RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 ERO1BQ86YB8 467 aa21.51■■□□□ 1.03
TFF3-201ENST00000291525 FAM151AQ8WW52 585 aa21.51■■□□□ 1.03
TFF3-201ENST00000291525 MS4A4AQ96JQ5 239 aa21.51■■□□□ 1.03
TFF3-201ENST00000291525 ZNF341Q9BYN7 854 aa21.51■■□□□ 1.03
TFF3-201ENST00000291525 MTX1Q13505 466 aa21.5■■□□□ 1.03
TFF3-201ENST00000291525 DIXDC1Q155Q3 683 aa21.5■■□□□ 1.03
TFF3-201ENST00000291525 CCDC102BQ68D86 513 aa21.5■■□□□ 1.03
TFF3-201ENST00000291525 ATF7IPQ6VMQ6 1270 aa21.5■■□□□ 1.03
TFF3-201ENST00000291525 PTPN18Q99952 460 aa21.5■■□□□ 1.03
TFF3-201ENST00000291525 MYH2Q9UKX2 1941 aa21.49■■□□□ 1.03
TFF3-201ENST00000291525 TRIM27P14373 513 aa21.49■■□□□ 1.03
TFF3-201ENST00000291525 ARHGEF6Q15052 776 aa21.49■■□□□ 1.03
TFF3-201ENST00000291525 TAF1CQ15572 869 aaPredicted RBP21.49■■□□□ 1.03
TFF3-201ENST00000291525 CDC42EP5Q6NZY7 148 aa21.49■■□□□ 1.03
TFF3-201ENST00000291525 OTOP1Q7RTM1 612 aa21.49■■□□□ 1.03
TFF3-201ENST00000291525 SLF2Q8IX21 1173 aa21.49■■□□□ 1.03
TFF3-201ENST00000291525 CNKSR2Q8WXI2 1034 aa21.49■■□□□ 1.03
TFF3-201ENST00000291525 BRI3BPQ8WY22 251 aa21.49■■□□□ 1.03
TFF3-201ENST00000291525 FRAT1Q92837 279 aaPredicted RBP21.49■■□□□ 1.03
TFF3-201ENST00000291525 ZFYVE28Q9HCC9 887 aa21.49■■□□□ 1.03
TFF3-201ENST00000291525 SNCAIPQ9Y6H5 919 aa21.49■■□□□ 1.03
TFF3-201ENST00000291525 PDS5AQ29RF7 1337 aaKnown RBP21.49■■□□□ 1.03
TFF3-201ENST00000291525 GNAI2P04899 355 aa21.48■■□□□ 1.03
TFF3-201ENST00000291525 CETPP11597 493 aa21.48■■□□□ 1.03
TFF3-201ENST00000291525 SP3Q02447 781 aa21.48■■□□□ 1.03
TFF3-201ENST00000291525 MVPQ14764 893 aaKnown RBP21.48■■□□□ 1.03
TFF3-201ENST00000291525 SPTY2D1Q68D10 685 aaPredicted RBP21.48■■□□□ 1.03
TFF3-201ENST00000291525 USP40Q9NVE5 1235 aa21.48■■□□□ 1.03
TFF3-201ENST00000291525 A0A1B0GUL7 405 aa21.47■■□□□ 1.03
TFF3-201ENST00000291525 ADORA1P30542 326 aa21.47■■□□□ 1.03
TFF3-201ENST00000291525 PPIL2Q13356 520 aa21.47■■□□□ 1.03
TFF3-201ENST00000291525 SNAPC2Q13487 334 aa21.47■■□□□ 1.03
TFF3-201ENST00000291525 DZIP1Q86YF9 867 aaKnown RBP21.47■■□□□ 1.03
TFF3-201ENST00000291525 CD99L2Q8TCZ2 262 aa21.47■■□□□ 1.03
TFF3-201ENST00000291525 ZCCHC17Q9NP64 241 aaKnown RBP21.47■■□□□ 1.03
TFF3-201ENST00000291525 TIMM10P62072 90 aa21.46■■□□□ 1.03
TFF3-201ENST00000291525 TCP10Q12799 353 aa21.46■■□□□ 1.03
TFF3-201ENST00000291525 MIGA2Q7L4E1 593 aa21.46■■□□□ 1.03
TFF3-201ENST00000291525 ZKSCAN4Q969J2 545 aaPredicted RBP21.46■■□□□ 1.03
TFF3-201ENST00000291525 EFCC1Q9HA90 598 aa21.46■■□□□ 1.03
TFF3-201ENST00000291525 BCAR3O75815 825 aa21.45■■□□□ 1.02
TFF3-201ENST00000291525 PPATQ06203 517 aa21.45■■□□□ 1.02
TFF3-201ENST00000291525 TFCP2Q12800 502 aa21.45■■□□□ 1.02
TFF3-201ENST00000291525 RASGRF1Q13972 1273 aa21.45■■□□□ 1.02
TFF3-201ENST00000291525 XAGE2Q96GT9 111 aa21.45■■□□□ 1.02
TFF3-201ENST00000291525 ABCF2Q9UG63 623 aa21.45■■□□□ 1.02
TFF3-201ENST00000291525 DOCK2Q92608 1830 aa21.45■■□□□ 1.02
TFF3-201ENST00000291525 NFIAQ12857 509 aa21.44■■□□□ 1.02
TFF3-201ENST00000291525 GORABQ5T7V8 394 aa21.44■■□□□ 1.02
TFF3-201ENST00000291525 ZKSCAN2Q63HK3 967 aa21.44■■□□□ 1.02
TFF3-201ENST00000291525 CLUAP1Q96AJ1 413 aa21.44■■□□□ 1.02
TFF3-201ENST00000291525 GAKO14976 1311 aa21.44■■□□□ 1.02
TFF3-201ENST00000291525 IRF6O14896 467 aa21.43■■□□□ 1.02
TFF3-201ENST00000291525 G3BP1Q13283 466 aaKnown RBP eCLIP21.43■■□□□ 1.02
TFF3-201ENST00000291525 FAM43AQ8N2R8 423 aa21.43■■□□□ 1.02
TFF3-201ENST00000291525 NEUROD6Q96NK8 337 aa21.43■■□□□ 1.02
TFF3-201ENST00000291525 FAM198AQ9UFP1 575 aa21.43■■□□□ 1.02
TFF3-201ENST00000291525 ZNF112Q9UJU3 913 aa21.43■■□□□ 1.02
TFF3-201ENST00000291525 PTPN22Q9Y2R2 807 aa21.43■■□□□ 1.02
TFF3-201ENST00000291525 PDE4DIPQ5VU43 2346 aa21.43■■□□□ 1.02
TFF3-201ENST00000291525 ENTPD3O75355 529 aa21.42■■□□□ 1.02
TFF3-201ENST00000291525 INPP5BP32019 993 aa21.42■■□□□ 1.02
TFF3-201ENST00000291525 ERICH6Q7L0X2 663 aa21.42■■□□□ 1.02
TFF3-201ENST00000291525 IDI2Q9BXS1 227 aa21.42■■□□□ 1.02
TFF3-201ENST00000291525 BTBD19C9JJ37 291 aa21.41■■□□□ 1.02
TFF3-201ENST00000291525 HNRNPUQ00839 825 aaKnown RBP eCLIP21.41■■□□□ 1.02
TFF3-201ENST00000291525 KIF22Q14807 665 aa21.41■■□□□ 1.02
TFF3-201ENST00000291525 NOL9Q5SY16 702 aaKnown RBP21.41■■□□□ 1.02
TFF3-201ENST00000291525 FAM163AQ96GL9 167 aaPredicted RBP21.41■■□□□ 1.02
TFF3-201ENST00000291525 MROH7-TTC4A0A0A0MT08 1334 aa21.4■■□□□ 1.02
TFF3-201ENST00000291525 TLR2O60603 784 aa21.4■■□□□ 1.02
TFF3-201ENST00000291525 RGS3P49796 1198 aa21.4■■□□□ 1.02
TFF3-201ENST00000291525 ZSCAN29Q8IWY8 852 aaPredicted RBP21.4■■□□□ 1.02
TFF3-201ENST00000291525 TNNQ9UQP3 1299 aa21.4■■□□□ 1.02
TFF3-201ENST00000291525 BTDP43251 543 aa21.39■■□□□ 1.01
TFF3-201ENST00000291525 GSTO1P78417 241 aa21.39■■□□□ 1.01
TFF3-201ENST00000291525 FTSJ3Q8IY81 847 aaKnown RBP21.39■■□□□ 1.01
TFF3-201ENST00000291525 TMEM57Q8N5G2 664 aa21.39■■□□□ 1.01
TFF3-201ENST00000291525 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.39■■□□□ 1.01
TFF3-201ENST00000291525 KCNH4Q9UQ05 1017 aa21.39■■□□□ 1.01
TFF3-201ENST00000291525 PNMA6EA0A0J9YXQ4 647 aa21.38■■□□□ 1.01
TFF3-201ENST00000291525 LDHCP07864 332 aa21.38■■□□□ 1.01
TFF3-201ENST00000291525 UQCRFS1P1P0C7P4 283 aa21.38■■□□□ 1.01
TFF3-201ENST00000291525 SPATA5Q8NB90 893 aa21.38■■□□□ 1.01
TFF3-201ENST00000291525 RBBP6Q7Z6E9 1792 aaKnown RBP21.38■■□□□ 1.01
TFF3-201ENST00000291525 RFX7Q2KHR2 1363 aa21.37■■□□□ 1.01
TFF3-201ENST00000291525 MAP4K4O95819 1239 aaPredicted RBP21.37■■□□□ 1.01
TFF3-201ENST00000291525 ARID4AP29374 1257 aaPredicted RBP21.37■■□□□ 1.01
TFF3-201ENST00000291525 MECOMQ03112 1051 aa21.37■■□□□ 1.01
TFF3-201ENST00000291525 ANKRD23Q86SG2 305 aa21.37■■□□□ 1.01
TFF3-201ENST00000291525 ARMC5Q96C12 935 aa21.37■■□□□ 1.01
TFF3-201ENST00000291525 PICK1Q9NRD5 415 aa21.37■■□□□ 1.01
TFF3-201ENST00000291525 HMG20BQ9P0W2 317 aa21.37■■□□□ 1.01
TFF3-201ENST00000291525 TNRC18O15417 2968 aaPredicted RBP21.37■■□□□ 1.01
TFF3-201ENST00000291525 GNRH1P01148 92 aa21.36■■□□□ 1.01
TFF3-201ENST00000291525 OS9Q13438 667 aaPredicted RBP21.36■■□□□ 1.01
TFF3-201ENST00000291525 NBPF11Q86T75 865 aa21.36■■□□□ 1.01
TFF3-201ENST00000291525 ZFPM1Q8IX07 1006 aa21.36■■□□□ 1.01
TFF3-201ENST00000291525 GPR75-ASB3A0A0A6YYF3 556 aa21.35■■□□□ 1.01
TFF3-201ENST00000291525 CXCL11O14625 94 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms