RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 LDHBP07195 334 aaKnown RBP16.65■□□□□ 0.26
PTK7-201ENST00000230418 TSPY3P0CV98 308 aa16.65■□□□□ 0.26
PTK7-201ENST00000230418 TSPY8P0CW00 308 aa16.65■□□□□ 0.26
PTK7-201ENST00000230418 TMC6Q7Z403 805 aa16.65■□□□□ 0.26
PTK7-201ENST00000230418 TPM1P09493 284 aa16.65■□□□□ 0.26
PTK7-201ENST00000230418 ST5P78524 1137 aa16.65■□□□□ 0.26
PTK7-201ENST00000230418 UVSSAQ2YD98 709 aa16.65■□□□□ 0.26
PTK7-201ENST00000230418 CPLX3Q8WVH0 158 aa16.65■□□□□ 0.26
PTK7-201ENST00000230418 PXDNLA1KZ92 1463 aa16.64■□□□□ 0.26
PTK7-201ENST00000230418 KDM4FA0A1W2PPD8 638 aa16.64■□□□□ 0.25
PTK7-201ENST00000230418 GNAT2P19087 354 aa16.64■□□□□ 0.25
PTK7-201ENST00000230418 DIS3L2Q8IYB7 885 aaKnown RBP16.64■□□□□ 0.25
PTK7-201ENST00000230418 MARCH10Q8NA82 808 aaPredicted RBP16.64■□□□□ 0.25
PTK7-201ENST00000230418 ANKRD20A12PQ8NF67 263 aa16.64■□□□□ 0.25
PTK7-201ENST00000230418 TMX1Q9H3N1 280 aa16.64■□□□□ 0.25
PTK7-201ENST00000230418 CBX8Q9HC52 389 aa16.64■□□□□ 0.25
PTK7-201ENST00000230418 DENND2AQ9ULE3 1009 aa16.64■□□□□ 0.25
PTK7-201ENST00000230418 FAM196AQ6ZSG2 479 aa16.64■□□□□ 0.25
PTK7-201ENST00000230418 ZHX3Q9H4I2 956 aa16.64■□□□□ 0.25
PTK7-201ENST00000230418 EIF6P56537 245 aaKnown RBP16.64■□□□□ 0.25
PTK7-201ENST00000230418 ANO1Q5XXA6 986 aa16.64■□□□□ 0.25
PTK7-201ENST00000230418 CRACR2BQ8N4Y2 399 aaPredicted RBP16.64■□□□□ 0.25
PTK7-201ENST00000230418 UTYO14607 1347 aa16.64■□□□□ 0.25
PTK7-201ENST00000230418 CCDC194A0A1B0GVG4 234 aa16.63■□□□□ 0.25
PTK7-201ENST00000230418 TSR1Q2NL82 804 aaKnown RBP16.63■□□□□ 0.25
PTK7-201ENST00000230418 USP42Q9H9J4 1324 aaKnown RBP16.63■□□□□ 0.25
PTK7-201ENST00000230418 ZNF274Q96GC6 653 aaPredicted RBP16.63■□□□□ 0.25
PTK7-201ENST00000230418 CLIC4Q9Y696 253 aa16.63■□□□□ 0.25
PTK7-201ENST00000230418 CCDC96Q2M329 555 aa16.63■□□□□ 0.25
PTK7-201ENST00000230418 HEATR3Q7Z4Q2 680 aa16.63■□□□□ 0.25
PTK7-201ENST00000230418 DHX58Q96C10 678 aa16.63■□□□□ 0.25
PTK7-201ENST00000230418 TMEM87BQ96K49 555 aa16.63■□□□□ 0.25
PTK7-201ENST00000230418 PLIN2Q99541 437 aa16.63■□□□□ 0.25
PTK7-201ENST00000230418 VPS54Q9P1Q0 977 aa16.63■□□□□ 0.25
PTK7-201ENST00000230418 FAM160A1Q05DH4 1040 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 SPTY2D1Q68D10 685 aaPredicted RBP16.62■□□□□ 0.25
PTK7-201ENST00000230418 MAPKAPK5Q8IW41 473 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 CLSTN2Q9H4D0 955 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 CEP131Q9UPN4 1083 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 RIPOR2Q9Y4F9 1068 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 ERVV-1B6SEH8 477 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 PPARAQ07869 468 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 TMTC2Q8N394 836 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 CELF1Q92879 486 aaKnown RBP16.62■□□□□ 0.25
PTK7-201ENST00000230418 CCDC47Q96A33 483 aaKnown RBP16.62■□□□□ 0.25
PTK7-201ENST00000230418 CDK5RAP3Q96JB5 506 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 FBXO3Q9UK99 471 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 LDHCP07864 332 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 ITPK1Q13572 414 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 UBE3CQ15386 1083 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 ZNF174Q15697 407 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 MYSM1Q5VVJ2 828 aa16.62■□□□□ 0.25
PTK7-201ENST00000230418 BTBD18B2RXH4 712 aa16.61■□□□□ 0.25
PTK7-201ENST00000230418 SFPQP23246 707 aaKnown RBP eCLIP16.61■□□□□ 0.25
PTK7-201ENST00000230418 PDE4CQ08493 712 aa16.61■□□□□ 0.25
PTK7-201ENST00000230418 TBC1D10CQ8IV04 446 aa16.61■□□□□ 0.25
PTK7-201ENST00000230418 STAMQ92783 540 aa16.61■□□□□ 0.25
PTK7-201ENST00000230418 ZSWIM5Q9P217 1185 aa16.61■□□□□ 0.25
PTK7-201ENST00000230418 SMTNL1A8MU46 457 aa16.61■□□□□ 0.25
PTK7-201ENST00000230418 STX17P56962 302 aa16.61■□□□□ 0.25
PTK7-201ENST00000230418 NOLC1Q14978 699 aaKnown RBP eCLIP16.61■□□□□ 0.253e-6■■□□□ 14.2
PTK7-201ENST00000230418 CLIC6Q96NY7 704 aa16.61■□□□□ 0.25
PTK7-201ENST00000230418 MSL1Q68DK7 614 aa16.61■□□□□ 0.25
PTK7-201ENST00000230418 APOA5Q6Q788 366 aa16.61■□□□□ 0.25
PTK7-201ENST00000230418 BRAPQ7Z569 592 aa16.6■□□□□ 0.25
PTK7-201ENST00000230418 ANKRD2Q9GZV1 360 aa16.6■□□□□ 0.25
PTK7-201ENST00000230418 SEC63Q9UGP8 760 aaKnown RBP16.6■□□□□ 0.25
PTK7-201ENST00000230418 MCM7P33993 719 aa16.6■□□□□ 0.25
PTK7-201ENST00000230418 TGFBRAP1Q8WUH2 860 aa16.6■□□□□ 0.25
PTK7-201ENST00000230418 UIMC1Q96RL1 719 aa16.6■□□□□ 0.25
PTK7-201ENST00000230418 ZC3H12CQ9C0D7 883 aaKnown RBP16.6■□□□□ 0.25
PTK7-201ENST00000230418 ZNF804AQ7Z570 1209 aa16.6■□□□□ 0.25
PTK7-201ENST00000230418 ZNF654Q8IZM8 581 aa16.6■□□□□ 0.25
PTK7-201ENST00000230418 FBXO18Q8NFZ0 1043 aa16.6■□□□□ 0.25
PTK7-201ENST00000230418 PCDHA7Q9UN72 937 aa16.6■□□□□ 0.25
PTK7-201ENST00000230418 AKAP12Q02952 1782 aa16.6■□□□□ 0.25
PTK7-201ENST00000230418 OVOS2A0A0G2JMS6 1433 aa16.59■□□□□ 0.25
PTK7-201ENST00000230418 TNKSO95271 1327 aa16.59■□□□□ 0.25
PTK7-201ENST00000230418 RPAP1Q9BWH6 1393 aaPredicted RBP16.59■□□□□ 0.25
PTK7-201ENST00000230418 KIF5BP33176 963 aa16.59■□□□□ 0.25
PTK7-201ENST00000230418 TBC1D9BQ66K14 1250 aa16.59■□□□□ 0.25
PTK7-201ENST00000230418 SMARCE1Q969G3 411 aa16.59■□□□□ 0.25
PTK7-201ENST00000230418 CARMIL3Q8ND23 1372 aa16.59■□□□□ 0.25
PTK7-201ENST00000230418 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
PTK7-201ENST00000230418 TRIM37O94972 964 aa16.59■□□□□ 0.25
PTK7-201ENST00000230418 ZNF202O95125 648 aa16.59■□□□□ 0.25
PTK7-201ENST00000230418 TRIM28Q13263 835 aaKnown RBP16.59■□□□□ 0.25
PTK7-201ENST00000230418 STRBPQ96SI9 672 aaKnown RBP16.59■□□□□ 0.25
PTK7-201ENST00000230418 CYB5R4Q7L1T6 521 aa16.58■□□□□ 0.24
PTK7-201ENST00000230418 CCDC112Q8NEF3 446 aa16.58■□□□□ 0.24
PTK7-201ENST00000230418 IFNKQ9P0W0 207 aa16.58■□□□□ 0.24
PTK7-201ENST00000230418 VWA3AA6NCI4 1184 aa16.58■□□□□ 0.24
PTK7-201ENST00000230418 TPM2P07951 284 aa16.58■□□□□ 0.24
PTK7-201ENST00000230418 TNNT1P13805 278 aa16.58■□□□□ 0.24
PTK7-201ENST00000230418 NKX1-1Q15270 411 aaPredicted RBP16.58■□□□□ 0.24
PTK7-201ENST00000230418 FILIP1LQ4L180 1135 aa16.58■□□□□ 0.24
PTK7-201ENST00000230418 TEX11Q8IYF3 940 aa16.58■□□□□ 0.24
PTK7-201ENST00000230418 CPDO75976 1380 aa16.58■□□□□ 0.24
PTK7-201ENST00000230418 CASP7P55210 303 aa16.57■□□□□ 0.24
PTK7-201ENST00000230418 DIXDC1Q155Q3 683 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 1020.8 ms