RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 HHIPQ96QV1 700 aa7.15□□□□□ -1.26
ECHDC1-204ENST00000368292 KIAA1522Q9P206 1035 aaPredicted RBP7.15□□□□□ -1.26
ECHDC1-204ENST00000368292 SPATA31A6Q5VVP1 1343 aa7.15□□□□□ -1.26
ECHDC1-204ENST00000368292 TNRQ92752 1358 aa7.15□□□□□ -1.26
ECHDC1-204ENST00000368292 ATP7AQ04656 1500 aa7.15□□□□□ -1.27
ECHDC1-204ENST00000368292 KDM5DQ9BY66 1539 aa7.15□□□□□ -1.27
ECHDC1-204ENST00000368292 UGGT1Q9NYU2 1555 aa7.15□□□□□ -1.27
ECHDC1-204ENST00000368292 TREHO43280 583 aa7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 SMNDC1O75940 238 aaKnown RBP eCLIP7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 AFF2P51816 1311 aa7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 TAGLNQ01995 201 aaKnown RBP7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 MEX3CQ5U5Q3 659 aaKnown RBP7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 FGD6Q6ZV73 1430 aa7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 FBXO33Q7Z6M2 555 aa7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 WFDC8Q8IUA0 241 aa7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 SAMD9LQ8IVG5 1584 aa7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 GALNT12Q8IXK2 581 aa7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 IL22RA1Q8N6P7 574 aa7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 GIPC2Q8TF65 315 aa7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 OSMRQ99650 979 aa7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 ZKSCAN3Q9BRR0 538 aa7.14□□□□□ -1.27
ECHDC1-204ENST00000368292 DIP2AQ14689 1571 aa7.13□□□□□ -1.27
ECHDC1-204ENST00000368292 LRRC9Q6ZRR7 1453 aa7.13□□□□□ -1.27
ECHDC1-204ENST00000368292 BCL9LQ86UU0 1499 aa7.13□□□□□ -1.27
ECHDC1-204ENST00000368292 TMEM94Q12767 1356 aa7.13□□□□□ -1.27
ECHDC1-204ENST00000368292 SPDYE3A6NKU9 549 aa7.13□□□□□ -1.27
ECHDC1-204ENST00000368292 EIF1AYO14602 144 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-204ENST00000368292 CPNE3O75131 537 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-204ENST00000368292 EDN3P14138 238 aa7.13□□□□□ -1.27
ECHDC1-204ENST00000368292 ZNF326Q5BKZ1 582 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-204ENST00000368292 ZSCAN29Q8IWY8 852 aaPredicted RBP7.13□□□□□ -1.27
ECHDC1-204ENST00000368292 PDE2AO00408 941 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-204ENST00000368292 DEAF1O75398 565 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-204ENST00000368292 SPATA31C1P0DKV0 1188 aa7.12□□□□□ -1.27
ECHDC1-204ENST00000368292 TRIM28Q13263 835 aaKnown RBP7.12□□□□□ -1.27
ECHDC1-204ENST00000368292 FMR1NBQ8N0W7 255 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-204ENST00000368292 CACTIN-AS1Q8N1I8 211 aa7.12□□□□□ -1.27
ECHDC1-204ENST00000368292 TMEM102Q8N9M5 508 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-204ENST00000368292 NXPE3Q969Y0 559 aa7.12□□□□□ -1.27
ECHDC1-204ENST00000368292 CSRNP1Q96S65 589 aa7.12□□□□□ -1.27
ECHDC1-204ENST00000368292 LACRTQ9GZZ8 138 aa7.12□□□□□ -1.27
ECHDC1-204ENST00000368292 ADAM19Q9H013 955 aa7.12□□□□□ -1.27
ECHDC1-204ENST00000368292 DNAJC25Q9H1X3 360 aa7.12□□□□□ -1.27
ECHDC1-204ENST00000368292 TIAM1Q13009 1591 aa7.12□□□□□ -1.27
ECHDC1-204ENST00000368292 FAM135AQ9P2D6 1515 aa7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 PZPP20742 1482 aa7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 PRXQ9BXM0 1461 aa7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 A0A1W2PP55 124 aa7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 PLCB3Q01970 1234 aa7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 GRIK4Q16099 956 aa7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 PLA2G4EQ3MJ16 856 aa7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 PRRT3Q5FWE3 981 aa7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 DTWD1Q8N5C7 304 aa7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 MRRFQ96E11 262 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 SH2B1Q9NRF2 756 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 USP35Q9P2H5 1018 aa7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 ADGBQ8N7X0 1667 aa7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 NWD1Q149M9 1564 aa7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 NLRP1Q9C000 1473 aa7.11□□□□□ -1.27
ECHDC1-204ENST00000368292 AHDC1Q5TGY3 1603 aaPredicted RBP7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 PREX2Q70Z35 1606 aa7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 TM4SF5O14894 197 aa7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 EPHA1P21709 976 aa7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 CDC27P30260 824 aa7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 RBM6P78332 1123 aaKnown RBP7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 FMR1Q06787 632 aaKnown RBP eCLIP7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 COL19A1Q14993 1142 aa7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 SETDB1Q15047 1291 aa7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 FBXO11Q86XK2 927 aa7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 THEMISQ8N1K5 641 aaPredicted RBP7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 CCDC74AQ96AQ1 378 aa7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 BHLHE41Q9C0J9 482 aaPredicted RBP7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 IGSF5Q9NSI5 407 aa7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 PPME1Q9Y570 386 aa7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 INO80Q9ULG1 1556 aaPredicted RBP7.1□□□□□ -1.27
ECHDC1-204ENST00000368292 C1QTNF9BB2RNN3 333 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 LINC01387J3KSC0 135 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 CLSTN1O94985 981 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 ELNP15502 786 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 SELPP16109 830 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 PTPRAP18433 802 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 CHRNA4P43681 627 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 RAC1P63000 192 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 KIAA0319Q5VV43 1072 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 GGT6Q6P531 493 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 CD163Q86VB7 1156 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 TICAM2Q86XR7 235 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 TCF12Q99081 682 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 NPHS2Q9NP85 383 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 SOX13Q9UN79 622 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 A2MP01023 1474 aa7.09□□□□□ -1.27
ECHDC1-204ENST00000368292 METTL12A8MUP2 240 aa7.08□□□□□ -1.28
ECHDC1-204ENST00000368292 P4HBP07237 508 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-204ENST00000368292 ENOX2Q16206 610 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-204ENST00000368292 SHISA2Q6UWI4 295 aa7.08□□□□□ -1.28
ECHDC1-204ENST00000368292 CCNJLQ8IV13 435 aa7.08□□□□□ -1.28
ECHDC1-204ENST00000368292 EPS8L3Q8TE67 593 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-204ENST00000368292 MUC3BQ9H195 1237 aa7.08□□□□□ -1.28
ECHDC1-204ENST00000368292 SCAF11Q99590 1463 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-204ENST00000368292 MIA2Q96PC5 1412 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms