RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 HDXQ7Z353 690 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 ZNF496Q96IT1 587 aaPredicted RBP19.76■□□□□ 0.75
PTPRU-202ENST00000373779 RSPH14Q9UHP6 348 aa19.76■□□□□ 0.75
PTPRU-202ENST00000373779 HEATR3Q7Z4Q2 680 aa19.75■□□□□ 0.75
PTPRU-202ENST00000373779 BCCIPQ9P287 314 aaKnown RBP eCLIP19.75■□□□□ 0.75
PTPRU-202ENST00000373779 ADCY9O60503 1353 aa19.75■□□□□ 0.75
PTPRU-202ENST00000373779 POLR2DO15514 142 aaKnown RBP19.75■□□□□ 0.75
PTPRU-202ENST00000373779 ASIC1P78348 528 aa19.75■□□□□ 0.75
PTPRU-202ENST00000373779 DRC1Q96MC2 740 aa19.75■□□□□ 0.75
PTPRU-202ENST00000373779 MCM7P33993 719 aa19.75■□□□□ 0.75
PTPRU-202ENST00000373779 MED14O60244 1454 aa19.75■□□□□ 0.75
PTPRU-202ENST00000373779 USP6P35125 1406 aa19.75■□□□□ 0.75
PTPRU-202ENST00000373779 KIF5AQ12840 1032 aa19.75■□□□□ 0.75
PTPRU-202ENST00000373779 DIS3L2Q8IYB7 885 aaKnown RBP19.75■□□□□ 0.75
PTPRU-202ENST00000373779 HAUS7Q99871 368 aa19.75■□□□□ 0.75
PTPRU-202ENST00000373779 MAATS1Q7Z4T9 603 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 TMEM87AQ8NBN3 555 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 SETBP1Q9Y6X0 1596 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 ARAP3Q8WWN8 1544 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 TMCO5BA8MYB1 307 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 MYO1BO43795 1136 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 TAF5LO75529 589 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 TSPY3P0CV98 308 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 TSPY8P0CW00 308 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 SPECC1Q5M775 1068 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 DZIP3Q86Y13 1208 aaKnown RBP19.74■□□□□ 0.75
PTPRU-202ENST00000373779 SLF2Q8IX21 1173 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 LUC7L2Q9Y383 392 aaKnown RBP19.74■□□□□ 0.75
PTPRU-202ENST00000373779 CCT6AP40227 531 aaKnown RBP19.74■□□□□ 0.75
PTPRU-202ENST00000373779 KLHL34Q8N239 644 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 PHKBQ93100 1093 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 CAPZA3Q96KX2 299 aa19.74■□□□□ 0.75
PTPRU-202ENST00000373779 RBM28Q9NW13 759 aaKnown RBP19.74■□□□□ 0.75
PTPRU-202ENST00000373779 VWA3AA6NCI4 1184 aa19.73■□□□□ 0.75
PTPRU-202ENST00000373779 ITGA6P23229 1130 aa19.73■□□□□ 0.75
PTPRU-202ENST00000373779 CTNND2Q9UQB3 1225 aa19.73■□□□□ 0.75
PTPRU-202ENST00000373779 NFE2L3Q9Y4A8 694 aa19.73■□□□□ 0.75
PTPRU-202ENST00000373779 LRRC7Q96NW7 1537 aa19.73■□□□□ 0.75
PTPRU-202ENST00000373779 LARGE1O95461 756 aa19.73■□□□□ 0.75
PTPRU-202ENST00000373779 NOP2P46087 812 aaKnown RBP19.73■□□□□ 0.75
PTPRU-202ENST00000373779 PFKFB1P16118 471 aa19.73■□□□□ 0.75
PTPRU-202ENST00000373779 CDC25BP30305 580 aa19.73■□□□□ 0.75
PTPRU-202ENST00000373779 SCRN1Q12765 414 aa19.73■□□□□ 0.75
PTPRU-202ENST00000373779 KIAA1524Q8TCG1 905 aa19.73■□□□□ 0.75
PTPRU-202ENST00000373779 PI4K2BQ8TCG2 481 aa19.73■□□□□ 0.75
PTPRU-202ENST00000373779 ZNF174Q15697 407 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 WWC2Q6AWC2 1192 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 CRACR2BQ8N4Y2 399 aaPredicted RBP19.72■□□□□ 0.75
PTPRU-202ENST00000373779 GOPCQ9HD26 462 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 NRBP1Q9UHY1 535 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 SYNRGQ9UMZ2 1314 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 CHMP4BP1P59074 171 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 CCDC42Q96M95 316 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 TLR7Q9NYK1 1049 aaKnown RBP19.72■□□□□ 0.75
PTPRU-202ENST00000373779 BICDL2A1A5D9 508 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 POSTNQ15063 836 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 SEPT7Q16181 437 aaKnown RBP19.72■□□□□ 0.75
PTPRU-202ENST00000373779 C19orf44Q9H6X5 657 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 TTF2Q9UNY4 1162 aaKnown RBP19.72■□□□□ 0.75
PTPRU-202ENST00000373779 LTKP29376 864 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 ZAP70P43403 619 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 TUBB2AQ13885 445 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 POLA2Q14181 598 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 NBPF11Q86T75 865 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 TUBB2BQ9BVA1 445 aa19.72■□□□□ 0.75
PTPRU-202ENST00000373779 ZNF215Q9UL58 517 aaPredicted RBP19.72■□□□□ 0.75
PTPRU-202ENST00000373779 NEFHP12036 1026 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 TCERG1LQ5VWI1 586 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 PHACTR2O75167 634 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 PNOCQ13519 176 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 NAPGQ99747 312 aaPredicted RBP19.71■□□□□ 0.75
PTPRU-202ENST00000373779 CCDC113Q9H0I3 377 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 PRR36Q9H6K5 1346 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 PCDHA7Q9UN72 937 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 PNPLA6Q8IY17 1366 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 MTX1Q13505 466 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 MYL10Q9BUA6 226 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 ARMT1Q9H993 441 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 OPA1O60313 960 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 HSPD1P10809 573 aaKnown RBP19.71■□□□□ 0.75
PTPRU-202ENST00000373779 TRIM14Q14142 442 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 DYDC1Q8WWB3 177 aa19.71■□□□□ 0.75
PTPRU-202ENST00000373779 ADGRB3O60242 1522 aa19.7■□□□□ 0.74
PTPRU-202ENST00000373779 GSTO1P78417 241 aa19.7■□□□□ 0.74
PTPRU-202ENST00000373779 ORAI2Q96SN7 254 aa19.7■□□□□ 0.74
PTPRU-202ENST00000373779 MMRN2Q9H8L6 949 aa19.7■□□□□ 0.74
PTPRU-202ENST00000373779 ZBTB9Q96C00 473 aa19.7■□□□□ 0.74
PTPRU-202ENST00000373779 A1BGP04217 495 aa19.7■□□□□ 0.74
PTPRU-202ENST00000373779 NAPAP54920 295 aa19.7■□□□□ 0.74
PTPRU-202ENST00000373779 PUM3Q15397 648 aaKnown RBP19.7■□□□□ 0.74
PTPRU-202ENST00000373779 IFI16Q16666 785 aaKnown RBP19.7■□□□□ 0.74
PTPRU-202ENST00000373779 PROSER3Q2NL68 480 aa19.7■□□□□ 0.74
PTPRU-202ENST00000373779 DTHD1Q6ZMT9 781 aa19.7■□□□□ 0.74
PTPRU-202ENST00000373779 NIP7Q9Y221 180 aaKnown RBP eCLIP19.7■□□□□ 0.74
PTPRU-202ENST00000373779 CCDC122Q5T0U0 273 aa19.69■□□□□ 0.74
PTPRU-202ENST00000373779 ZNF589Q86UQ0 364 aaPredicted RBP19.69■□□□□ 0.74
PTPRU-202ENST00000373779 PDLIM2Q96JY6 352 aa19.69■□□□□ 0.74
PTPRU-202ENST00000373779 COPRSQ9NQ92 184 aa19.69■□□□□ 0.74
PTPRU-202ENST00000373779 CYP26C1Q6V0L0 522 aa19.69■□□□□ 0.74
PTPRU-202ENST00000373779 VPS16Q9H269 839 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms