RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 TRGC1P0CF51 173 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 CD28P10747 220 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 MYOD1P15172 320 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 AREGP15514 252 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 FGF7P21781 194 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 RPL29P47914 159 aaKnown RBP4.1□□□□□ -1.75
SHMT1-211ENST00000618902 CDC34P49427 236 aaPredicted RBP4.1□□□□□ -1.75
SHMT1-211ENST00000618902 RAB4BP61018 213 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 RPS16P62249 146 aaKnown RBP4.1□□□□□ -1.75
SHMT1-211ENST00000618902 PAFAH1B2P68402 229 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 CX3CL1P78423 397 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 DEFA6Q01524 100 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 CFHR3Q02985 330 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 POU2AF1Q16633 256 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 C10orf55Q5SWW7 151 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 LCN15Q6UWW0 184 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 LCNL1Q6ZST4 164 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 ZNF329Q86UD4 541 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 HIST3H2BBQ8N257 126 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 VSTM2AQ8TAG5 236 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 OSR1Q8TAX0 266 aaPredicted RBP4.1□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM170AQ8WVE7 144 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 CACNG8Q8WXS5 425 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 DPF1Q92782 380 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 FLYWCH2Q96CP2 140 aaKnown RBP4.1□□□□□ -1.75
SHMT1-211ENST00000618902 UBE2E2Q96LR5 201 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 HARBI1Q96MB7 349 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 UHRF2Q96PU4 802 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 RSG1Q9BU20 258 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 NPCDR1Q9BY65 106 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 ENY2Q9NPA8 101 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 PRNDQ9UKY0 176 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 STAB2Q8WWQ8 2551 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 COL7A1Q02388 2944 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 A0A0G2JLM5 398 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 TCRBV4S1A1TA0A5B7 111 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 CGB1A6NKQ9 187 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 C9JCJ5 164 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 E7EUB6 86 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 ATP6V0E1O15342 81 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 CA2P00918 260 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 CXCL1P09341 107 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 SAA1P0DJI8 122 aaPredicted RBP4.09□□□□□ -1.75
SHMT1-211ENST00000618902 PF4V1P10720 104 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 IAPPP10997 89 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 PSMB8P28062 276 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 MYCNOSP40205 109 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 AKR1C3P42330 323 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 GALR1P47211 349 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 CEBPGP53567 150 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 TAS2R45P59539 299 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 HSPE1P61604 102 aaKnown RBP4.09□□□□□ -1.75
SHMT1-211ENST00000618902 RHOBP62745 196 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 RPL23P62829 140 aaKnown RBP4.09□□□□□ -1.75
SHMT1-211ENST00000618902 ARL16Q0P5N6 197 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 ZNF726P1Q15940 193 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 PRSS8Q16651 343 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 IZUMO4Q1ZYL8 232 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 FFAR4Q5NUL3 377 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 ASPHD1Q5U4P2 390 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 TEPPQ6URK8 271 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 ETV3LQ6ZN32 361 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 PQLC2Q6ZP29 291 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 C18orf65Q6ZTR6 163 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 HAPLN4Q86UW8 402 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 MRPL41Q8IXM3 137 aaKnown RBP4.09□□□□□ -1.75
SHMT1-211ENST00000618902 OR4S2Q8NH73 311 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 ABHD5Q8WTS1 349 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 R3HDM4Q96D70 268 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 SLC35E1Q96K37 410 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 FAM103A1Q9BTL3 118 aaKnown RBP4.09□□□□□ -1.75
SHMT1-211ENST00000618902 CHRDL1Q9BU40 450 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 KLK15Q9H2R5 256 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 PARLQ9H300 379 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 ZNF430Q9H8G1 570 aaPredicted RBP4.09□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM167BQ9NRX6 74 aa4.09□□□□□ -1.75
SHMT1-211ENST00000618902 TGIF2-C20orf24A0A0A6YYL0 155 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 UBE2L5PA0A1B0GUS4 154 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 C11orf94C9JXX5 98 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 PHOX2AO14813 284 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 IGLV1-40P01703 118 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 PF4P02776 101 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 MT-ND6P03923 174 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 OR9G9P0C7N8 305 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 STAG3L2P0CL84 134 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 STAG3L3P0CL85 134 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 CD33P20138 364 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 PPIFP30405 207 aaKnown RBP4.08□□□□□ -1.76
SHMT1-211ENST00000618902 G6PCP35575 357 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 GPX4P36969 197 aaPredicted RBP4.08□□□□□ -1.76
SHMT1-211ENST00000618902 SUB1P53999 127 aaKnown RBP eCLIP4.08□□□□□ -1.76
SHMT1-211ENST00000618902 YPEL3P61236 119 aaPredicted RBP4.08□□□□□ -1.76
SHMT1-211ENST00000618902 RANP62826 216 aaKnown RBP4.08□□□□□ -1.76
SHMT1-211ENST00000618902 ADIRFQ15847 76 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 IQCJQ1A5X6 159 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 PYY3Q5JQD4 70 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 FAM162BQ5T6X4 162 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 SAMD5Q5TGI4 173 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 OR8G2PQ6IF36 304 aa4.08□□□□□ -1.76
SHMT1-211ENST00000618902 OR4A47Q6IF82 309 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms