RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 RXRBP28702 533 aa7.2□□□□□ -1.26
USP48-202ENST00000374730 INTS5Q6P9B9 1019 aaKnown RBP7.2□□□□□ -1.26
USP48-202ENST00000374730 EZH1Q92800 747 aaPredicted RBP7.2□□□□□ -1.26
USP48-202ENST00000374730 TRAIPQ9BWF2 469 aa7.2□□□□□ -1.26
USP48-202ENST00000374730 DNMBPQ6XZF7 1577 aa7.2□□□□□ -1.26
USP48-202ENST00000374730 PNMA6FA0A0J9YX94 578 aa7.19□□□□□ -1.26
USP48-202ENST00000374730 PRR19A6NJB7 356 aa7.19□□□□□ -1.26
USP48-202ENST00000374730 DRD2P14416 443 aa7.19□□□□□ -1.26
USP48-202ENST00000374730 SSTR4P31391 388 aa7.19□□□□□ -1.26
USP48-202ENST00000374730 GRIK1P39086 918 aa7.19□□□□□ -1.26
USP48-202ENST00000374730 USP11P51784 963 aa7.19□□□□□ -1.26
USP48-202ENST00000374730 PLCB3Q01970 1234 aa7.19□□□□□ -1.26
USP48-202ENST00000374730 CPSF6Q16630 551 aaKnown RBP eCLIP7.19□□□□□ -1.26
USP48-202ENST00000374730 ZSCAN29Q8IWY8 852 aaPredicted RBP7.19□□□□□ -1.26
USP48-202ENST00000374730 GIMAP7Q8NHV1 300 aa7.19□□□□□ -1.26
USP48-202ENST00000374730 SHKBP1Q8TBC3 707 aa7.19□□□□□ -1.26
USP48-202ENST00000374730 FBF1Q8TES7 1133 aa7.19□□□□□ -1.26
USP48-202ENST00000374730 PPP4R2Q9NY27 417 aa7.19□□□□□ -1.26
USP48-202ENST00000374730 ARAP1Q96P48 1450 aa7.18□□□□□ -1.26
USP48-202ENST00000374730 FAM95CA0A1B0GW59 222 aa7.18□□□□□ -1.26
USP48-202ENST00000374730 HNRNPUQ00839 825 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP48-202ENST00000374730 FMR1Q06787 632 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP48-202ENST00000374730 FAAP100Q0VG06 881 aa7.18□□□□□ -1.26
USP48-202ENST00000374730 CDPF1Q6NVV7 123 aa7.18□□□□□ -1.26
USP48-202ENST00000374730 PAOXQ6QHF9 649 aa7.18□□□□□ -1.26
USP48-202ENST00000374730 DTHD1Q6ZMT9 781 aa7.18□□□□□ -1.26
USP48-202ENST00000374730 BCO2Q9BYV7 579 aa7.18□□□□□ -1.26
USP48-202ENST00000374730 FGD5Q6ZNL6 1462 aa7.17□□□□□ -1.26
USP48-202ENST00000374730 LAMC3Q9Y6N6 1575 aa7.17□□□□□ -1.26
USP48-202ENST00000374730 ECEL1O95672 775 aa7.17□□□□□ -1.26
USP48-202ENST00000374730 FCGRTP55899 365 aa7.17□□□□□ -1.26
USP48-202ENST00000374730 PI16Q6UXB8 463 aa7.17□□□□□ -1.26
USP48-202ENST00000374730 FBLIM1Q8WUP2 373 aa7.17□□□□□ -1.26
USP48-202ENST00000374730 MFSD14AQ96MC6 490 aa7.17□□□□□ -1.26
USP48-202ENST00000374730 ASB16Q96NS5 453 aa7.17□□□□□ -1.26
USP48-202ENST00000374730 GSX1Q9H4S2 264 aaPredicted RBP7.17□□□□□ -1.26
USP48-202ENST00000374730 RAD18Q9NS91 495 aa7.17□□□□□ -1.26
USP48-202ENST00000374730 ACTL7BQ9Y614 415 aa7.17□□□□□ -1.26
USP48-202ENST00000374730 FANCD2Q9BXW9 1451 aa7.17□□□□□ -1.26
USP48-202ENST00000374730 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.16□□□□□ -1.26
USP48-202ENST00000374730 WDR64B1ANS9 1081 aa7.16□□□□□ -1.26
USP48-202ENST00000374730 MED26O95402 600 aa7.16□□□□□ -1.26
USP48-202ENST00000374730 PPP2R3AQ06190 1150 aa7.16□□□□□ -1.26
USP48-202ENST00000374730 PDE3AQ14432 1141 aa7.16□□□□□ -1.26
USP48-202ENST00000374730 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.16□□□□□ -1.26
USP48-202ENST00000374730 AKAP4Q5JQC9 854 aa7.16□□□□□ -1.26
USP48-202ENST00000374730 WDR18Q9BV38 432 aa7.16□□□□□ -1.26
USP48-202ENST00000374730 KRT82Q9NSB4 513 aa7.16□□□□□ -1.26
USP48-202ENST00000374730 AP4E1Q9UPM8 1137 aa7.16□□□□□ -1.26
USP48-202ENST00000374730 CUX2O14529 1486 aa7.16□□□□□ -1.26
USP48-202ENST00000374730 WDR97A6NE52 1622 aa7.16□□□□□ -1.26
USP48-202ENST00000374730 AOC2O75106 756 aa7.15□□□□□ -1.26
USP48-202ENST00000374730 F13BP05160 661 aa7.15□□□□□ -1.26
USP48-202ENST00000374730 SPINK2P20155 84 aa7.15□□□□□ -1.26
USP48-202ENST00000374730 MAP7Q14244 749 aa7.15□□□□□ -1.26
USP48-202ENST00000374730 NFKBIBQ15653 356 aa7.15□□□□□ -1.26
USP48-202ENST00000374730 METTL22Q9BUU2 404 aaPredicted RBP7.15□□□□□ -1.26
USP48-202ENST00000374730 SRCIN1Q9C0H9 1055 aa7.15□□□□□ -1.26
USP48-202ENST00000374730 ATG3Q9NT62 314 aa7.15□□□□□ -1.26
USP48-202ENST00000374730 TMEM39AQ9NV64 488 aa7.15□□□□□ -1.26
USP48-202ENST00000374730 PRKAG2Q9UGJ0 569 aa7.15□□□□□ -1.26
USP48-202ENST00000374730 GPN3Q9UHW5 284 aaPredicted RBP7.15□□□□□ -1.26
USP48-202ENST00000374730 GSTP1P09211 210 aaKnown RBP7.14□□□□□ -1.27
USP48-202ENST00000374730 CUL7Q14999 1698 aa7.14□□□□□ -1.27
USP48-202ENST00000374730 ALG1LQ6GMV1 187 aa7.14□□□□□ -1.27
USP48-202ENST00000374730 DYMQ7RTS9 669 aa7.14□□□□□ -1.27
USP48-202ENST00000374730 DTX1Q86Y01 620 aa7.14□□□□□ -1.27
USP48-202ENST00000374730 ABCA10Q8WWZ4 1543 aa7.14□□□□□ -1.27
USP48-202ENST00000374730 ACSS3Q9H6R3 686 aa7.14□□□□□ -1.27
USP48-202ENST00000374730 PIM2Q9P1W9 311 aa7.14□□□□□ -1.27
USP48-202ENST00000374730 TOPBP1Q92547 1522 aa7.13□□□□□ -1.27
USP48-202ENST00000374730 ARHGAP35Q9NRY4 1499 aa7.13□□□□□ -1.27
USP48-202ENST00000374730 MAPK8P45983 427 aa7.13□□□□□ -1.27
USP48-202ENST00000374730 ZNF157P51786 506 aaPredicted RBP7.13□□□□□ -1.27
USP48-202ENST00000374730 NXPE4Q6UWF7 544 aa7.13□□□□□ -1.27
USP48-202ENST00000374730 ZAR1Q86SH2 424 aa7.13□□□□□ -1.27
USP48-202ENST00000374730 C3orf58Q8NDZ4 430 aa7.13□□□□□ -1.27
USP48-202ENST00000374730 OSBPL1AQ9BXW6 950 aa7.13□□□□□ -1.27
USP48-202ENST00000374730 SEMA6CQ9H3T2 930 aa7.13□□□□□ -1.27
USP48-202ENST00000374730 CCDC86Q9H6F5 360 aaKnown RBP7.13□□□□□ -1.27
USP48-202ENST00000374730 FAM105AQ9NUU6 356 aa7.13□□□□□ -1.27
USP48-202ENST00000374730 MAP3K1Q13233 1512 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 GIPC1O14908 333 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 TMPRSS2O15393 492 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 RAB6AP20340 208 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 GSTT1P30711 240 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 ASPAP45381 313 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 ATP2B2Q01814 1243 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 KIF4BQ2VIQ3 1234 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 PDZD3Q86UT5 571 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 FBXL6Q8N531 539 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 GATA6Q92908 595 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 TBC1D32Q96NH3 1257 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 PPM1HQ9ULR3 514 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 LEMD3Q9Y2U8 911 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 CTTNBP2Q8WZ74 1663 aa7.12□□□□□ -1.27
USP48-202ENST00000374730 POLA1P09884 1462 aaPredicted RBP7.11□□□□□ -1.27
USP48-202ENST00000374730 NFICP08651 508 aa7.11□□□□□ -1.27
USP48-202ENST00000374730 SLFN14P0C7P3 912 aa7.11□□□□□ -1.27
USP48-202ENST00000374730 FOSL1P15407 271 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms