RNA–Protein interactions for RNA: ENSMUST00000047511.13

Shtn1-201, Transcript of Shootin-1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shtn1, Length 4,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-201ENSMUST00000047511 Knop1Q9Z2Q2 478 aaKnown RBP13.54□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Dip2aQ8BWT5 1523 aa13.54□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Wdr24Q8CFJ9 790 aa13.54□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Zcrb1Q9CZ96 217 aaKnown RBP13.54□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Gm4340L7N2C4 268 aa13.54□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Serpinb6bO08804 377 aa13.54□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Pafah1b1P63005 410 aaKnown RBP13.54□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Dynll1P63168 89 aa13.54□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Dnajc25A2ALW5 357 aa13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Sp4Q62445 782 aa13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Dnaaf4Q8R368 420 aa13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Ankrd1Q9CR42 319 aa13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Tktl2Q9D4D4 627 aa13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Polr2dQ9D7M8 142 aaKnown RBP13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Atp7bQ64446 1462 aa13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Uba5Q8VE47 403 aa13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Ssfa2Q922B9 1252 aa13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Cep112Q5PR68 954 aa13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Cacna2d4Q5RJF7 1116 aa13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Pdcl2Q78Y63 240 aa13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Ccdc122Q8BVN0 290 aa13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Ddx27Q921N6 760 aaKnown RBP13.53□□□□□ -0.24
Shtn1-201ENSMUST00000047511 DnmbpQ6TXD4 1580 aa13.52□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Elmsan1E9Q2I4 1089 aaKnown RBP13.52□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Ssrp1Q08943 708 aaKnown RBP13.52□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Asic1Q6NXK8 526 aa13.52□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Cc2d1bQ8BRN9 848 aa13.52□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Cul5Q9D5V5 780 aa13.52□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Arpp21Q9DCB4 807 aa13.52□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Col4a3bpQ9EQG9 624 aa13.52□□□□□ -0.24
Shtn1-201ENSMUST00000047511 GnaqP21279 359 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Celf1P28659 486 aaKnown RBP13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Jakmip3Q5DTN8 844 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Madcam1Q61826 405 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Zfp251Q6PCX8 632 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Suclg2Q9Z2I8 433 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Nfxl1E9Q8I7 918 aaKnown RBP13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 TrdnE9Q9K5 693 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Gm42641I6L9G2 585 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Copb2O55029 905 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Luc7l2Q7TNC4 392 aaKnown RBP13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Sptlc3Q8BG54 563 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 AtripQ8BMG1 785 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Otud6bQ8K2H2 294 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Eid1Q9DCR4 169 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Chaf1aQ9QWF0 911 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Atp8b3Q6UQ17 1335 aa13.52□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Atp2b1G5E829 1220 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 1700013D24RikQ0P521 120 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Cfap157Q0VFX2 523 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Lrrfip1Q3UZ39 729 aaKnown RBP13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Clic6Q8BHB9 596 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Ftsj3Q9DBE9 838 aaKnown RBP13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Adarb2Q9JI20 745 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Sorbs3Q9R1Z8 733 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Pde11aP0C1Q2 933 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Igfbp6P47880 238 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Nom1Q3UFM5 854 aaKnown RBP13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Ccdc34Q3UI66 367 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Zfp202Q8C879 641 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Ints5Q8CHT3 1018 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Phldb2Q8K1N2 1249 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Vps18Q8R307 973 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Nap1l5Q9JJF0 156 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Kcnh3Q9WVJ0 1095 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Ercc6lQ8BHK9 1240 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Ybx3Q9JKB3 361 aaKnown RBP13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 AmfrQ9R049 643 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Aox1O54754 1333 aa13.51□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Cyp3a57D3YYZ0 503 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 CalrP14211 416 aaKnown RBP13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Gng11P61953 73 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Sparcl1P70663 650 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Rufy1Q8BIJ7 712 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Bola3Q8CEI1 110 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Mylk2Q8VCR8 613 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 FliiQ9JJ28 1271 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Trim30cD3YVI9 513 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Calm1P0DP26 149 aaKnown RBP13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Calm2P0DP27 149 aaKnown RBP13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Calm3P0DP28 149 aaKnown RBP13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Uri1Q3TLD5 531 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Mettl5Q8K1A0 209 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Gtpbp4Q99ME9 634 aaKnown RBP13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Npc1l1Q6T3U4 1333 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Ube4aE9Q735 1028 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Zkscan4Q5SZT6 480 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Zscan22Q8BGS5 496 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Atad2Q8CDM1 1040 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Rnf34Q99KR6 376 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Gja10Q9WUS4 505 aa13.5□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Gm20425E9Q035 978 aaKnown RBP13.49□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Mx1P09922 631 aa13.49□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Usp53P15975 1069 aa13.49□□□□□ -0.25
Shtn1-201ENSMUST00000047511 SrprbP47758 269 aa13.49□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Gm28047Q3US59 414 aa13.49□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Pim2Q62070 370 aa13.49□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Kiaa1024Q8K3V7 917 aa13.49□□□□□ -0.25
Shtn1-201ENSMUST00000047511 AdpgkQ8VDL4 496 aa13.49□□□□□ -0.25
Shtn1-201ENSMUST00000047511 Pde3aQ9Z0X4 1141 aa13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms