RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 GOLPH3LQ9H4A5 285 aa19.58■□□□□ 0.73
NUP50-202ENST00000396096 GNL3LQ9NVN8 582 aaKnown RBP19.58■□□□□ 0.73
NUP50-202ENST00000396096 TAF1P21675 1872 aa19.58■□□□□ 0.72
NUP50-202ENST00000396096 FAM160A1Q05DH4 1040 aa19.58■□□□□ 0.72
NUP50-202ENST00000396096 ANO6Q4KMQ2 910 aa19.58■□□□□ 0.72
NUP50-202ENST00000396096 CPLX2Q6PUV4 134 aaKnown RBP19.58■□□□□ 0.72
NUP50-202ENST00000396096 CCDC73Q6ZRK6 1079 aa19.58■□□□□ 0.72
NUP50-202ENST00000396096 BCL2L12Q9HB09 334 aa19.58■□□□□ 0.72
NUP50-202ENST00000396096 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.58■□□□□ 0.72
NUP50-202ENST00000396096 CACNA1SQ13698 1873 aa19.57■□□□□ 0.72
NUP50-202ENST00000396096 ZBTB43O43298 467 aa19.57■□□□□ 0.72
NUP50-202ENST00000396096 KIF23Q02241 960 aaPredicted RBP19.57■□□□□ 0.72
NUP50-202ENST00000396096 TMEM67Q5HYA8 995 aa19.57■□□□□ 0.72
NUP50-202ENST00000396096 MYSM1Q5VVJ2 828 aa19.57■□□□□ 0.72
NUP50-202ENST00000396096 ADALQ6DHV7 355 aa19.57■□□□□ 0.72
NUP50-202ENST00000396096 OTUD7BQ6GQQ9 843 aa19.57■□□□□ 0.72
NUP50-202ENST00000396096 RAB11FIP4Q86YS3 637 aa19.57■□□□□ 0.72
NUP50-202ENST00000396096 LINC00301Q8NCQ3 95 aa19.57■□□□□ 0.72
NUP50-202ENST00000396096 CBX8Q9HC52 389 aa19.57■□□□□ 0.72
NUP50-202ENST00000396096 LRP2BPQ9P2M1 347 aa19.57■□□□□ 0.72
NUP50-202ENST00000396096 NARFQ9UHQ1 456 aa19.57■□□□□ 0.72
NUP50-202ENST00000396096 TACC3Q9Y6A5 838 aa19.57■□□□□ 0.72
NUP50-202ENST00000396096 SLC4A4Q9Y6R1 1079 aa19.57■□□□□ 0.72
NUP50-202ENST00000396096 RPS6KA4O75676 772 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 CTDSPL2Q05D32 466 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 NTRK3Q16288 839 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 FNBP4Q8N3X1 1017 aaPredicted RBP19.56■□□□□ 0.72
NUP50-202ENST00000396096 KCNG4Q8TDN1 519 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 NAP1L5Q96NT1 182 aaPredicted RBP19.56■□□□□ 0.72
NUP50-202ENST00000396096 SENP2Q9HC62 589 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 ZSWIM5Q9P217 1185 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 COL1A1P02452 1464 aaPredicted RBP19.56■□□□□ 0.72
NUP50-202ENST00000396096 STK36Q9NRP7 1315 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 PRKAB2O43741 272 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 CDC27P30260 824 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 ME1P48163 572 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 TBC1D9BQ66K14 1250 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 MFSD6Q6ZSS7 791 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 TDRD7Q8NHU6 1098 aaKnown RBP19.56■□□□□ 0.72
NUP50-202ENST00000396096 NGLY1Q96IV0 654 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 NYXQ9GZU5 481 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 PCDHA7Q9UN72 937 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 MINPP1Q9UNW1 487 aa19.56■□□□□ 0.72
NUP50-202ENST00000396096 TDO2P48775 406 aa19.55■□□□□ 0.72
NUP50-202ENST00000396096 FAM217BQ9NTX9 383 aaPredicted RBP19.55■□□□□ 0.72
NUP50-202ENST00000396096 KIF28PB7ZC32 967 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 CYP7A1P22680 504 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 FSIP1Q8NA03 581 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 MRPS27Q92552 414 aaKnown RBP19.54■□□□□ 0.72
NUP50-202ENST00000396096 C8orf37Q96NL8 207 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 ALG1Q9BT22 464 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 ANAPC4Q9UJX5 808 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 PDS5AQ29RF7 1337 aaKnown RBP19.54■□□□□ 0.72
NUP50-202ENST00000396096 GOLGA8AA7E2F4 631 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 IFIT3O14879 490 aaKnown RBP19.54■□□□□ 0.72
NUP50-202ENST00000396096 SEMA3EO15041 775 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 KINO60870 393 aaKnown RBP19.54■□□□□ 0.72
NUP50-202ENST00000396096 TPM3P06753 285 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 RCAN1P53805 252 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 NFXL1Q6ZNB6 911 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 LUZP1Q86V48 1076 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 FMR1NBQ8N0W7 255 aaPredicted RBP19.54■□□□□ 0.72
NUP50-202ENST00000396096 RNF41Q9H4P4 317 aaPredicted RBP19.54■□□□□ 0.72
NUP50-202ENST00000396096 INCENPQ9NQS7 918 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 CLIC4Q9Y696 253 aa19.54■□□□□ 0.72
NUP50-202ENST00000396096 TAF1LQ8IZX4 1826 aa19.53■□□□□ 0.72
NUP50-202ENST00000396096 LY75O60449 1722 aa19.53■□□□□ 0.72
NUP50-202ENST00000396096 ZBTB22O15209 634 aa19.53■□□□□ 0.72
NUP50-202ENST00000396096 GYG1P46976 350 aa19.53■□□□□ 0.72
NUP50-202ENST00000396096 STK38Q15208 465 aa19.53■□□□□ 0.72
NUP50-202ENST00000396096 CAVIN4Q5BKX8 364 aa19.53■□□□□ 0.72
NUP50-202ENST00000396096 MICU3Q86XE3 530 aa19.53■□□□□ 0.72
NUP50-202ENST00000396096 SLC12A7Q9Y666 1083 aa19.53■□□□□ 0.72
NUP50-202ENST00000396096 MYH13Q9UKX3 1938 aa19.52■□□□□ 0.72
NUP50-202ENST00000396096 CCDC69A6NI79 296 aa19.52■□□□□ 0.72
NUP50-202ENST00000396096 SPTLC2O15270 562 aa19.52■□□□□ 0.72
NUP50-202ENST00000396096 POLR3DP05423 398 aaPredicted RBP19.52■□□□□ 0.72
NUP50-202ENST00000396096 ZNF165P49910 485 aa19.52■□□□□ 0.72
NUP50-202ENST00000396096 TERF1P54274 439 aa19.52■□□□□ 0.72
NUP50-202ENST00000396096 KIAA2012Q0VF49 1180 aa19.52■□□□□ 0.72
NUP50-202ENST00000396096 KRT40Q6A162 431 aa19.52■□□□□ 0.72
NUP50-202ENST00000396096 ADGRA1Q86SQ6 560 aa19.52■□□□□ 0.72
NUP50-202ENST00000396096 CELF1Q92879 486 aaKnown RBP19.52■□□□□ 0.72
NUP50-202ENST00000396096 GJB4Q9NTQ9 266 aa19.52■□□□□ 0.72
NUP50-202ENST00000396096 MAGEB6P1A0A0J9YX57 407 aa19.52■□□□□ 0.71
NUP50-202ENST00000396096 RANBP6O60518 1105 aaKnown RBP19.52■□□□□ 0.71
NUP50-202ENST00000396096 IARSP41252 1262 aaKnown RBP19.52■□□□□ 0.71
NUP50-202ENST00000396096 SART3Q15020 963 aaKnown RBP19.52■□□□□ 0.71
NUP50-202ENST00000396096 STX1AQ16623 288 aa19.52■□□□□ 0.71
NUP50-202ENST00000396096 ANO1Q5XXA6 986 aa19.52■□□□□ 0.71
NUP50-202ENST00000396096 SYNE3Q6ZMZ3 975 aa19.52■□□□□ 0.71
NUP50-202ENST00000396096 PTF1AQ7RTS3 328 aa19.52■□□□□ 0.71
NUP50-202ENST00000396096 FBXO33Q7Z6M2 555 aa19.52■□□□□ 0.71
NUP50-202ENST00000396096 TMTC2Q8N394 836 aa19.52■□□□□ 0.71
NUP50-202ENST00000396096 MIGA1Q8NAN2 632 aa19.52■□□□□ 0.71
NUP50-202ENST00000396096 FAM84BQ96KN1 310 aaPredicted RBP19.52■□□□□ 0.71
NUP50-202ENST00000396096 RIOK1Q9BRS2 568 aaKnown RBP19.52■□□□□ 0.71
NUP50-202ENST00000396096 IFNAR1P17181 557 aa19.51■□□□□ 0.71
NUP50-202ENST00000396096 RXRAP19793 462 aa19.51■□□□□ 0.71
NUP50-202ENST00000396096 GTF2E1P29083 439 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms