RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 SNRPGP15A8MWD9 76 aa10.98□□□□□ -0.65
PDLIM3-213ENST00000629667 F5H768 121 aa10.98□□□□□ -0.65
PDLIM3-213ENST00000629667 FABP1P07148 127 aa10.98□□□□□ -0.65
PDLIM3-213ENST00000629667 SULT1A3P0DMM9 295 aa10.98□□□□□ -0.65
PDLIM3-213ENST00000629667 SULT1A4P0DMN0 295 aa10.98□□□□□ -0.65
PDLIM3-213ENST00000629667 MZT2AQ6P582 158 aa10.98□□□□□ -0.65
PDLIM3-213ENST00000629667 SPATA12Q7Z6I5 190 aa10.98□□□□□ -0.65
PDLIM3-213ENST00000629667 TMEM229BQ8NBD8 167 aa10.98□□□□□ -0.65
PDLIM3-213ENST00000629667 RTBDNQ9BSG5 229 aaPredicted RBP10.98□□□□□ -0.65
PDLIM3-213ENST00000629667 ZNF705GA8MUZ8 300 aaPredicted RBP10.97□□□□□ -0.65
PDLIM3-213ENST00000629667 GABARAPH6UMI1 98 aa10.97□□□□□ -0.65
PDLIM3-213ENST00000629667 GABARAPO95166 117 aa10.97□□□□□ -0.65
PDLIM3-213ENST00000629667 MEOX2P50222 304 aa10.97□□□□□ -0.65
PDLIM3-213ENST00000629667 VBP1P61758 197 aa10.97□□□□□ -0.65
PDLIM3-213ENST00000629667 STEAP1BQ6NZ63 245 aa10.97□□□□□ -0.65
PDLIM3-213ENST00000629667 LGI3Q8N145 548 aa10.97□□□□□ -0.65
PDLIM3-213ENST00000629667 SLC35E1Q96K37 410 aa10.97□□□□□ -0.65
PDLIM3-213ENST00000629667 EXTL2Q9UBQ6 330 aa10.97□□□□□ -0.65
PDLIM3-213ENST00000629667 DNAH5Q8TE73 4624 aa10.96□□□□□ -0.65
PDLIM3-213ENST00000629667 IGKV1D-37A0A075B6S9 117 aa10.96□□□□□ -0.65
PDLIM3-213ENST00000629667 PRM2P04554 102 aa10.96□□□□□ -0.65
PDLIM3-213ENST00000629667 GPX4P36969 197 aaPredicted RBP10.96□□□□□ -0.65
PDLIM3-213ENST00000629667 OR2F1Q13607 317 aa10.96□□□□□ -0.65
PDLIM3-213ENST00000629667 GAMTQ14353 236 aa10.96□□□□□ -0.65
PDLIM3-213ENST00000629667 GPR107Q5VW38 600 aa10.96□□□□□ -0.65
PDLIM3-213ENST00000629667 AMTNQ6UX39 209 aa10.96□□□□□ -0.65
PDLIM3-213ENST00000629667 DTD1Q8TEA8 209 aa10.96□□□□□ -0.65
PDLIM3-213ENST00000629667 C20orf173Q96LM9 149 aa10.96□□□□□ -0.65
PDLIM3-213ENST00000629667 LINC00588Q9Y4M8 146 aa10.96□□□□□ -0.65
PDLIM3-213ENST00000629667 TMEM56-RWDD3S4R434 201 aa10.96□□□□□ -0.65
PDLIM3-213ENST00000629667 CRYM-AS1A6NIL9 109 aa10.95□□□□□ -0.66
PDLIM3-213ENST00000629667 A8MTW9 85 aa10.95□□□□□ -0.66
PDLIM3-213ENST00000629667 INSP01308 110 aa10.95□□□□□ -0.66
PDLIM3-213ENST00000629667 ATP5G1P05496 136 aa10.95□□□□□ -0.66
PDLIM3-213ENST00000629667 GALR1P47211 349 aa10.95□□□□□ -0.66
PDLIM3-213ENST00000629667 ATP5G3P48201 142 aa10.95□□□□□ -0.66
PDLIM3-213ENST00000629667 B2MP61769 119 aa10.95□□□□□ -0.66
PDLIM3-213ENST00000629667 CLINT1Q14677 625 aa10.95□□□□□ -0.66
PDLIM3-213ENST00000629667 SURF2Q15527 256 aaPredicted RBP10.95□□□□□ -0.66
PDLIM3-213ENST00000629667 SPINK13Q1W4C9 94 aa10.95□□□□□ -0.66
PDLIM3-213ENST00000629667 FAAP20Q6NZ36 180 aa10.95□□□□□ -0.66
PDLIM3-213ENST00000629667 OR4C16Q8NGL9 310 aa10.95□□□□□ -0.66
PDLIM3-213ENST00000629667 C15orf40Q8WUR7 153 aa10.95□□□□□ -0.66
PDLIM3-213ENST00000629667 A0A087WXM4 84 aa10.94□□□□□ -0.66
PDLIM3-213ENST00000629667 M0R2Z0 102 aa10.94□□□□□ -0.66
PDLIM3-213ENST00000629667 DUSP14O95147 198 aaKnown RBP10.94□□□□□ -0.66
PDLIM3-213ENST00000629667 TSPOP30536 169 aa10.94□□□□□ -0.66
PDLIM3-213ENST00000629667 CNN1P51911 297 aaKnown RBP10.94□□□□□ -0.66
PDLIM3-213ENST00000629667 ATP5IP56385 69 aaPredicted RBP10.94□□□□□ -0.66
PDLIM3-213ENST00000629667 FCN2Q15485 313 aa10.94□□□□□ -0.66
PDLIM3-213ENST00000629667 AP3S1Q92572 193 aa10.94□□□□□ -0.66
PDLIM3-213ENST00000629667 FUNDC2Q9BWH2 189 aa10.94□□□□□ -0.66
PDLIM3-213ENST00000629667 RBKSQ9H477 322 aa10.94□□□□□ -0.66
PDLIM3-213ENST00000629667 SLC25A22Q9H936 323 aa10.94□□□□□ -0.66
PDLIM3-213ENST00000629667 HSPB7Q9UBY9 170 aa10.94□□□□□ -0.66
PDLIM3-213ENST00000629667 KCNIP3Q9Y2W7 256 aa10.94□□□□□ -0.66
PDLIM3-213ENST00000629667 CBY3A6NI87 242 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 DISC1C4P0D8 188 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 CRXO43186 299 aaPredicted RBP10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 CCR6P51684 374 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 SMCO1Q147U7 214 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 SSX7Q7RTT5 188 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 GPR141Q7Z602 305 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 OR11H7Q8NGC8 314 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 IL22RA2Q969J5 263 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 TRGV9Q99603 122 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 RSG1Q9BU20 258 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 SLC25A32Q9H2D1 315 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 Q9H8V8 135 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 PRR13Q9NZ81 148 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 GPR132Q9UNW8 380 aa10.93□□□□□ -0.66
PDLIM3-213ENST00000629667 HERC1Q15751 4861 aa10.92□□□□□ -0.66
PDLIM3-213ENST00000629667 BAP18Q8IXM2 172 aa10.92□□□□□ -0.66
PDLIM3-213ENST00000629667 RNF141Q8WVD5 230 aa10.92□□□□□ -0.66
PDLIM3-213ENST00000629667 PLAC8L1A1L4L8 177 aa10.91□□□□□ -0.66
PDLIM3-213ENST00000629667 ZNF98A6NK75 572 aa10.91□□□□□ -0.66
PDLIM3-213ENST00000629667 CFDP00746 253 aaPredicted RBP10.91□□□□□ -0.66
PDLIM3-213ENST00000629667 ZNF182P17025 639 aaPredicted RBP10.91□□□□□ -0.66
PDLIM3-213ENST00000629667 AZU1P20160 251 aa10.91□□□□□ -0.66
PDLIM3-213ENST00000629667 RAB11AP62491 216 aa10.91□□□□□ -0.66
PDLIM3-213ENST00000629667 SSBP1Q04837 148 aaKnown RBP10.91□□□□□ -0.66
PDLIM3-213ENST00000629667 TTC32Q5I0X7 151 aa10.91□□□□□ -0.66
PDLIM3-213ENST00000629667 GGNBP1Q5YKI7 109 aa10.91□□□□□ -0.66
PDLIM3-213ENST00000629667 OR1B1Q8NGR6 318 aa10.91□□□□□ -0.66
PDLIM3-213ENST00000629667 TRAV12-2A0A075B6T6 113 aa10.9□□□□□ -0.66
PDLIM3-213ENST00000629667 A0A0B4J2A0 478 aa10.9□□□□□ -0.66
PDLIM3-213ENST00000629667 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.9□□□□□ -0.66
PDLIM3-213ENST00000629667 LYZL2Q7Z4W2 148 aa10.9□□□□□ -0.66
PDLIM3-213ENST00000629667 OR4D5Q8NGN0 318 aa10.9□□□□□ -0.66
PDLIM3-213ENST00000629667 OR1S1Q8NH92 325 aa10.9□□□□□ -0.66
PDLIM3-213ENST00000629667 LINC01587Q99440 93 aa10.9□□□□□ -0.66
PDLIM3-213ENST00000629667 SHPKQ9UHJ6 478 aa10.9□□□□□ -0.66
PDLIM3-213ENST00000629667 PAIP2BQ9ULR5 123 aaKnown RBP10.9□□□□□ -0.66
PDLIM3-213ENST00000629667 SLC45A2Q9UMX9 530 aa10.9□□□□□ -0.66
PDLIM3-213ENST00000629667 IGKV1OR2-108A0A075B7D4 117 aa10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 BOLA2-SMG1P6H3BVE0 249 aa10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 AKAIN1P0CW23 69 aa10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 HTN1P15515 57 aa10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 S100A7P31151 101 aa10.89□□□□□ -0.67
PDLIM3-213ENST00000629667 KRTAP10-2P60368 255 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms