RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 CEP57L1Q8IYX8 460 aa23.19■■□□□ 1.3
SCUBE1-201ENST00000290460 UBE2Q2Q8WVN8 375 aa23.19■■□□□ 1.3
SCUBE1-201ENST00000290460 ARMT1Q9H993 441 aa23.19■■□□□ 1.3
SCUBE1-201ENST00000290460 DOCK2Q92608 1830 aa23.19■■□□□ 1.3
SCUBE1-201ENST00000290460 PLCH1Q4KWH8 1693 aa23.19■■□□□ 1.3
SCUBE1-201ENST00000290460 SLC5A1P13866 664 aa23.19■■□□□ 1.3
SCUBE1-201ENST00000290460 MARCKSP29966 332 aaPredicted RBP23.19■■□□□ 1.3
SCUBE1-201ENST00000290460 IGDCC4Q8TDY8 1250 aa23.19■■□□□ 1.3
SCUBE1-201ENST00000290460 MPHOSPH8Q99549 860 aa23.19■■□□□ 1.3
SCUBE1-201ENST00000290460 TACC3Q9Y6A5 838 aa23.19■■□□□ 1.3
SCUBE1-201ENST00000290460 CDC25BP30305 580 aa23.18■■□□□ 1.3
SCUBE1-201ENST00000290460 EIF5P55010 431 aaKnown RBP23.18■■□□□ 1.3
SCUBE1-201ENST00000290460 NFXL1Q6ZNB6 911 aa23.18■■□□□ 1.3
SCUBE1-201ENST00000290460 IFNL3Q8IZI9 196 aa23.18■■□□□ 1.3
SCUBE1-201ENST00000290460 MROH7-TTC4A0A0A0MT08 1334 aa23.18■■□□□ 1.3
SCUBE1-201ENST00000290460 DPCR1Q3MIW9 517 aa23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 AXDND1Q5T1B0 1012 aaPredicted RBP23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 KRT40Q6A162 431 aa23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 INTS5Q6P9B9 1019 aaKnown RBP23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 VPS37DQ86XT2 251 aa23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 ACSBG1Q96GR2 724 aa23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 ARID3AQ99856 593 aa23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 LY9Q9HBG7 655 aa23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 COL16A1Q07092 1604 aaPredicted RBP23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 WDHD1O75717 1129 aaPredicted RBP23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 MRFAP1L1Q96HT8 127 aa23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 NAPBQ9H115 298 aa23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 KIAA1468Q9P260 1216 aa23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 WNK3Q9BYP7 1800 aa23.17■■□□□ 1.3
SCUBE1-201ENST00000290460 BIN1O00499 593 aa23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 ZBTB43O43298 467 aa23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 PRKAB2O43741 272 aa23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 RANBP6O60518 1105 aaKnown RBP23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 GTF2F1P35269 517 aaKnown RBP eCLIP23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 TMEM67Q5HYA8 995 aa23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 C16orf45Q96MC5 204 aaPredicted RBP23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 PATL2C9JE40 543 aaKnown RBP23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 ZNF202O95125 648 aa23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 CRKLP46109 303 aaKnown RBP23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 BCAMP50895 628 aa23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 MAP3K12Q12852 859 aa23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 STK11IPQ8N1F8 1099 aa23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 ZSWIM5Q9P217 1185 aa23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 MYH14Q7Z406 1995 aaKnown RBP23.16■■□□□ 1.3
SCUBE1-201ENST00000290460 PFKFB1P16118 471 aa23.15■■□□□ 1.3
SCUBE1-201ENST00000290460 NTRK3Q16288 839 aa23.15■■□□□ 1.3
SCUBE1-201ENST00000290460 TMEM87BQ96K49 555 aa23.15■■□□□ 1.3
SCUBE1-201ENST00000290460 FAM217BQ9NTX9 383 aaPredicted RBP23.15■■□□□ 1.3
SCUBE1-201ENST00000290460 GOLGA8AA7E2F4 631 aa23.15■■□□□ 1.3
SCUBE1-201ENST00000290460 RIOK3O14730 519 aaKnown RBP23.15■■□□□ 1.3
SCUBE1-201ENST00000290460 CDKL5O76039 1030 aa23.15■■□□□ 1.3
SCUBE1-201ENST00000290460 ATP6V1AP38606 617 aa23.15■■□□□ 1.3
SCUBE1-201ENST00000290460 UTP14AQ9BVJ6 771 aaKnown RBP23.15■■□□□ 1.3
SCUBE1-201ENST00000290460 CCDC87Q9NVE4 849 aa23.15■■□□□ 1.3
SCUBE1-201ENST00000290460 PHLPP1O60346 1717 aa23.14■■□□□ 1.3
SCUBE1-201ENST00000290460 LRRC8AQ8IWT6 810 aa23.14■■□□□ 1.29
SCUBE1-201ENST00000290460 GSG1L2A8MUP6 293 aa23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 CHAF1AQ13111 956 aaPredicted RBP23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 GNL2Q13823 731 aaKnown RBP23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 SLC39A14Q15043 492 aa23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 ALX1Q15699 326 aa23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 FILIP1Q7Z7B0 1213 aa23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 ZNF710Q8N1W2 664 aa23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 LCORLQ8N3X6 602 aa23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 NAT10Q9H0A0 1025 aaKnown RBP23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 IFIT3O14879 490 aaKnown RBP23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 PRKCSHP14314 528 aaPredicted RBP23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 IARSP41252 1262 aaKnown RBP23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 RRP12Q5JTH9 1297 aaKnown RBP23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 ZKSCAN3Q9BRR0 538 aa23.13■■□□□ 1.29
SCUBE1-201ENST00000290460 SLC3A2P08195 630 aaKnown RBP23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 CMA1P23946 247 aa23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 ZRSR1Q15695 479 aaKnown RBP23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 CPLX2Q6PUV4 134 aaKnown RBP23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 SGMS1Q86VZ5 419 aa23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 MIGA1Q8NAN2 632 aa23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 AK7Q96M32 723 aa23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 IQSEC3Q9UPP2 1182 aaPredicted RBP23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 COL4A1P02462 1669 aa23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 CAMTA2O94983 1202 aa23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 ISM2Q6H9L7 571 aa23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 MAP7D2Q96T17 732 aa23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 TOMM22Q9NS69 142 aa23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 SLC12A7Q9Y666 1083 aa23.12■■□□□ 1.29
SCUBE1-201ENST00000290460 ITPK1Q13572 414 aa23.11■■□□□ 1.29
SCUBE1-201ENST00000290460 SLC26A6Q9BXS9 759 aa23.11■■□□□ 1.29
SCUBE1-201ENST00000290460 AKNAD1Q5T1N1 836 aa23.11■■□□□ 1.29
SCUBE1-201ENST00000290460 NIP7Q9Y221 180 aaKnown RBP eCLIP23.11■■□□□ 1.29
SCUBE1-201ENST00000290460 TDO2P48775 406 aa23.1■■□□□ 1.29
SCUBE1-201ENST00000290460 SLC4A4Q9Y6R1 1079 aa23.1■■□□□ 1.29
SCUBE1-201ENST00000290460 ROBO1Q9Y6N7 1651 aa23.1■■□□□ 1.29
SCUBE1-201ENST00000290460 LOC102724428A0A0B4J2F2 783 aa23.1■■□□□ 1.29
SCUBE1-201ENST00000290460 CCDC69A6NI79 296 aa23.1■■□□□ 1.29
SCUBE1-201ENST00000290460 ADAMTS2O95450 1211 aa23.1■■□□□ 1.29
SCUBE1-201ENST00000290460 LIFRP42702 1097 aa23.1■■□□□ 1.29
SCUBE1-201ENST00000290460 SIK1P57059 783 aa23.1■■□□□ 1.29
SCUBE1-201ENST00000290460 PTPAQ15257 358 aa23.1■■□□□ 1.29
SCUBE1-201ENST00000290460 CCDC152Q4G0S7 254 aa23.1■■□□□ 1.29
SCUBE1-201ENST00000290460 SHC4Q6S5L8 630 aa23.1■■□□□ 1.29
SCUBE1-201ENST00000290460 MFSD6Q6ZSS7 791 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms