000396594 CALCOCO1Q9P1Z2 691 aa17.63■□□□□ 0.41
GNE-202ENST00000396594 ZBED4O75132 1171 aa17.62■□□□□ 0.41
GNE-202ENST00000396594 ABCC4O15439 1325 aa17.62■□□□□ 0.41
GNE-202ENST00000396594 CIAO1O76071 339 aa17.62■□□□□ 0.41
GNE-202ENST00000396594 PABPC4Q13310 644 aaKnown RBP eCLIP17.62■□□□□ 0.41
GNE-202ENST00000396594 USP48Q86UV5 1035 aa17.62■□□□□ 0.41
GNE-202ENST00000396594 ARFGAP2Q8N6H7 521 aa17.62■□□□□ 0.41
GNE-202ENST00000396594 ATG3Q9NT62 314 aa17.62■□□□□ 0.41
GNE-202ENST00000396594 MLKLQ8NB16 471 aa17.62■□□□□ 0.41
GNE-202ENST00000396594 MTUS1Q9ULD2 1270 aa17.62■□□□□ 0.41
GNE-202ENST00000396594 ZCCHC11Q5TAX3 1644 aaKnown RBP17.62■□□□□ 0.41
GNE-202ENST00000396594 SLC8A3P57103 927 aa17.62■□□□□ 0.41
GNE-202ENST00000396594 SPECC1Q5M775 1068 aa17.62■□□□□ 0.41
GNE-202ENST00000396594 THRAP3Q9Y2W1 955 aaKnown RBP17.62■□□□□ 0.41
GNE-202ENST00000396594 GNA14O95837 355 aa17.61■□□□□ 0.41
GNE-202ENST00000396594 YWHAEP62258 255 aaKnown RBP17.61■□□□□ 0.41
GNE-202ENST00000396594 XAGE2Q96GT9 111 aa17.61■□□□□ 0.41
GNE-202ENST00000396594 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.61■□□□□ 0.41
GNE-202ENST00000396594 ANXA1P04083 346 aa17.61■□□□□ 0.41
GNE-202ENST00000396594 PCCAP05165 728 aaPredicted RBP17.61■□□□□ 0.41
GNE-202ENST00000396594 PAXIP1Q6ZW49 1069 aaPredicted RBP17.61■□□□□ 0.41
GNE-202ENST00000396594 PICALMQ13492 652 aa17.61■□□□□ 0.41
GNE-202ENST00000396594 HLTFQ14527 1009 aaKnown RBP eCLIP17.61■□□□□ 0.41
GNE-202ENST00000396594 SKIDA1Q1XH10 827 aa17.61■□□□□ 0.41
GNE-202ENST00000396594 CCDC144CPQ8IYA2 1237 aa17.61■□□□□ 0.41
GNE-202ENST00000396594 SLC17A8Q8NDX2 589 aa17.61■□□□□ 0.41
GNE-202ENST00000396594 IFT74Q96LB3 600 aa17.61■□□□□ 0.41
GNE-202ENST00000396594 NT5C3AQ9H0P0 336 aa17.61■□□□□ 0.41
GNE-202ENST00000396594 CTAGE9A4FU28 777 aa17.61■□□□□ 0.41
GNE-202ENST00000396594 MYL5Q02045 173 aa17.61■□□□□ 0.41
GNE-202ENST00000396594 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
GNE-202ENST00000396594 hCG_1984214I3L0E3 225 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 SGSM2O43147 1006 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 TNNC1P63316 161 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 GRIPAP1Q4V328 841 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 ZNF713Q8N859 430 aaPredicted RBP17.6■□□□□ 0.41
GNE-202ENST00000396594 MAGEF1Q9HAY2 307 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 CDK12Q9NYV4 1490 aaPredicted RBP17.6■□□□□ 0.41
GNE-202ENST00000396594 ANO6Q4KMQ2 910 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 DPP8Q6V1X1 898 aaPredicted RBP17.6■□□□□ 0.41
GNE-202ENST00000396594 HOMER2Q9NSB8 354 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 IMPACTQ9P2X3 320 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 GNG11P61952 73 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 FAM193AP78312 1265 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 CWF19L2Q2TBE0 894 aaKnown RBP17.6■□□□□ 0.41
GNE-202ENST00000396594 TSKSQ9UJT2 592 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 RPAP1Q9BWH6 1393 aaPredicted RBP17.6■□□□□ 0.41
GNE-202ENST00000396594 CTR9Q6PD62 1173 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 CCDC42Q96M95 316 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 JADE2Q9NQC1 790 aa17.6■□□□□ 0.41
GNE-202ENST00000396594 ARID4AP29374 1257 aaPredicted RBP17.59■□□□□ 0.41
GNE-202ENST00000396594 C8orf34Q49A92 452 aa17.59■□□□□ 0.41
GNE-202ENST00000396594 CARD10Q9BWT7 1032 aa17.59■□□□□ 0.41
GNE-202ENST00000396594 ATP5DP30049 168 aa17.59■□□□□ 0.41
GNE-202ENST00000396594 WDR44Q5JSH3 913 aa17.59■□□□□ 0.41
GNE-202ENST00000396594 DCAF15Q66K64 600 aa17.59■□□□□ 0.41
GNE-202ENST00000396594 HACE1Q8IYU2 909 aa17.59■□□□□ 0.41
GNE-202ENST00000396594 CHURC1Q8WUH1 139 aa17.59■□□□□ 0.41
GNE-202ENST00000396594 VEZTQ9HBM0 779 aa17.59■□□□□ 0.41
GNE-202ENST00000396594 NONOQ15233 471 aaKnown RBP eCLIP17.59■□□□□ 0.41
GNE-202ENST00000396594 VTI1AQ96AJ9 217 aa17.59■□□□□ 0.41
GNE-202ENST00000396594 MTRF1LQ9UGC7 380 aaKnown RBP17.59■□□□□ 0.41
GNE-202ENST00000396594 TYRO3Q06418 890 aa17.59■□□□□ 0.41
GNE-202ENST00000396594 CCDC117Q8IWD4 279 aaPredicted RBP17.59■□□□□ 0.41
GNE-202ENST00000396594 NOX5Q96PH1 765 aa17.59■□□□□ 0.41
GNE-202ENST00000396594 DACT1Q9NYF0 836 aa17.59■□□□□ 0.41
GNE-202ENST00000396594 LMAN1P49257 510 aa17.58■□□□□ 0.41
GNE-202ENST00000396594 SLC27A2O14975 620 aa17.58■□□□□ 0.41
GNE-202ENST00000396594 ADCY7P51828 1080 aa17.58■□□□□ 0.41
GNE-202ENST00000396594 CC2D2BQ6DHV5 1058 aa17.58■□□□□ 0.41
GNE-202ENST00000396594 CNKSR1Q969H4 720 aa17.58■□□□□ 0.41
GNE-202ENST00000396594 A2ML1A8K2U0 1454 aa17.58■□□□□ 0.4
GNE-202ENST00000396594 GOLGA5Q8TBA6 731 aa17.58■□□□□ 0.4
GNE-202ENST00000396594 MAIP1Q8WWC4 291 aa17.58■□□□□ 0.4
GNE-202ENST00000396594 ATP8A2Q9NTI2 1148 aa17.58■□□□□ 0.4
GNE-202ENST00000396594 LUC7L2Q9Y383 392 aaKnown RBP17.58■□□□□ 0.4
GNE-202ENST00000396594 RABGAP1Q9Y3P9 1069 aa17.58■□□□□ 0.4
GNE-202ENST00000396594 BRPF3Q9ULD4 1205 aa17.58■□□□□ 0.4
GNE-202ENST00000396594 IQGAP3Q86VI3 1631 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 SPDYE4A6NLX3 237 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 PHKG2P15735 406 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 SPATA5Q8NB90 893 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms