RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CIDEBQ9UHD4 219 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 RTEL1-TNFRSF6BF6WH68 1400 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 TPD52L1Q16890 204 aaPredicted RBP4.22□□□□□ -1.73
SYNE1-207ENST00000367255 TEKT1Q969V4 418 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 XRCC6P12956 609 aaKnown RBP eCLIP4.22□□□□□ -1.73
SYNE1-207ENST00000367255 RSPH3Q86UC2 560 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 HSPA13P48723 471 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 TEX9Q8N6V9 391 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 RAB3GAP1Q15042 981 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 NEK11Q8NG66 645 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 THUMPD2Q9BTF0 503 aaKnown RBP4.22□□□□□ -1.73
SYNE1-207ENST00000367255 CCDC162PA2VCL2 907 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 H0YC42 278 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 NDUFAB1O14561 156 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 TPD52P55327 224 aaPredicted RBP4.22□□□□□ -1.73
SYNE1-207ENST00000367255 TNNC1P63316 161 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 RASSF7Q02833 373 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 TTC31Q49AM3 519 aaPredicted RBP4.22□□□□□ -1.73
SYNE1-207ENST00000367255 TOGARAM2Q6ZUX3 1019 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 HMOX1P09601 288 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 SKIP12755 728 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 AFAP1L2Q8N4X5 818 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 SERPINB8P50452 374 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 MRPL11Q9Y3B7 192 aaKnown RBP4.22□□□□□ -1.73
SYNE1-207ENST00000367255 IPO5O00410 1097 aaKnown RBP4.22□□□□□ -1.73
SYNE1-207ENST00000367255 OAS2P29728 719 aaKnown RBP4.22□□□□□ -1.73
SYNE1-207ENST00000367255 NFE2L2Q16236 605 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 SYNDIG1Q9H7V2 258 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 ZNF148Q9UQR1 794 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 NOL3O60936 208 aaKnown RBP4.22□□□□□ -1.73
SYNE1-207ENST00000367255 CSRNP2Q9H175 543 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 ZSWIM4Q9H7M6 989 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 POTEMA6NI47 508 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 THAP12O43422 761 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 CASP14P31944 242 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 CYLC1P35663 651 aaPredicted RBP4.22□□□□□ -1.73
SYNE1-207ENST00000367255 CUL1Q13616 776 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 CCDC144BQ3MJ40 725 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 POTEHQ6S545 545 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 POTEGQ6S5H5 508 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 DAAM2Q86T65 1068 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 FRMD4BQ9Y2L6 1034 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 KRT16P08779 473 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 C8orf34Q49A92 452 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 PPP1R21Q6ZMI0 780 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 CTTNBP2NLQ9P2B4 639 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 SOS2Q07890 1332 aaPredicted RBP4.22□□□□□ -1.73
SYNE1-207ENST00000367255 NCAPH2Q6IBW4 605 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 TMTC1Q8IUR5 882 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 SMARCAL1Q9NZC9 954 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 PCDHGA3Q9Y5H0 932 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 CLASRPQ8N2M8 674 aaKnown RBP4.22□□□□□ -1.73
SYNE1-207ENST00000367255 ANKRD13CQ8N6S4 541 aa4.22□□□□□ -1.73
SYNE1-207ENST00000367255 BLMP54132 1417 aaPredicted RBP4.22□□□□□ -1.73
SYNE1-207ENST00000367255 LAD1O00515 517 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 LRCH2Q5VUJ6 765 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 MAGEC3Q8TD91 643 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 ERBINQ96RT1 1412 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 ANO9A1A5B4 782 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 CCDC14Q49A88 953 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 TEDDM1Q5T9Z0 273 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 CHCHD4Q8N4Q1 142 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 ECT2Q9H8V3 914 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 ARHGAP5Q13017 1502 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 ACTN4O43707 911 aaKnown RBP4.21□□□□□ -1.73
SYNE1-207ENST00000367255 DENND2CQ68D51 928 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 ATRIPQ8WXE1 791 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 POLR2EP19388 210 aaKnown RBP4.21□□□□□ -1.73
SYNE1-207ENST00000367255 DONSONQ9NYP3 566 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 NEDD4P46934 1319 aa4.21□□□□□ -1.73
SYNE1-207ENST00000367255 LGSNQ5TDP6 509 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 TANGO6Q9C0B7 1094 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 SERPINA10Q9UK55 444 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 STX17P56962 302 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 SARM1Q6SZW1 724 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 ATICP31939 592 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 TRAPPC10P48553 1259 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 GFPT2O94808 682 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 ACADVLP49748 655 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 A0A1W2PQ27 194 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 A0A1W2PQ64 194 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 A0A1W2PQD8 194 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 GMNNO75496 209 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 KIFAP3Q92845 792 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 TXLNGQ9NUQ3 528 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 GNL3LQ9NVN8 582 aaKnown RBP4.21□□□□□ -1.74
SYNE1-207ENST00000367255 A0A087WUV0 522 aaPredicted RBP4.21□□□□□ -1.74
SYNE1-207ENST00000367255 KRT4P19013 534 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 RWDD2BP57060 319 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 PKD2Q13563 968 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 ODF2LQ9ULJ1 636 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 RPAP1Q9BWH6 1393 aaPredicted RBP4.21□□□□□ -1.74
SYNE1-207ENST00000367255 GKAP1Q5VSY0 366 aaPredicted RBP4.21□□□□□ -1.74
SYNE1-207ENST00000367255 NBPF15Q8N660 670 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 TBC1D7Q9P0N9 293 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 CD109Q6YHK3 1445 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 IQCA1LA6NCM1 817 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 TUBA3CQ13748 450 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 FOXR2Q6PJQ5 311 aa4.21□□□□□ -1.74
SYNE1-207ENST00000367255 CCDC169A6NNP5 214 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms