RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 KCNK17Q96T54 332 aa11.81□□□□□ -0.52
CNOT9-202ENST00000295701 CENPFP49454 3210 aa11.81□□□□□ -0.52
CNOT9-202ENST00000295701 MKI67P46013 3256 aaKnown RBP11.8□□□□□ -0.52
CNOT9-202ENST00000295701 FKTNO75072 461 aa11.8□□□□□ -0.52
CNOT9-202ENST00000295701 GJA5P36382 358 aa11.8□□□□□ -0.52
CNOT9-202ENST00000295701 MMP14P50281 582 aa11.8□□□□□ -0.52
CNOT9-202ENST00000295701 SREBF2Q12772 1141 aa11.8□□□□□ -0.52
CNOT9-202ENST00000295701 PKN2Q16513 984 aaKnown RBP11.8□□□□□ -0.52
CNOT9-202ENST00000295701 MTMR14Q8NCE2 650 aa11.8□□□□□ -0.52
CNOT9-202ENST00000295701 PUS3Q9BZE2 481 aaKnown RBP11.8□□□□□ -0.52
CNOT9-202ENST00000295701 VEZTQ9HBM0 779 aa11.8□□□□□ -0.52
CNOT9-202ENST00000295701 MRS2Q9HD23 443 aa11.8□□□□□ -0.52
CNOT9-202ENST00000295701 HTTP42858 3142 aa11.79□□□□□ -0.52
CNOT9-202ENST00000295701 IGF2BP3O00425 579 aaKnown RBP eCLIP11.79□□□□□ -0.52
CNOT9-202ENST00000295701 USP2O75604 605 aaPredicted RBP11.79□□□□□ -0.52
CNOT9-202ENST00000295701 MAP3K11Q16584 847 aa11.79□□□□□ -0.52
CNOT9-202ENST00000295701 FBXO46Q6PJ61 603 aaPredicted RBP11.79□□□□□ -0.52
CNOT9-202ENST00000295701 LDHAL6AQ6ZMR3 332 aa11.79□□□□□ -0.52
CNOT9-202ENST00000295701 WDR63Q8IWG1 891 aa11.79□□□□□ -0.52
CNOT9-202ENST00000295701 WNK4Q96J92 1243 aa11.79□□□□□ -0.52
CNOT9-202ENST00000295701 KIAA0100Q14667 2235 aaKnown RBP11.79□□□□□ -0.52
CNOT9-202ENST00000295701 GRM8O00222 908 aa11.78□□□□□ -0.52
CNOT9-202ENST00000295701 GYG1P46976 350 aa11.78□□□□□ -0.52
CNOT9-202ENST00000295701 RBM5P52756 815 aaKnown RBP eCLIP11.78□□□□□ -0.52
CNOT9-202ENST00000295701 CAP1Q01518 475 aa11.78□□□□□ -0.52
CNOT9-202ENST00000295701 GRIK5Q16478 980 aa11.78□□□□□ -0.52
CNOT9-202ENST00000295701 CCDC57Q2TAC2 916 aa11.78□□□□□ -0.52
CNOT9-202ENST00000295701 NOM1Q5C9Z4 860 aaKnown RBP11.78□□□□□ -0.52
CNOT9-202ENST00000295701 TAF7LQ5H9L4 462 aa11.78□□□□□ -0.52
CNOT9-202ENST00000295701 ZNF804AQ7Z570 1209 aa11.78□□□□□ -0.52
CNOT9-202ENST00000295701 KAZALD1Q96I82 304 aa11.78□□□□□ -0.52
CNOT9-202ENST00000295701 CFHR5Q9BXR6 569 aa11.78□□□□□ -0.52
CNOT9-202ENST00000295701 CNNM1Q9NRU3 951 aa11.78□□□□□ -0.52
CNOT9-202ENST00000295701 OTOFQ9HC10 1997 aa11.78□□□□□ -0.52
CNOT9-202ENST00000295701 MANSC4A6NHS7 340 aaPredicted RBP11.77□□□□□ -0.53
CNOT9-202ENST00000295701 PPP1R12BO60237 982 aaPredicted RBP11.77□□□□□ -0.53
CNOT9-202ENST00000295701 FKBP1AP62942 108 aaKnown RBP11.77□□□□□ -0.53
CNOT9-202ENST00000295701 RASA3Q14644 834 aa11.77□□□□□ -0.53
CNOT9-202ENST00000295701 SLC4A10Q6U841 1118 aa11.77□□□□□ -0.53
CNOT9-202ENST00000295701 SUCLG2Q96I99 432 aa11.77□□□□□ -0.53
CNOT9-202ENST00000295701 FAM84BQ96KN1 310 aaPredicted RBP11.77□□□□□ -0.53
CNOT9-202ENST00000295701 TDRD3Q9H7E2 651 aaKnown RBP11.77□□□□□ -0.53
CNOT9-202ENST00000295701 COL1A1P02452 1464 aaPredicted RBP11.76□□□□□ -0.53
CNOT9-202ENST00000295701 SUPT20HL1Q3ZLR7 823 aa11.76□□□□□ -0.53
CNOT9-202ENST00000295701 OTOP1Q7RTM1 612 aa11.76□□□□□ -0.53
CNOT9-202ENST00000295701 TDRD7Q8NHU6 1098 aaKnown RBP11.76□□□□□ -0.53
CNOT9-202ENST00000295701 CD99L2Q8TCZ2 262 aa11.76□□□□□ -0.53
CNOT9-202ENST00000295701 PTPN18Q99952 460 aa11.76□□□□□ -0.53
CNOT9-202ENST00000295701 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
CNOT9-202ENST00000295701 ZNF70Q9UC06 446 aaPredicted RBP11.76□□□□□ -0.53
CNOT9-202ENST00000295701 IQSEC3Q9UPP2 1182 aaPredicted RBP11.76□□□□□ -0.53
CNOT9-202ENST00000295701 TRIM17Q9Y577 477 aa11.76□□□□□ -0.53
CNOT9-202ENST00000295701 PPP2R3BQ9Y5P8 575 aa11.76□□□□□ -0.53
CNOT9-202ENST00000295701 FAM205AQ6ZU69 1335 aa11.76□□□□□ -0.53
CNOT9-202ENST00000295701 LAMB1P07942 1786 aa11.76□□□□□ -0.53
CNOT9-202ENST00000295701 BRCA2P51587 3418 aa11.75□□□□□ -0.53
CNOT9-202ENST00000295701 MYO1BO43795 1136 aa11.75□□□□□ -0.53
CNOT9-202ENST00000295701 NBPF7P0C2Y1 421 aaPredicted RBP11.75□□□□□ -0.53
CNOT9-202ENST00000295701 ZBTB48P10074 688 aaPredicted RBP11.75□□□□□ -0.53
CNOT9-202ENST00000295701 HIBADHP31937 336 aaKnown RBP11.75□□□□□ -0.53
CNOT9-202ENST00000295701 CRHR2Q13324 411 aa11.75□□□□□ -0.53
CNOT9-202ENST00000295701 CAMK2BQ13554 666 aa11.75□□□□□ -0.53
CNOT9-202ENST00000295701 MFSD14BQ5SR56 506 aa11.75□□□□□ -0.53
CNOT9-202ENST00000295701 PRPF38BQ5VTL8 546 aaKnown RBP11.75□□□□□ -0.53
CNOT9-202ENST00000295701 ELP3Q9H9T3 547 aa11.75□□□□□ -0.53
CNOT9-202ENST00000295701 TTF2Q9UNY4 1162 aaKnown RBP11.75□□□□□ -0.53
CNOT9-202ENST00000295701 TCP10L2B9ZVM9 353 aa11.74□□□□□ -0.53
CNOT9-202ENST00000295701 HRO43593 1189 aa11.74□□□□□ -0.53
CNOT9-202ENST00000295701 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
CNOT9-202ENST00000295701 IREB2P48200 963 aaKnown RBP11.74□□□□□ -0.53
CNOT9-202ENST00000295701 INHBEP58166 350 aa11.74□□□□□ -0.53
CNOT9-202ENST00000295701 UBE4AQ14139 1066 aa11.74□□□□□ -0.53
CNOT9-202ENST00000295701 LRRC24Q50LG9 513 aa11.74□□□□□ -0.53
CNOT9-202ENST00000295701 DZIP1LQ8IYY4 767 aaKnown RBP11.74□□□□□ -0.53
CNOT9-202ENST00000295701 ZDHHC16Q969W1 377 aa11.74□□□□□ -0.53
CNOT9-202ENST00000295701 TEPSINQ96N21 525 aa11.74□□□□□ -0.53
CNOT9-202ENST00000295701 SRCIN1Q9C0H9 1055 aa11.74□□□□□ -0.53
CNOT9-202ENST00000295701 TMEM39BQ9GZU3 492 aa11.74□□□□□ -0.53
CNOT9-202ENST00000295701 RIPOR2Q9Y4F9 1068 aa11.74□□□□□ -0.53
CNOT9-202ENST00000295701 ALDH1L1O75891 902 aa11.73□□□□□ -0.53
CNOT9-202ENST00000295701 CACNB3P54284 484 aa11.73□□□□□ -0.53
CNOT9-202ENST00000295701 CHAF1AQ13111 956 aaPredicted RBP11.73□□□□□ -0.53
CNOT9-202ENST00000295701 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.73□□□□□ -0.53
CNOT9-202ENST00000295701 ANKRD13AQ8IZ07 590 aa11.73□□□□□ -0.53
CNOT9-202ENST00000295701 FAM9BQ8IZU0 186 aa11.73□□□□□ -0.53
CNOT9-202ENST00000295701 OPTNQ96CV9 577 aa11.73□□□□□ -0.53
CNOT9-202ENST00000295701 BICC1Q9H694 974 aaKnown RBP11.73□□□□□ -0.53
CNOT9-202ENST00000295701 TESPA1A2RU30 521 aaPredicted RBP11.72□□□□□ -0.53
CNOT9-202ENST00000295701 ANP32CO43423 234 aa11.72□□□□□ -0.53
CNOT9-202ENST00000295701 PTPREP23469 700 aa11.72□□□□□ -0.53
CNOT9-202ENST00000295701 CRKP46108 304 aa11.72□□□□□ -0.53
CNOT9-202ENST00000295701 FBXO33Q7Z6M2 555 aa11.72□□□□□ -0.53
CNOT9-202ENST00000295701 ANKRD44Q8N8A2 993 aa11.72□□□□□ -0.53
CNOT9-202ENST00000295701 KLHDC4Q8TBB5 520 aa11.72□□□□□ -0.53
CNOT9-202ENST00000295701 BRI3BPQ8WY22 251 aa11.72□□□□□ -0.53
CNOT9-202ENST00000295701 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
CNOT9-202ENST00000295701 PTPN22Q9Y2R2 807 aa11.72□□□□□ -0.53
CNOT9-202ENST00000295701 ZSWIM8A7E2V4 1837 aa11.72□□□□□ -0.53
CNOT9-202ENST00000295701 ARAP2Q8WZ64 1704 aa11.72□□□□□ -0.53
CNOT9-202ENST00000295701 UNCXA6NJT0 531 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms