RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 ADRA2BP18089 450 aa20.95■□□□□ 0.94
CTSA-204ENST00000372484 GUCY1B3Q02153 619 aa20.95■□□□□ 0.94
CTSA-204ENST00000372484 TRIM44Q96DX7 344 aaPredicted RBP20.95■□□□□ 0.94
CTSA-204ENST00000372484 TIAM2Q8IVF5 1701 aa20.95■□□□□ 0.94
CTSA-204ENST00000372484 CACNA1SQ13698 1873 aa20.94■□□□□ 0.94
CTSA-204ENST00000372484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.94■□□□□ 0.94
CTSA-204ENST00000372484 KDM4AO75164 1064 aa20.94■□□□□ 0.94
CTSA-204ENST00000372484 CNBD1Q8NA66 436 aa20.94■□□□□ 0.94
CTSA-204ENST00000372484 IGDCC4Q8TDY8 1250 aa20.94■□□□□ 0.94
CTSA-204ENST00000372484 PPP1R9BQ96SB3 815 aa20.94■□□□□ 0.94
CTSA-204ENST00000372484 KRT23Q9C075 422 aa20.94■□□□□ 0.94
CTSA-204ENST00000372484 HIBADHP31937 336 aaKnown RBP20.93■□□□□ 0.94
CTSA-204ENST00000372484 TFCP2L1Q9NZI6 479 aa20.93■□□□□ 0.94
CTSA-204ENST00000372484 ZSWIM5Q9P217 1185 aa20.93■□□□□ 0.94
CTSA-204ENST00000372484 ORC3Q9UBD5 711 aaPredicted RBP20.93■□□□□ 0.94
CTSA-204ENST00000372484 METAP2P50579 478 aaKnown RBP eCLIP20.93■□□□□ 0.94
CTSA-204ENST00000372484 TMEM67Q5HYA8 995 aa20.93■□□□□ 0.94
CTSA-204ENST00000372484 APOA5Q6Q788 366 aa20.93■□□□□ 0.94
CTSA-204ENST00000372484 NFXL1Q6ZNB6 911 aa20.93■□□□□ 0.94
CTSA-204ENST00000372484 UBR3Q6ZT12 1888 aa20.92■□□□□ 0.94
CTSA-204ENST00000372484 SDR42E1Q8WUS8 393 aa20.92■□□□□ 0.94
CTSA-204ENST00000372484 STAG1Q8WVM7 1258 aa20.92■□□□□ 0.94
CTSA-204ENST00000372484 C8orf76Q96K31 380 aa20.92■□□□□ 0.94
CTSA-204ENST00000372484 SENP2Q9HC62 589 aa20.92■□□□□ 0.94
CTSA-204ENST00000372484 TOMM22Q9NS69 142 aa20.92■□□□□ 0.94
CTSA-204ENST00000372484 TACC3Q9Y6A5 838 aa20.92■□□□□ 0.94
CTSA-204ENST00000372484 RRP12Q5JTH9 1297 aaKnown RBP20.92■□□□□ 0.94
CTSA-204ENST00000372484 LY9Q9HBG7 655 aa20.92■□□□□ 0.94
CTSA-204ENST00000372484 IFIT3O14879 490 aaKnown RBP20.91■□□□□ 0.94
CTSA-204ENST00000372484 LIG1P18858 919 aa20.91■□□□□ 0.94
CTSA-204ENST00000372484 ADD1P35611 737 aaKnown RBP20.91■□□□□ 0.94
CTSA-204ENST00000372484 CEBPZQ03701 1054 aaKnown RBP20.91■□□□□ 0.94
CTSA-204ENST00000372484 GIMAP6Q6P9H5 292 aa20.91■□□□□ 0.94
CTSA-204ENST00000372484 SGMS1Q86VZ5 419 aa20.91■□□□□ 0.94
CTSA-204ENST00000372484 RIOK1Q9BRS2 568 aaKnown RBP20.91■□□□□ 0.94
CTSA-204ENST00000372484 PDS5AQ29RF7 1337 aaKnown RBP20.91■□□□□ 0.94
CTSA-204ENST00000372484 RXRAP19793 462 aa20.9■□□□□ 0.94
CTSA-204ENST00000372484 LIFRP42702 1097 aa20.9■□□□□ 0.94
CTSA-204ENST00000372484 MICU3Q86XE3 530 aa20.9■□□□□ 0.94
CTSA-204ENST00000372484 ZBTB43O43298 467 aa20.9■□□□□ 0.94
CTSA-204ENST00000372484 PPARAQ07869 468 aa20.9■□□□□ 0.94
CTSA-204ENST00000372484 GRAPQ13588 217 aa20.9■□□□□ 0.94
CTSA-204ENST00000372484 ATL3Q6DD88 541 aa20.9■□□□□ 0.94
CTSA-204ENST00000372484 STK11IPQ8N1F8 1099 aa20.9■□□□□ 0.94
CTSA-204ENST00000372484 KLHL34Q8N239 644 aa20.9■□□□□ 0.94
CTSA-204ENST00000372484 GRAPLQ8TC17 118 aaPredicted RBP20.9■□□□□ 0.94
CTSA-204ENST00000372484 PGBD1Q96JS3 809 aa20.9■□□□□ 0.94
CTSA-204ENST00000372484 ZNF396Q96N95 335 aaPredicted RBP20.9■□□□□ 0.94
CTSA-204ENST00000372484 RNF41Q9H4P4 317 aaPredicted RBP20.9■□□□□ 0.94
CTSA-204ENST00000372484 ANKIB1Q9P2G1 1089 aa20.9■□□□□ 0.94
CTSA-204ENST00000372484 CDKL5O76039 1030 aa20.89■□□□□ 0.94
CTSA-204ENST00000372484 SLC27A3Q5K4L6 730 aa20.89■□□□□ 0.94
CTSA-204ENST00000372484 CPLX2Q6PUV4 134 aaKnown RBP20.89■□□□□ 0.94
CTSA-204ENST00000372484 FBXO18Q8NFZ0 1043 aa20.89■□□□□ 0.94
CTSA-204ENST00000372484 BICD2Q8TD16 824 aa20.89■□□□□ 0.94
CTSA-204ENST00000372484 ZNF384Q8TF68 577 aa20.89■□□□□ 0.94
CTSA-204ENST00000372484 BRWD3Q6RI45 1802 aa20.89■□□□□ 0.93
CTSA-204ENST00000372484 MINDY4BA8MYZ0 360 aa20.89■□□□□ 0.93
CTSA-204ENST00000372484 DYNLL1P63167 89 aaKnown RBP20.89■□□□□ 0.93
CTSA-204ENST00000372484 CHAF1AQ13111 956 aaPredicted RBP20.89■□□□□ 0.93
CTSA-204ENST00000372484 SART3Q15020 963 aaKnown RBP20.89■□□□□ 0.93
CTSA-204ENST00000372484 OTUD7BQ6GQQ9 843 aa20.89■□□□□ 0.93
CTSA-204ENST00000372484 KRT27Q7Z3Y8 459 aa20.89■□□□□ 0.93
CTSA-204ENST00000372484 TXNRD3Q86VQ6 643 aa20.89■□□□□ 0.93
CTSA-204ENST00000372484 SLC12A7Q9Y666 1083 aa20.89■□□□□ 0.93
CTSA-204ENST00000372484 CCDC69A6NI79 296 aa20.88■□□□□ 0.93
CTSA-204ENST00000372484 TRIM37O94972 964 aa20.88■□□□□ 0.93
CTSA-204ENST00000372484 GYS1P13807 737 aa20.88■□□□□ 0.93
CTSA-204ENST00000372484 PRR5LQ6MZQ0 368 aa20.88■□□□□ 0.93
CTSA-204ENST00000372484 ILDR1Q86SU0 546 aaPredicted RBP20.88■□□□□ 0.93
CTSA-204ENST00000372484 CCDC144CPQ8IYA2 1237 aa20.88■□□□□ 0.93
CTSA-204ENST00000372484 NSUN4Q96CB9 384 aaKnown RBP20.88■□□□□ 0.93
CTSA-204ENST00000372484 FTOQ9C0B1 505 aaKnown RBP eCLIP20.88■□□□□ 0.93
CTSA-204ENST00000372484 NUP62CLQ9H1M0 184 aa20.88■□□□□ 0.93
CTSA-204ENST00000372484 DACT1Q9NYF0 836 aa20.88■□□□□ 0.93
CTSA-204ENST00000372484 BAZ2AQ9UIF9 1905 aaKnown RBP20.88■□□□□ 0.93
CTSA-204ENST00000372484 CDC27P30260 824 aa20.87■□□□□ 0.93
CTSA-204ENST00000372484 MECOMQ03112 1051 aa20.87■□□□□ 0.93
CTSA-204ENST00000372484 USP28Q96RU2 1077 aa20.87■□□□□ 0.93
CTSA-204ENST00000372484 MYL10Q9BUA6 226 aa20.87■□□□□ 0.93
CTSA-204ENST00000372484 RCOR1Q9UKL0 485 aa20.87■□□□□ 0.93
CTSA-204ENST00000372484 GOLGA8AA7E2F4 631 aa20.87■□□□□ 0.93
CTSA-204ENST00000372484 ZKSCAN3Q9BRR0 538 aa20.87■□□□□ 0.93
CTSA-204ENST00000372484 CCDC88AQ3V6T2 1871 aa20.87■□□□□ 0.93
CTSA-204ENST00000372484 ERICH2A1L162 156 aa20.86■□□□□ 0.93
CTSA-204ENST00000372484 SYNE3Q6ZMZ3 975 aa20.86■□□□□ 0.93
CTSA-204ENST00000372484 RPGRQ92834 1020 aaKnown RBP20.86■□□□□ 0.93
CTSA-204ENST00000372484 DDX19AQ9NUU7 478 aaKnown RBP20.86■□□□□ 0.93
CTSA-204ENST00000372484 ANAPC4Q9UJX5 808 aa20.86■□□□□ 0.93
CTSA-204ENST00000372484 CAMK4Q16566 473 aa20.86■□□□□ 0.93
CTSA-204ENST00000372484 PDLIM2Q96JY6 352 aa20.86■□□□□ 0.93
CTSA-204ENST00000372484 FUCA2Q9BTY2 467 aa20.86■□□□□ 0.93
CTSA-204ENST00000372484 BRIP1Q9BX63 1249 aa20.86■□□□□ 0.93
CTSA-204ENST00000372484 RRAGDQ9NQL2 400 aaPredicted RBP20.86■□□□□ 0.93
CTSA-204ENST00000372484 GJB4Q9NTQ9 266 aa20.86■□□□□ 0.93
CTSA-204ENST00000372484 IRS2Q9Y4H2 1338 aa20.85■□□□□ 0.93
CTSA-204ENST00000372484 PRDX5P30044 214 aa20.85■□□□□ 0.93
CTSA-204ENST00000372484 ST5P78524 1137 aa20.85■□□□□ 0.93
CTSA-204ENST00000372484 WTAPQ15007 396 aa20.85■□□□□ 0.93
CTSA-204ENST00000372484 MAP3K11Q16584 847 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms