RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Nol10Q5RJG1 687 aaKnown RBP7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 CtifQ6PEE2 600 aaKnown RBP7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Rnf214Q8BFU3 668 aaKnown RBP7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Dnaaf2Q8BPI1 814 aa7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Fam163bQ8BUM6 167 aa7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Evc2Q8K1G2 1220 aa7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Armcx6Q8K3A6 301 aa7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ginm1Q91WR6 327 aa7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ets1P27577 440 aa7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Bach1P97302 739 aa7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ano10Q8BH79 659 aa7.22□□□□□ -1.25
Lig4-202ENSMUST00000170033 Nup98Q6PFD9 1816 aaKnown RBP7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Casp12O08736 419 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Rgs9O54828 675 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Dync1i1O88485 628 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Prl3d1P18121 224 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Igfbp6P47880 238 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Vps33bP59016 617 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Pcmtd1P59913 357 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Cplx2P84086 134 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ckap2Q3V1H1 664 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Snx13Q6PHS6 957 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Tspan18Q80WR1 248 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ankrd23Q812A3 306 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Rps6kc1Q8BLK9 1056 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Ints5Q8CHT3 1018 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Otud6bQ8K2H2 294 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Nop2Q922K7 793 aaKnown RBP7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Odf2lQ9D478 642 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Setdb1O88974 1307 aa7.21□□□□□ -1.25
Lig4-202ENSMUST00000170033 Zfyve9A2A8R0 1397 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Gm43638A0A0J9YU36 694 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Bcl2l13P59017 434 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Washc4Q3UMB9 1173 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Klra4Q60651 263 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Wasf1Q8R5H6 559 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Bicd2Q921C5 820 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Rrs1Q9CYH6 365 aaKnown RBP7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Tpd52l2Q9CYZ2 220 aaKnown RBP7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Syt10Q9R0N4 523 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 A0A1L1SQF0 893 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Ttc30a2A2AKQ8 664 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Gnat2P50149 354 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Nap1l2P51860 460 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 GnpatP98192 678 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Tmtc2Q56A06 836 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Hook1Q8BIL5 728 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Pms1Q8K119 917 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Edc3Q8K2D3 508 aaKnown RBP7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Ttc30a1Q99J38 664 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Ttc30bQ9CY00 664 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 Ltb4r2Q9JJL9 360 aa7.21□□□□□ -1.26
Lig4-202ENSMUST00000170033 TnksQ6PFX9 1320 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Med23Q80YQ2 1367 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Cnnm2Q3TWN3 875 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Klra5Q60652 266 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 4930504O13RikQ8C5Z9 145 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Tmem259Q8CIV2 574 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 AticQ9CWJ9 592 aaKnown RBP7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 PigbQ9JJQ0 542 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 SufuQ9Z0P7 484 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Ltn1Q6A009 1767 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Myo3bQ1EG27 1305 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Mctp1E9PV86 951 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Myo1aO88329 1043 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 RargP18911 458 aaKnown RBP7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 PsdQ5DTT2 1024 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Kiaa0754Q69ZZ9 979 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Abcf1Q6P542 837 aaKnown RBP7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Slc44a1Q6X893 653 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Sass6Q80UK7 654 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Clca2Q8BG22 942 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Acsbg1Q99PU5 721 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Snw1Q9CSN1 536 aaKnown RBP7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Ifi35Q9D8C4 286 aa7.2□□□□□ -1.26
Lig4-202ENSMUST00000170033 Fer1l6E0CZ42 1862 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Myh15E9Q264 1925 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Prl7a2O54831 253 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Slc4a1P04919 929 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Ptk2P34152 1090 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Usp28Q5I043 1051 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Vps54Q5SPW0 977 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Fbxw10Q5SUS0 1030 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Cep55Q8BT07 462 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Tpcn2Q8BWC0 731 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Golim4Q8BXA1 655 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Robo4Q8C310 1012 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 MycbpQ9EQS3 103 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Dctpp1Q9QY93 170 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Nek3Q9R0A5 511 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 CpdO89001 1377 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Jakmip2D3YXK0 820 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Cyp3a59D3Z2W7 503 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Gm20425E9Q035 978 aaKnown RBP7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Gm29094F6Q785 221 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Ampd3O08739 766 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 SrprbP47758 269 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Ftl2P49945 183 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Foxp1P58462 705 aa7.19□□□□□ -1.26
Lig4-202ENSMUST00000170033 Zkscan4Q5SZT6 480 aa7.19□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms