RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 FBXO18Q8NFZ0 1043 aa16.28■□□□□ 0.2
VAMP2-201ENST00000316509 BRIP1Q9BX63 1249 aa16.28■□□□□ 0.2
VAMP2-201ENST00000316509 GPHNQ9NQX3 736 aaPredicted RBP16.28■□□□□ 0.2
VAMP2-201ENST00000316509 LEMD3Q9Y2U8 911 aa16.28■□□□□ 0.2
VAMP2-201ENST00000316509 C4BP0C0L5 1744 aa16.28■□□□□ 0.2
VAMP2-201ENST00000316509 TAF1LQ8IZX4 1826 aa16.28■□□□□ 0.2
VAMP2-201ENST00000316509 A0A1B0GUL6 1792 aa16.27■□□□□ 0.2
VAMP2-201ENST00000316509 DTNBO60941 627 aa16.27■□□□□ 0.2
VAMP2-201ENST00000316509 PPP2R5BQ15173 497 aa16.27■□□□□ 0.2
VAMP2-201ENST00000316509 FAM173BQ6P4H8 233 aa16.27■□□□□ 0.2
VAMP2-201ENST00000316509 FUCA2Q9BTY2 467 aa16.27■□□□□ 0.2
VAMP2-201ENST00000316509 NUP62CLQ9H1M0 184 aa16.27■□□□□ 0.2
VAMP2-201ENST00000316509 ABCF2Q9UG63 623 aa16.27■□□□□ 0.2
VAMP2-201ENST00000316509 ZBTB43O43298 467 aa16.27■□□□□ 0.19
VAMP2-201ENST00000316509 CCDC192P0DO97 292 aa16.27■□□□□ 0.19
VAMP2-201ENST00000316509 TMEM67Q5HYA8 995 aa16.27■□□□□ 0.19
VAMP2-201ENST00000316509 SPTY2D1Q68D10 685 aaPredicted RBP16.27■□□□□ 0.19
VAMP2-201ENST00000316509 APOA5Q6Q788 366 aa16.27■□□□□ 0.19
VAMP2-201ENST00000316509 FAM196AQ6ZSG2 479 aa16.27■□□□□ 0.19
VAMP2-201ENST00000316509 LY9Q9HBG7 655 aa16.27■□□□□ 0.19
VAMP2-201ENST00000316509 ZSWIM5Q9P217 1185 aa16.27■□□□□ 0.19
VAMP2-201ENST00000316509 SBF2Q86WG5 1849 aa16.26■□□□□ 0.19
VAMP2-201ENST00000316509 ERICH2A1L162 156 aa16.26■□□□□ 0.19
VAMP2-201ENST00000316509 GRAPQ13588 217 aa16.26■□□□□ 0.19
VAMP2-201ENST00000316509 MAP3K11Q16584 847 aa16.26■□□□□ 0.19
VAMP2-201ENST00000316509 GRAPLQ8TC17 118 aaPredicted RBP16.26■□□□□ 0.19
VAMP2-201ENST00000316509 WASF1Q92558 559 aa16.26■□□□□ 0.19
VAMP2-201ENST00000316509 RIOK1Q9BRS2 568 aaKnown RBP16.26■□□□□ 0.19
VAMP2-201ENST00000316509 MYO5AQ9Y4I1 1855 aaKnown RBP16.26■□□□□ 0.19
VAMP2-201ENST00000316509 NEDD4P46934 1319 aa16.26■□□□□ 0.19
VAMP2-201ENST00000316509 STK36Q9NRP7 1315 aa16.26■□□□□ 0.19
VAMP2-201ENST00000316509 CCDC69A6NI79 296 aa16.26■□□□□ 0.19
VAMP2-201ENST00000316509 IFIT3O14879 490 aaKnown RBP16.26■□□□□ 0.19
VAMP2-201ENST00000316509 NFXL1Q6ZNB6 911 aa16.26■□□□□ 0.19
VAMP2-201ENST00000316509 RBM43Q6ZSC3 357 aaKnown RBP16.26■□□□□ 0.19
VAMP2-201ENST00000316509 C15orf52Q6ZUT6 534 aaKnown RBP16.26■□□□□ 0.19
VAMP2-201ENST00000316509 RTEL1Q9NZ71 1219 aa16.26■□□□□ 0.19
VAMP2-201ENST00000316509 SLC12A7Q9Y666 1083 aa16.26■□□□□ 0.19
VAMP2-201ENST00000316509 CCDC196A0A1B0GTZ2 297 aa16.25■□□□□ 0.19
VAMP2-201ENST00000316509 NPHP1O15259 732 aa16.25■□□□□ 0.19
VAMP2-201ENST00000316509 CTAGE5O15320 804 aa16.25■□□□□ 0.19
VAMP2-201ENST00000316509 PPARAQ07869 468 aa16.25■□□□□ 0.19
VAMP2-201ENST00000316509 CLSTN2Q9H4D0 955 aa16.25■□□□□ 0.19
VAMP2-201ENST00000316509 PRKAB2O43741 272 aa16.24■□□□□ 0.19
VAMP2-201ENST00000316509 CAVIN2O95810 425 aa16.24■□□□□ 0.19
VAMP2-201ENST00000316509 NFIXQ14938 502 aa16.24■□□□□ 0.19
VAMP2-201ENST00000316509 PGBD1Q96JS3 809 aa16.24■□□□□ 0.19
VAMP2-201ENST00000316509 COL4A1P02462 1669 aa16.24■□□□□ 0.19
VAMP2-201ENST00000316509 ESPNB1AK53 854 aa16.24■□□□□ 0.19
VAMP2-201ENST00000316509 KDM4AO75164 1064 aa16.24■□□□□ 0.19
VAMP2-201ENST00000316509 FGRP09769 529 aa16.24■□□□□ 0.19
VAMP2-201ENST00000316509 CTDSPL2Q05D32 466 aa16.24■□□□□ 0.19
VAMP2-201ENST00000316509 CNBD1Q8NA66 436 aa16.24■□□□□ 0.19
VAMP2-201ENST00000316509 BICD2Q8TD16 824 aa16.24■□□□□ 0.19
VAMP2-201ENST00000316509 ESR2Q92731 530 aa16.24■□□□□ 0.19
VAMP2-201ENST00000316509 QTRT2Q9H974 415 aaKnown RBP16.24■□□□□ 0.19
VAMP2-201ENST00000316509 YEATS4O95619 227 aa16.23■□□□□ 0.19
VAMP2-201ENST00000316509 LIG1P18858 919 aa16.23■□□□□ 0.19
VAMP2-201ENST00000316509 MIGA1Q8NAN2 632 aa16.23■□□□□ 0.19
VAMP2-201ENST00000316509 FBXO41Q8TF61 875 aa16.23■□□□□ 0.19
VAMP2-201ENST00000316509 NSUN4Q96CB9 384 aaKnown RBP16.23■□□□□ 0.19
VAMP2-201ENST00000316509 TNMDQ9H2S6 317 aa16.23■□□□□ 0.19
VAMP2-201ENST00000316509 DACT1Q9NYF0 836 aa16.23■□□□□ 0.19
VAMP2-201ENST00000316509 GOLGA8AA7E2F4 631 aa16.23■□□□□ 0.19
VAMP2-201ENST00000316509 CLCN1P35523 988 aa16.23■□□□□ 0.19
VAMP2-201ENST00000316509 IARSP41252 1262 aaKnown RBP16.23■□□□□ 0.19
VAMP2-201ENST00000316509 WTAPQ15007 396 aa16.23■□□□□ 0.19
VAMP2-201ENST00000316509 FAM182BQ5T319 152 aa16.23■□□□□ 0.19
VAMP2-201ENST00000316509 KCNG4Q8TDN1 519 aa16.23■□□□□ 0.19
VAMP2-201ENST00000316509 ATP8A2Q9NTI2 1148 aa16.23■□□□□ 0.19
VAMP2-201ENST00000316509 POLR3EQ9NVU0 708 aa16.23■□□□□ 0.19
VAMP2-201ENST00000316509 COL1A1P02452 1464 aaPredicted RBP16.23■□□□□ 0.19
VAMP2-201ENST00000316509 CASZ1Q86V15 1759 aa16.22■□□□□ 0.19
VAMP2-201ENST00000316509 IRS2Q9Y4H2 1338 aa16.22■□□□□ 0.19
VAMP2-201ENST00000316509 IFNAR1P17181 557 aa16.22■□□□□ 0.19
VAMP2-201ENST00000316509 NTRK3Q16288 839 aa16.22■□□□□ 0.19
VAMP2-201ENST00000316509 SMIM5Q71RC9 77 aa16.22■□□□□ 0.19
VAMP2-201ENST00000316509 WDR66Q8TBY9 1149 aa16.22■□□□□ 0.19
VAMP2-201ENST00000316509 USP28Q96RU2 1077 aa16.22■□□□□ 0.19
VAMP2-201ENST00000316509 IQSEC3Q9UPP2 1182 aaPredicted RBP16.22■□□□□ 0.19
VAMP2-201ENST00000316509 A0A1W2PQ27 194 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 A0A1W2PQ64 194 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 A0A1W2PQD8 194 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 ST5P78524 1137 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 SSRP1Q08945 709 aaKnown RBP16.21■□□□□ 0.19
VAMP2-201ENST00000316509 RNF214Q8ND24 703 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 ALG1Q9BT22 464 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 CRNKL1Q9BZJ0 848 aaKnown RBP16.21■□□□□ 0.19
VAMP2-201ENST00000316509 LRRC4BQ9NT99 713 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 XDHP47989 1333 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 C4AP0C0L4 1744 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.21■□□□□ 0.19
VAMP2-201ENST00000316509 SLC3A2P08195 630 aaKnown RBP16.21■□□□□ 0.19
VAMP2-201ENST00000316509 TRIM29Q14134 588 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 ADALQ6DHV7 355 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 ADGRA1Q86SQ6 560 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 ZSCAN30Q86W11 494 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 AMIGO3Q86WK7 504 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 CERS3Q8IU89 383 aa16.21■□□□□ 0.19
VAMP2-201ENST00000316509 CCDC39Q9UFE4 941 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms