RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 NT5C2P49902 561 aa16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 TOB2Q14106 344 aaPredicted RBP16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 LARP6Q9BRS8 491 aaKnown RBP16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 CHD4Q14839 1912 aa16.3■□□□□ 0.2
TNFSF13-203ENST00000380535 PDCP20941 246 aa16.29■□□□□ 0.2
TNFSF13-203ENST00000380535 FAM193AP78312 1265 aa16.29■□□□□ 0.2
TNFSF13-203ENST00000380535 EN1Q05925 392 aaPredicted RBP16.29■□□□□ 0.2
TNFSF13-203ENST00000380535 Q6ZUG5 572 aa16.29■□□□□ 0.2
TNFSF13-203ENST00000380535 STOX1Q6ZVD7 989 aa16.29■□□□□ 0.2
TNFSF13-203ENST00000380535 IFNL3Q8IZI9 196 aa16.29■□□□□ 0.2
TNFSF13-203ENST00000380535 SLC16A10Q8TF71 515 aa16.29■□□□□ 0.2
TNFSF13-203ENST00000380535 MTA3Q9BTC8 594 aa16.29■□□□□ 0.2
TNFSF13-203ENST00000380535 NSFL1CQ9UNZ2 370 aaKnown RBP16.29■□□□□ 0.2
TNFSF13-203ENST00000380535 LDHCP07864 332 aa16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 PCP11498 1178 aaKnown RBP16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 IL1R1P14778 569 aa16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 MCTP1Q6DN14 999 aa16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 TBC1D22AQ8WUA7 517 aa16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 LLPHQ9BRT6 129 aaKnown RBP16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 RNF41Q9H4P4 317 aaPredicted RBP16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 TPCN1Q9ULQ1 816 aa16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 IQSEC3Q9UPP2 1182 aaPredicted RBP16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 LARGE1O95461 756 aa16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 COL9A3Q14050 684 aaPredicted RBP16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 ME3Q16798 604 aa16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 CC2D2BQ6DHV5 1058 aa16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 ZNF274Q96GC6 653 aaPredicted RBP16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 KIF3AQ9Y496 699 aa16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 SLC4A4Q9Y6R1 1079 aa16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 COL11A2P13942 1736 aaPredicted RBP16.28■□□□□ 0.2
TNFSF13-203ENST00000380535 SLF2Q8IX21 1173 aa16.27■□□□□ 0.2
TNFSF13-203ENST00000380535 TBC1D16Q8TBP0 767 aa16.27■□□□□ 0.2
TNFSF13-203ENST00000380535 NSUN4Q96CB9 384 aaKnown RBP16.27■□□□□ 0.2
TNFSF13-203ENST00000380535 KRT23Q9C075 422 aa16.27■□□□□ 0.2
TNFSF13-203ENST00000380535 ARMT1Q9H993 441 aa16.27■□□□□ 0.2
TNFSF13-203ENST00000380535 RRAGDQ9NQL2 400 aaPredicted RBP16.27■□□□□ 0.2
TNFSF13-203ENST00000380535 GSG1L2A8MUP6 293 aa16.27■□□□□ 0.19
TNFSF13-203ENST00000380535 H0YIN7 160 aa16.27■□□□□ 0.19
TNFSF13-203ENST00000380535 KLRK1P26718 216 aa16.27■□□□□ 0.19
TNFSF13-203ENST00000380535 EVCP57679 992 aa16.27■□□□□ 0.19
TNFSF13-203ENST00000380535 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.19
TNFSF13-203ENST00000380535 TTLL5Q6EMB2 1281 aa16.27■□□□□ 0.19
TNFSF13-203ENST00000380535 RGS22Q8NE09 1264 aa16.27■□□□□ 0.19
TNFSF13-203ENST00000380535 EYA3Q99504 573 aa16.27■□□□□ 0.19
TNFSF13-203ENST00000380535 ATP6V1DQ9Y5K8 247 aa16.27■□□□□ 0.19
TNFSF13-203ENST00000380535 LDHBP07195 334 aaKnown RBP16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 TDO2P48775 406 aa16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 FAM43BQ6ZT52 329 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 DZIP1Q86YF9 867 aaKnown RBP16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 CCDC83Q8IWF9 413 aa16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 MB21D2Q8IYB1 491 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 TMEM87BQ96K49 555 aa16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 LMBRD1Q9NUN5 540 aa16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 SUGT1Q9Y2Z0 365 aa16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 PFKFB2O60825 505 aa16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 CHAF1AQ13111 956 aaPredicted RBP16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 GAS2L3Q86XJ1 694 aa16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 LCORLQ8N3X6 602 aa16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 GTF3C6Q969F1 213 aa16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 CNKSR1Q969H4 720 aa16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 RIOK1Q9BRS2 568 aaKnown RBP16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 NOL10Q9BSC4 688 aaKnown RBP16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 CRNKL1Q9BZJ0 848 aaKnown RBP16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 COA1Q9GZY4 146 aa16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 CD209Q9NNX6 404 aa16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 ANAPC4Q9UJX5 808 aa16.26■□□□□ 0.19
TNFSF13-203ENST00000380535 MECOMQ03112 1051 aa16.25■□□□□ 0.19
TNFSF13-203ENST00000380535 MPNDQ8N594 471 aa16.25■□□□□ 0.19
TNFSF13-203ENST00000380535 BRF1Q92994 677 aa16.25■□□□□ 0.19
TNFSF13-203ENST00000380535 ATP8A2Q9NTI2 1148 aa16.25■□□□□ 0.19
TNFSF13-203ENST00000380535 WTIPA6NIX2 430 aaPredicted RBP16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 DHX16O60231 1041 aaKnown RBP16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 HMGN5P82970 282 aaKnown RBP16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 ST3GAL1Q11201 340 aa16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 TXNRD3Q86VQ6 643 aa16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 STAG1Q8WVM7 1258 aa16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 DDX49Q9Y6V7 483 aaKnown RBP16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 FAM205AQ6ZU69 1335 aa16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 C6orf229H3BNL8 230 aa16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 PRC1O43663 620 aa16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 BAG3O95817 575 aa16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 MMP14P50281 582 aa16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 HAND2P61296 217 aa16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 AKNAD1Q5T1N1 836 aa16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 FOXD4L5Q5VV16 416 aaPredicted RBP16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 C2CD5Q86YS7 1000 aa16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 FOXD4L4Q8WXT5 416 aaPredicted RBP16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 TCEANC2Q96MN5 208 aa16.24■□□□□ 0.19
TNFSF13-203ENST00000380535 GJB2P29033 226 aa16.23■□□□□ 0.19
TNFSF13-203ENST00000380535 MFSD6Q6ZSS7 791 aa16.23■□□□□ 0.19
TNFSF13-203ENST00000380535 PRDM16Q9HAZ2 1276 aa16.23■□□□□ 0.19
TNFSF13-203ENST00000380535 EPB41L4AQ9HCS5 686 aaPredicted RBP16.23■□□□□ 0.19
TNFSF13-203ENST00000380535 SYT1P21579 422 aa16.23■□□□□ 0.19
TNFSF13-203ENST00000380535 SART3Q15020 963 aaKnown RBP16.23■□□□□ 0.19
TNFSF13-203ENST00000380535 DPP8Q6V1X1 898 aaPredicted RBP16.23■□□□□ 0.19
TNFSF13-203ENST00000380535 MIGA1Q8NAN2 632 aa16.23■□□□□ 0.19
TNFSF13-203ENST00000380535 ZC3H12CQ9C0D7 883 aaKnown RBP16.23■□□□□ 0.19
TNFSF13-203ENST00000380535 POLLQ9UGP5 575 aa16.23■□□□□ 0.19
TNFSF13-203ENST00000380535 LAMB1P07942 1786 aa16.22■□□□□ 0.19
TNFSF13-203ENST00000380535 DLEC1Q9Y238 1755 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms